Goose adenovirus 4

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Aviadenovirus; Goose aviadenovirus A

Average proteome isoelectric point is 6.34

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 34 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|I3PMP4|I3PMP4_9ADEN Protein ORF20A OS=Goose adenovirus 4 OX=1193422 GN=ORF20A PE=4 SV=1
MM1 pKa = 7.78AEE3 pKa = 4.46GGDD6 pKa = 3.53PPRR9 pKa = 11.84PNEE12 pKa = 4.67GEE14 pKa = 4.98DD15 pKa = 3.18IQNDD19 pKa = 3.64MEE21 pKa = 4.91EE22 pKa = 4.17IRR24 pKa = 11.84ALLNDD29 pKa = 3.6INVDD33 pKa = 3.54ANGGDD38 pKa = 3.78EE39 pKa = 4.31DD40 pKa = 4.95EE41 pKa = 5.07EE42 pKa = 4.11MLEE45 pKa = 4.09FDD47 pKa = 5.99DD48 pKa = 4.11MQLMCFTNHH57 pKa = 6.75EE58 pKa = 4.35IVLTPCDD65 pKa = 3.41CHH67 pKa = 5.88QWYY70 pKa = 9.81IRR72 pKa = 11.84DD73 pKa = 3.56FCMSLHH79 pKa = 6.06SCIEE83 pKa = 3.99SSVYY87 pKa = 8.63PTALQLLGDD96 pKa = 4.34DD97 pKa = 5.13PGLCGCYY104 pKa = 9.7FVTSNLGSMFALLNPVFMDD123 pKa = 3.71RR124 pKa = 11.84TIGSSNGVLIAVHH137 pKa = 5.94EE138 pKa = 4.48NNRR141 pKa = 11.84HH142 pKa = 4.18VFLGALCSVAEE153 pKa = 4.46MGTMPCEE160 pKa = 3.88YY161 pKa = 9.09MRR163 pKa = 11.84LVMMVGEE170 pKa = 4.49RR171 pKa = 11.84RR172 pKa = 11.84VSMSCPRR179 pKa = 11.84WMYY182 pKa = 10.77YY183 pKa = 9.92FVQLMSHH190 pKa = 7.27FYY192 pKa = 10.85YY193 pKa = 10.09DD194 pKa = 3.61TVDD197 pKa = 4.32KK198 pKa = 10.54LTGLNN203 pKa = 3.61

Molecular weight: 23.0 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|I3PMN2|I3PMN2_9ADEN Core protein pX OS=Goose adenovirus 4 OX=1193422 GN=pX PE=4 SV=1
MM1 pKa = 7.74SILISPSDD9 pKa = 3.51NRR11 pKa = 11.84GWGTMMRR18 pKa = 11.84RR19 pKa = 11.84SRR21 pKa = 11.84SRR23 pKa = 11.84STMRR27 pKa = 11.84RR28 pKa = 11.84RR29 pKa = 11.84PAMRR33 pKa = 11.84GTGVRR38 pKa = 11.84RR39 pKa = 11.84RR40 pKa = 11.84IRR42 pKa = 11.84RR43 pKa = 11.84ALTAAPMTIRR53 pKa = 11.84RR54 pKa = 11.84LLGLGRR60 pKa = 11.84RR61 pKa = 11.84RR62 pKa = 11.84LPRR65 pKa = 11.84TGSRR69 pKa = 11.84TTLVAVTSTRR79 pKa = 11.84RR80 pKa = 11.84RR81 pKa = 11.84RR82 pKa = 11.84RR83 pKa = 11.84RR84 pKa = 3.19

Molecular weight: 9.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

34

0

34

13135

46

1270

386.3

43.65

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.71 ± 0.391

1.979 ± 0.223

5.489 ± 0.256

5.832 ± 0.652

4.537 ± 0.259

5.908 ± 0.313

2.101 ± 0.197

6.007 ± 0.306

4.72 ± 0.459

7.773 ± 0.326

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.099 ± 0.207

5.367 ± 0.487

5.443 ± 0.377

3.662 ± 0.256

5.969 ± 0.526

8.816 ± 0.444

5.961 ± 0.302

6.349 ± 0.393

1.363 ± 0.097

3.913 ± 0.266
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski