Kuraishia capsulata CBS 1993

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetales incertae sedis; Kuraishia; Kuraishia capsulata

Average proteome isoelectric point is 6.32

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6027 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W6MNM3|W6MNM3_9ASCO Uncharacterized protein OS=Kuraishia capsulata CBS 1993 OX=1382522 GN=KUCA_T00002625001 PE=4 SV=1
MM1 pKa = 7.91PYY3 pKa = 10.81DD4 pKa = 4.38DD5 pKa = 6.03DD6 pKa = 7.31DD7 pKa = 4.5YY8 pKa = 12.04VDD10 pKa = 5.04YY11 pKa = 11.38EE12 pKa = 4.37NEE14 pKa = 4.54DD15 pKa = 3.52YY16 pKa = 11.24DD17 pKa = 4.8DD18 pKa = 4.58SEE20 pKa = 4.49FVEE23 pKa = 5.74DD24 pKa = 4.21NLNDD28 pKa = 3.3EE29 pKa = 5.54DD30 pKa = 4.37YY31 pKa = 11.58ALLYY35 pKa = 7.62EE36 pKa = 4.44TLPVLKK42 pKa = 10.41DD43 pKa = 3.14QLGDD47 pKa = 3.74YY48 pKa = 10.93NSDD51 pKa = 3.4IQDD54 pKa = 3.46EE55 pKa = 4.2DD56 pKa = 3.97LKK58 pKa = 11.49AVLYY62 pKa = 10.1YY63 pKa = 11.11NYY65 pKa = 10.52FEE67 pKa = 4.58VDD69 pKa = 2.9NALAEE74 pKa = 4.11IRR76 pKa = 11.84SKK78 pKa = 10.88FKK80 pKa = 10.67RR81 pKa = 11.84KK82 pKa = 9.44RR83 pKa = 11.84GKK85 pKa = 9.72FDD87 pKa = 3.75SVFSRR92 pKa = 11.84LFDD95 pKa = 4.01FSFDD99 pKa = 3.76SPGICVDD106 pKa = 3.41

Molecular weight: 12.6 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W6MW16|W6MW16_9ASCO Histone H2B OS=Kuraishia capsulata CBS 1993 OX=1382522 GN=KUCA_T00002754001 PE=3 SV=1
MM1 pKa = 6.81YY2 pKa = 8.09WKK4 pKa = 10.13PYY6 pKa = 8.95TDD8 pKa = 4.23LDD10 pKa = 4.33RR11 pKa = 11.84SFSWVFCSSHH21 pKa = 6.95SCFFWWFWQLSPSPALQMQALPRR44 pKa = 11.84KK45 pKa = 8.38WRR47 pKa = 11.84ILKK50 pKa = 9.62PCTNVTGKK58 pKa = 8.58TGRR61 pKa = 11.84KK62 pKa = 8.34YY63 pKa = 10.76RR64 pKa = 11.84NGDD67 pKa = 3.18RR68 pKa = 11.84GPFVLLQLRR77 pKa = 11.84LFSLFLHH84 pKa = 6.46IWSSRR89 pKa = 11.84TCQSNMQGLSRR100 pKa = 11.84TQSSMHH106 pKa = 6.24LPP108 pKa = 3.67

Molecular weight: 12.9 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6027

0

6027

2778337

10

4949

461.0

51.63

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.747 ± 0.029

1.194 ± 0.011

5.878 ± 0.023

6.783 ± 0.034

4.47 ± 0.02

5.778 ± 0.031

2.039 ± 0.012

5.674 ± 0.017

6.407 ± 0.026

9.735 ± 0.032

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.128 ± 0.011

4.379 ± 0.019

4.673 ± 0.023

3.826 ± 0.022

4.848 ± 0.023

8.943 ± 0.033

5.594 ± 0.02

6.566 ± 0.022

1.124 ± 0.01

3.208 ± 0.016
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski