Lutibacter agarilyticus

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Lutibacter

Average proteome isoelectric point is 6.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3391 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A238W4H5|A0A238W4H5_9FLAO Por secretion system C-terminal sorting domain-containing protein OS=Lutibacter agarilyticus OX=1109740 GN=SAMN06265371_102409 PE=4 SV=1
MM1 pKa = 7.44LKK3 pKa = 10.28SIKK6 pKa = 10.15LAILGCFFIIPLYY19 pKa = 10.65AQTTIDD25 pKa = 3.68SFDD28 pKa = 3.74FEE30 pKa = 4.99SGIEE34 pKa = 4.15GWSQSAMDD42 pKa = 5.21DD43 pKa = 3.37FDD45 pKa = 6.84LIRR48 pKa = 11.84QSEE51 pKa = 4.45GTPSNNTGPNTASSGNFYY69 pKa = 10.19MFAEE73 pKa = 4.41MSSPRR78 pKa = 11.84EE79 pKa = 4.2SGDD82 pKa = 3.43SAIFTSPVIDD92 pKa = 4.02LSGYY96 pKa = 6.51MQPTFSFDD104 pKa = 3.19YY105 pKa = 10.91HH106 pKa = 6.27MYY108 pKa = 9.96SSNSISDD115 pKa = 3.55VGTLALEE122 pKa = 4.13INEE125 pKa = 4.93NNTGWQSTSFSLTGSQNYY143 pKa = 9.61DD144 pKa = 2.7QDD146 pKa = 3.06TWLPGLVDD154 pKa = 4.18LLAYY158 pKa = 10.14QGSSVQFRR166 pKa = 11.84FVITRR171 pKa = 11.84ANTWQGDD178 pKa = 3.64IAFDD182 pKa = 4.2NITIEE187 pKa = 4.12GTALVAGVEE196 pKa = 4.35IYY198 pKa = 10.73VAGNGFEE205 pKa = 4.42IPTGTTAISITNGTDD220 pKa = 3.5FGGVNLASSSVAQTFTIEE238 pKa = 3.73NWGLDD243 pKa = 3.51DD244 pKa = 5.67LVLNNSPYY252 pKa = 10.86VSITGADD259 pKa = 3.23AGHH262 pKa = 6.44FSIDD266 pKa = 3.56VASTTSPITSANSTTFQVTFSPLSLGTKK294 pKa = 8.1TATIQISNNDD304 pKa = 3.53TDD306 pKa = 3.49EE307 pKa = 4.28GLYY310 pKa = 10.59SFNVQGTGVQNFFDD324 pKa = 3.94SDD326 pKa = 3.43GDD328 pKa = 4.21GVFDD332 pKa = 5.57HH333 pKa = 7.4VDD335 pKa = 3.1IDD337 pKa = 4.2DD338 pKa = 5.31DD339 pKa = 4.5NDD341 pKa = 3.81GVLDD345 pKa = 4.03ALEE348 pKa = 4.46EE349 pKa = 4.4SACKK353 pKa = 10.16SSSISVPANYY363 pKa = 10.13KK364 pKa = 10.07FLNEE368 pKa = 4.26TFGTLAPGARR378 pKa = 11.84TTINTSYY385 pKa = 11.18NATTTYY391 pKa = 10.21CYY393 pKa = 10.62EE394 pKa = 4.09EE395 pKa = 5.24GIGTGSSCGSTWILDD410 pKa = 3.56DD411 pKa = 3.85GEE413 pKa = 4.6YY414 pKa = 10.99VVVSKK419 pKa = 9.77ITGTDD424 pKa = 2.8TADD427 pKa = 3.74PDD429 pKa = 4.4NIHH432 pKa = 7.32GDD434 pKa = 3.93LAWTNVLDD442 pKa = 3.83HH443 pKa = 6.64TADD446 pKa = 4.21DD447 pKa = 4.63GDD449 pKa = 3.99TGGMAVFNAAWDD461 pKa = 3.79PGVFYY466 pKa = 8.25EE467 pKa = 4.39TTITGILPNVPITYY481 pKa = 10.16SFWVLNIMAEE491 pKa = 4.38SKK493 pKa = 10.8FPGSILPNVTVQFVDD508 pKa = 3.56LFGNIITSIDD518 pKa = 3.07TGEE521 pKa = 4.35FGRR524 pKa = 11.84CASGVNDD531 pKa = 3.71NSCTANEE538 pKa = 4.18WQNFTRR544 pKa = 11.84DD545 pKa = 4.22DD546 pKa = 3.62IVLGNVDD553 pKa = 3.38KK554 pKa = 11.12FIVRR558 pKa = 11.84FINNAPGGAGNDD570 pKa = 3.6LALDD574 pKa = 5.07DD575 pKa = 4.62IVISQTLCDD584 pKa = 4.11KK585 pKa = 11.22DD586 pKa = 3.83SDD588 pKa = 4.15GVADD592 pKa = 5.14VFDD595 pKa = 5.59LDD597 pKa = 4.35SDD599 pKa = 3.9NDD601 pKa = 4.68GIPDD605 pKa = 3.69VVEE608 pKa = 4.31SGLGIISLGTAKK620 pKa = 10.25IPFPSGWVDD629 pKa = 3.29ANGNGMHH636 pKa = 7.39DD637 pKa = 3.43AAEE640 pKa = 4.41SNVILDD646 pKa = 4.02SDD648 pKa = 4.21SDD650 pKa = 3.88GTPNYY655 pKa = 10.53LDD657 pKa = 5.09LDD659 pKa = 4.05SDD661 pKa = 3.76NDD663 pKa = 4.67GIFDD667 pKa = 3.74VDD669 pKa = 3.32EE670 pKa = 4.83SGAGNTANATFQNGDD685 pKa = 3.08GDD687 pKa = 3.46ISGNGVGQGPDD698 pKa = 2.89TDD700 pKa = 4.1YY701 pKa = 11.49VRR703 pKa = 11.84EE704 pKa = 3.97TDD706 pKa = 3.81YY707 pKa = 11.64EE708 pKa = 4.38SDD710 pKa = 3.24GTLEE714 pKa = 4.05YY715 pKa = 9.41FTDD718 pKa = 5.91GILDD722 pKa = 3.59VYY724 pKa = 11.24DD725 pKa = 3.96YY726 pKa = 11.48FNGSTFEE733 pKa = 3.92TAYY736 pKa = 10.66GNEE739 pKa = 4.02NQGVGNTYY747 pKa = 10.73YY748 pKa = 11.28VLDD751 pKa = 4.37SDD753 pKa = 5.12ADD755 pKa = 4.41GIPDD759 pKa = 3.75YY760 pKa = 11.02MDD762 pKa = 3.21VTSDD766 pKa = 3.26GVTFDD771 pKa = 4.11ISHH774 pKa = 6.79TLYY777 pKa = 11.34ANLDD781 pKa = 3.58ADD783 pKa = 3.9NDD785 pKa = 4.91GIIDD789 pKa = 3.91DD790 pKa = 4.59TNDD793 pKa = 3.32SEE795 pKa = 5.17GDD797 pKa = 3.93GIVDD801 pKa = 5.67LFDD804 pKa = 4.26TDD806 pKa = 4.81DD807 pKa = 3.77SAFGSPRR814 pKa = 11.84DD815 pKa = 3.87LDD817 pKa = 3.63RR818 pKa = 11.84CLNLYY823 pKa = 10.45FDD825 pKa = 4.47GRR827 pKa = 11.84NDD829 pKa = 3.55YY830 pKa = 11.49AEE832 pKa = 4.67DD833 pKa = 3.64SAVINAWGEE842 pKa = 3.83ATMMCWIKK850 pKa = 10.05MDD852 pKa = 4.37PASAGIQHH860 pKa = 7.02IMGQNEE866 pKa = 3.88FNIQLNANKK875 pKa = 9.21TISAHH880 pKa = 6.65ASGNTLNYY888 pKa = 7.67STPLNVNQWVHH899 pKa = 5.82IATSYY904 pKa = 11.02SSLNNEE910 pKa = 3.71FKK912 pKa = 11.13LFINGEE918 pKa = 4.14EE919 pKa = 4.06IAIEE923 pKa = 4.14TGVSGALSADD933 pKa = 3.22TSLFTIGKK941 pKa = 9.26LPGVNSNFYY950 pKa = 10.05HH951 pKa = 7.02GYY953 pKa = 7.7IDD955 pKa = 3.7EE956 pKa = 4.12VRR958 pKa = 11.84VFNKK962 pKa = 10.31ALSNNEE968 pKa = 3.76LQKK971 pKa = 10.42IVYY974 pKa = 9.33QEE976 pKa = 3.85IEE978 pKa = 4.15NNGGIVRR985 pKa = 11.84GSIIPMNVTNFIDD998 pKa = 4.02EE999 pKa = 4.42DD1000 pKa = 4.67TVTPLDD1006 pKa = 3.24WTYY1009 pKa = 10.56LQRR1012 pKa = 11.84YY1013 pKa = 8.32FKK1015 pKa = 10.27MDD1017 pKa = 3.17VYY1019 pKa = 11.09KK1020 pKa = 10.94DD1021 pKa = 4.54DD1022 pKa = 5.66IIDD1025 pKa = 4.38DD1026 pKa = 4.5LSTPAVDD1033 pKa = 3.67VGAGATIYY1041 pKa = 10.82NMKK1044 pKa = 10.33IIDD1047 pKa = 4.05VQTAPLPFVTNQTGTLPTAVNHH1069 pKa = 6.77TINGVNGNDD1078 pKa = 3.61AIAYY1082 pKa = 7.47DD1083 pKa = 3.63WSIVNILHH1091 pKa = 7.27DD1092 pKa = 3.74AVYY1095 pKa = 10.0YY1096 pKa = 11.02NNYY1099 pKa = 9.02QKK1101 pKa = 10.93HH1102 pKa = 6.29LGLIVNNLDD1111 pKa = 3.62AGSNPIEE1118 pKa = 4.12YY1119 pKa = 10.23SIQNNSEE1126 pKa = 4.63LNVSWYY1132 pKa = 10.84LKK1134 pKa = 10.65LDD1136 pKa = 3.44GFIDD1140 pKa = 4.81LEE1142 pKa = 4.65GEE1144 pKa = 4.23SQLVQGAEE1152 pKa = 4.12SVLDD1156 pKa = 4.03EE1157 pKa = 5.28DD1158 pKa = 3.94SVGYY1162 pKa = 10.08IEE1164 pKa = 5.79QDD1166 pKa = 3.28QQGTQSSYY1174 pKa = 11.42NYY1176 pKa = 9.54NYY1178 pKa = 8.85WSSSVSPIAAGAGTNNTSNTISEE1201 pKa = 4.37VLFDD1205 pKa = 3.68GTIANNPAAINFQPEE1220 pKa = 3.71HH1221 pKa = 5.63TAADD1225 pKa = 4.0GAVTSPITLSSYY1237 pKa = 9.23WLYY1240 pKa = 10.68TFNGLDD1246 pKa = 3.25NDD1248 pKa = 3.96YY1249 pKa = 10.72NSWVSIDD1256 pKa = 3.83EE1257 pKa = 4.58DD1258 pKa = 4.35SSVLAGEE1265 pKa = 5.26GYY1267 pKa = 8.83TMKK1270 pKa = 10.02GTSGVAAIIDD1280 pKa = 3.57NQNYY1284 pKa = 7.78VFKK1287 pKa = 10.64GKK1289 pKa = 8.78PHH1291 pKa = 6.58NGDD1294 pKa = 2.75ITLSIALNDD1303 pKa = 3.35NRR1305 pKa = 11.84LVGNPYY1311 pKa = 10.33SSAMDD1316 pKa = 3.7ANAFILDD1323 pKa = 4.34NISDD1327 pKa = 3.96SGGNAATNVFNGALYY1342 pKa = 10.11FWDD1345 pKa = 3.84HH1346 pKa = 6.49FSGHH1350 pKa = 4.66THH1352 pKa = 5.5VLSEE1356 pKa = 4.23YY1357 pKa = 8.87VGGYY1361 pKa = 7.79ATYY1364 pKa = 10.3TLMGGAKK1371 pKa = 9.83AYY1373 pKa = 10.69ANDD1376 pKa = 4.07EE1377 pKa = 4.43RR1378 pKa = 11.84IQNNGSSGVKK1388 pKa = 9.86VPEE1391 pKa = 3.94RR1392 pKa = 11.84YY1393 pKa = 9.69IPVNQGFFVNASLDD1407 pKa = 3.85TVSNSISTSVTGGAVIFKK1425 pKa = 10.04NSQRR1429 pKa = 11.84VCVTEE1434 pKa = 3.78NSGNSVFLKK1443 pKa = 10.13SAHH1446 pKa = 6.21SKK1448 pKa = 8.2EE1449 pKa = 4.38TTKK1452 pKa = 10.84QLVVEE1457 pKa = 4.25EE1458 pKa = 4.27DD1459 pKa = 3.29TRR1461 pKa = 11.84SKK1463 pKa = 11.02VRR1465 pKa = 11.84LLFKK1469 pKa = 10.9SPTGYY1474 pKa = 10.22EE1475 pKa = 3.86RR1476 pKa = 11.84QLLVGADD1483 pKa = 3.66ANASANFDD1491 pKa = 3.48LGYY1494 pKa = 10.81DD1495 pKa = 3.77GFLIEE1500 pKa = 6.2DD1501 pKa = 3.79NVADD1505 pKa = 4.15MFWAFSDD1512 pKa = 3.41AKK1514 pKa = 10.47FVIQAVDD1521 pKa = 3.45TFKK1524 pKa = 11.11LDD1526 pKa = 3.38QEE1528 pKa = 4.52LKK1530 pKa = 9.22IGLRR1534 pKa = 11.84IEE1536 pKa = 4.28SAGIASISIDD1546 pKa = 3.33TLEE1549 pKa = 4.91NIDD1552 pKa = 3.97EE1553 pKa = 4.4GFEE1556 pKa = 4.71LFIHH1560 pKa = 7.64DD1561 pKa = 4.34NLTGKK1566 pKa = 10.29NYY1568 pKa = 10.58DD1569 pKa = 3.54IIKK1572 pKa = 10.48NSAEE1576 pKa = 3.52IHH1578 pKa = 6.13LEE1580 pKa = 3.63PGEE1583 pKa = 4.02YY1584 pKa = 8.81MDD1586 pKa = 5.48RR1587 pKa = 11.84FDD1589 pKa = 5.18VRR1591 pKa = 11.84FKK1593 pKa = 11.27AEE1595 pKa = 3.74KK1596 pKa = 8.69TLSVEE1601 pKa = 4.71NEE1603 pKa = 3.45AALNGIHH1610 pKa = 6.3VFVNNSSNEE1619 pKa = 3.92LQIKK1623 pKa = 8.04NTLNTEE1629 pKa = 3.65IKK1631 pKa = 9.53TICLYY1636 pKa = 11.06NSLGQLQHH1644 pKa = 6.31KK1645 pKa = 6.32WQKK1648 pKa = 10.39NLEE1651 pKa = 4.11NAQISLPVNNKK1662 pKa = 8.75VPGMYY1667 pKa = 10.42LVQVKK1672 pKa = 9.49TNTGLFNKK1680 pKa = 9.87KK1681 pKa = 10.44VIVNN1685 pKa = 4.18

Molecular weight: 182.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A238X0K8|A0A238X0K8_9FLAO PAS domain S-box-containing protein OS=Lutibacter agarilyticus OX=1109740 GN=SAMN06265371_104269 PE=4 SV=1
MM1 pKa = 7.18EE2 pKa = 5.73ALVKK6 pKa = 9.95FIQDD10 pKa = 3.17EE11 pKa = 4.5FVTKK15 pKa = 10.64KK16 pKa = 10.25EE17 pKa = 4.12FPQFQAGDD25 pKa = 4.11TITVYY30 pKa = 11.01YY31 pKa = 9.37EE32 pKa = 3.62IKK34 pKa = 10.3EE35 pKa = 4.28GEE37 pKa = 4.02KK38 pKa = 9.87TRR40 pKa = 11.84TQFFRR45 pKa = 11.84GVVIQRR51 pKa = 11.84RR52 pKa = 11.84GTGSSEE58 pKa = 3.8TFTIRR63 pKa = 11.84KK64 pKa = 7.76MSGTVGVEE72 pKa = 3.69RR73 pKa = 11.84IFPVNLPAIQKK84 pKa = 9.91IEE86 pKa = 4.02VNKK89 pKa = 9.73QGRR92 pKa = 11.84VRR94 pKa = 11.84RR95 pKa = 11.84ARR97 pKa = 11.84IFYY100 pKa = 10.34FRR102 pKa = 11.84GLTGKK107 pKa = 10.04KK108 pKa = 10.2ARR110 pKa = 11.84IQEE113 pKa = 3.94RR114 pKa = 11.84RR115 pKa = 11.84RR116 pKa = 3.43

Molecular weight: 13.59 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3391

0

3391

1235752

26

3453

364.4

41.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.136 ± 0.038

0.759 ± 0.015

5.311 ± 0.036

6.735 ± 0.038

5.26 ± 0.033

6.379 ± 0.041

1.704 ± 0.017

8.298 ± 0.041

8.075 ± 0.051

9.07 ± 0.045

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.11 ± 0.02

6.648 ± 0.041

3.35 ± 0.026

3.143 ± 0.02

3.036 ± 0.027

6.507 ± 0.034

5.911 ± 0.045

6.286 ± 0.035

1.129 ± 0.016

4.151 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski