Chimpanzee associated porprismacovirus 2

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus

Average proteome isoelectric point is 7.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D2WKE9|D2WKE9_9VIRU Putative replicase protein OS=Chimpanzee associated porprismacovirus 2 OX=2170110 GN=rep PE=4 SV=1
MM1 pKa = 7.45HH2 pKa = 7.8LFTEE6 pKa = 4.83VVSVDD11 pKa = 3.23IMTTMQRR18 pKa = 11.84THH20 pKa = 6.13TNAEE24 pKa = 4.22LIRR27 pKa = 11.84WFKK30 pKa = 10.53IFRR33 pKa = 11.84DD34 pKa = 3.64LDD36 pKa = 3.17IHH38 pKa = 6.15KK39 pKa = 9.68WVIGLEE45 pKa = 4.11EE46 pKa = 4.29GKK48 pKa = 10.53GGYY51 pKa = 7.67GHH53 pKa = 6.29WQVRR57 pKa = 11.84CNIRR61 pKa = 11.84VEE63 pKa = 4.38VVNDD67 pKa = 3.09WTAYY71 pKa = 9.53LRR73 pKa = 11.84AVFSWLGPISIWTEE87 pKa = 3.84EE88 pKa = 4.25CSDD91 pKa = 3.29KK92 pKa = 10.49YY93 pKa = 9.64TYY95 pKa = 7.33EE96 pKa = 4.28TKK98 pKa = 10.41EE99 pKa = 3.76GRR101 pKa = 11.84YY102 pKa = 6.08WASWDD107 pKa = 3.46TMGARR112 pKa = 11.84QQRR115 pKa = 11.84FGKK118 pKa = 9.08MRR120 pKa = 11.84WNQEE124 pKa = 3.52GAVQALQRR132 pKa = 11.84TNDD135 pKa = 3.34RR136 pKa = 11.84EE137 pKa = 4.07IVVWYY142 pKa = 9.93DD143 pKa = 3.11EE144 pKa = 4.06QGNMGKK150 pKa = 9.22SWLCGHH156 pKa = 7.23LFEE159 pKa = 5.62TGQAYY164 pKa = 8.57YY165 pKa = 9.68IPPYY169 pKa = 7.6MTSIQSMIQTVASLVLQDD187 pKa = 4.59RR188 pKa = 11.84DD189 pKa = 3.05SGYY192 pKa = 9.92PPRR195 pKa = 11.84PLIVIDD201 pKa = 5.23IPRR204 pKa = 11.84SWKK207 pKa = 9.63WSTEE211 pKa = 3.64LYY213 pKa = 9.64TAIEE217 pKa = 4.54AIKK220 pKa = 10.41DD221 pKa = 3.74GLIMDD226 pKa = 4.67PRR228 pKa = 11.84YY229 pKa = 9.71GARR232 pKa = 11.84PVNIHH237 pKa = 6.31GIKK240 pKa = 10.53VIVLTNTKK248 pKa = 9.98PKK250 pKa = 10.2LDD252 pKa = 3.97KK253 pKa = 10.88LSEE256 pKa = 4.3DD257 pKa = 2.82RR258 pKa = 11.84WVLYY262 pKa = 10.96DD263 pKa = 3.65PMDD266 pKa = 3.94YY267 pKa = 11.48PMMLL271 pKa = 3.63

Molecular weight: 31.86 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D2WKE5|D2WKE5_9VIRU ORF3 OS=Chimpanzee associated porprismacovirus 2 OX=2170110 PE=4 SV=1
MM1 pKa = 7.83SIRR4 pKa = 11.84IKK6 pKa = 10.46IPQVLIKK13 pKa = 10.39GCPRR17 pKa = 11.84RR18 pKa = 11.84PLEE21 pKa = 3.62YY22 pKa = 10.61AFVYY26 pKa = 10.45GSGISGHH33 pKa = 6.23NDD35 pKa = 2.67NNAKK39 pKa = 10.21DD40 pKa = 3.62AYY42 pKa = 9.37QRR44 pKa = 11.84RR45 pKa = 11.84ANPLVQNLPRR55 pKa = 11.84SRR57 pKa = 11.84YY58 pKa = 7.66PQMGHH63 pKa = 6.47RR64 pKa = 11.84AGGRR68 pKa = 11.84QRR70 pKa = 11.84RR71 pKa = 11.84IRR73 pKa = 11.84TLAGQMQYY81 pKa = 10.62PGRR84 pKa = 11.84SGQRR88 pKa = 11.84LDD90 pKa = 4.67SIPKK94 pKa = 10.25GSILMARR101 pKa = 11.84TNLDD105 pKa = 3.03LDD107 pKa = 3.39RR108 pKa = 11.84GMFRR112 pKa = 11.84QVHH115 pKa = 5.86LRR117 pKa = 11.84DD118 pKa = 3.15QGRR121 pKa = 11.84QVLGIMGYY129 pKa = 10.48DD130 pKa = 3.52GSEE133 pKa = 3.87TTAVRR138 pKa = 11.84EE139 pKa = 4.08NEE141 pKa = 3.85MEE143 pKa = 4.01PRR145 pKa = 11.84RR146 pKa = 11.84GRR148 pKa = 11.84ASPTTDD154 pKa = 2.75EE155 pKa = 4.55RR156 pKa = 11.84PRR158 pKa = 11.84DD159 pKa = 3.59SGLVRR164 pKa = 11.84RR165 pKa = 11.84TRR167 pKa = 11.84QHH169 pKa = 4.86GQIVALRR176 pKa = 11.84APIRR180 pKa = 11.84DD181 pKa = 3.48RR182 pKa = 11.84AGLLHH187 pKa = 6.06TAVHH191 pKa = 6.94DD192 pKa = 3.6EE193 pKa = 4.27HH194 pKa = 6.69TKK196 pKa = 10.11HH197 pKa = 6.79DD198 pKa = 4.58SNRR201 pKa = 11.84SEE203 pKa = 4.19PSPTRR208 pKa = 11.84PRR210 pKa = 3.53

Molecular weight: 23.85 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1554

105

421

259.0

29.47

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.505 ± 0.821

1.351 ± 0.52

4.826 ± 0.502

4.054 ± 0.397

2.767 ± 0.408

6.435 ± 1.03

3.99 ± 0.583

7.722 ± 1.724

3.99 ± 0.332

8.43 ± 0.471

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.218 ± 0.556

4.762 ± 0.81

5.47 ± 0.375

4.054 ± 0.685

8.559 ± 1.881

8.366 ± 0.956

6.885 ± 0.395

5.856 ± 0.619

1.609 ± 0.789

3.153 ± 0.935
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski