Flavimobilis soli

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Jonesiaceae; Flavimobilis

Average proteome isoelectric point is 6.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2501 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2A9EC68|A0A2A9EC68_9MICO Serine hydroxymethyltransferase OS=Flavimobilis soli OX=442709 GN=glyA PE=3 SV=1
MM1 pKa = 7.17TKK3 pKa = 10.22SRR5 pKa = 11.84LCRR8 pKa = 11.84GVMAGSVLVLLLAGCSDD25 pKa = 4.5DD26 pKa = 5.02PEE28 pKa = 4.61TPAPGTTGASSTTTDD43 pKa = 3.72PAEE46 pKa = 4.54TPQGPALCAEE56 pKa = 4.46EE57 pKa = 4.69TVADD61 pKa = 3.92PASFATAGEE70 pKa = 4.15IVAVQDD76 pKa = 3.91EE77 pKa = 4.39MSEE80 pKa = 4.08AAGTSWRR87 pKa = 11.84RR88 pKa = 11.84YY89 pKa = 8.63VPVTVTNPGTATCRR103 pKa = 11.84VKK105 pKa = 11.13AFVTVEE111 pKa = 4.02GDD113 pKa = 3.01GGAYY117 pKa = 9.61EE118 pKa = 4.81VDD120 pKa = 3.4TADD123 pKa = 3.84VVLEE127 pKa = 4.38PGATANVQLFNLDD140 pKa = 3.66DD141 pKa = 3.82VVEE144 pKa = 4.3FDD146 pKa = 4.4GDD148 pKa = 4.0TEE150 pKa = 4.4GGQPVEE156 pKa = 4.11QLTIAVQEE164 pKa = 4.27VATWPVYY171 pKa = 10.48DD172 pKa = 4.59YY173 pKa = 11.69YY174 pKa = 11.44DD175 pKa = 4.34ADD177 pKa = 3.9VEE179 pKa = 4.67FGAVSGEE186 pKa = 4.16GADD189 pKa = 3.29AVLPVTITKK198 pKa = 10.15KK199 pKa = 10.19AVRR202 pKa = 11.84DD203 pKa = 4.04GVPAPYY209 pKa = 10.82GLTPQDD215 pKa = 3.21DD216 pKa = 4.77VYY218 pKa = 11.15IQGVDD223 pKa = 2.97ASGAVVAHH231 pKa = 6.25FSAWALEE238 pKa = 4.32AIEE241 pKa = 4.47VGEE244 pKa = 4.28TTTYY248 pKa = 10.03EE249 pKa = 3.95IPATIAARR257 pKa = 11.84YY258 pKa = 9.54DD259 pKa = 3.66YY260 pKa = 10.84EE261 pKa = 5.54KK262 pKa = 11.07DD263 pKa = 3.48PEE265 pKa = 4.42FPSYY269 pKa = 11.0AYY271 pKa = 10.02QGLSATEE278 pKa = 4.21DD279 pKa = 3.36VAEE282 pKa = 4.0YY283 pKa = 10.13RR284 pKa = 11.84VVRR287 pKa = 11.84FEE289 pKa = 4.03PAFLEE294 pKa = 4.59DD295 pKa = 3.37

Molecular weight: 31.03 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2A9ED64|A0A2A9ED64_9MICO ThiF family protein OS=Flavimobilis soli OX=442709 GN=ATL41_0930 PE=4 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.42KK7 pKa = 8.47RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.22RR11 pKa = 11.84MAKK14 pKa = 9.41KK15 pKa = 9.87KK16 pKa = 9.7HH17 pKa = 5.84RR18 pKa = 11.84KK19 pKa = 8.56LLRR22 pKa = 11.84KK23 pKa = 7.78TRR25 pKa = 11.84HH26 pKa = 3.65QRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.78KK32 pKa = 9.85

Molecular weight: 4.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2501

0

2501

860565

30

2427

344.1

36.56

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.058 ± 0.08

0.574 ± 0.012

6.311 ± 0.043

5.712 ± 0.048

2.596 ± 0.026

9.012 ± 0.04

1.99 ± 0.023

3.426 ± 0.032

2.076 ± 0.041

9.993 ± 0.061

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.714 ± 0.019

1.68 ± 0.021

5.637 ± 0.04

2.662 ± 0.023

7.491 ± 0.049

5.383 ± 0.036

6.458 ± 0.047

10.055 ± 0.046

1.367 ± 0.019

1.804 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski