Ornithinimicrobium sp. H23M54

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Ornithinimicrobiaceae; Ornithinimicrobium; unclassified Ornithinimicrobium

Average proteome isoelectric point is 5.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3622 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A516GEQ0|A0A516GEQ0_9MICO Glycosyltransferase family 2 protein OS=Ornithinimicrobium sp. H23M54 OX=2594265 GN=FNH13_18165 PE=4 SV=1
MM1 pKa = 7.5AVHH4 pKa = 6.16GHH6 pKa = 5.92RR7 pKa = 11.84ARR9 pKa = 11.84RR10 pKa = 11.84WLAAVAGASLVASGFGLAGASAQPPQPMAEE40 pKa = 3.86VGATDD45 pKa = 4.83KK46 pKa = 10.92IDD48 pKa = 3.8EE49 pKa = 4.35EE50 pKa = 4.67VSAQIEE56 pKa = 4.4EE57 pKa = 4.23KK58 pKa = 10.64GAADD62 pKa = 3.71FWVRR66 pKa = 11.84FDD68 pKa = 4.24GRR70 pKa = 11.84PDD72 pKa = 3.1MSQFSSISDD81 pKa = 3.05WDD83 pKa = 3.51ARR85 pKa = 11.84GQAVYY90 pKa = 10.66DD91 pKa = 4.13ALTEE95 pKa = 4.16SADD98 pKa = 4.32ASQQDD103 pKa = 3.16IRR105 pKa = 11.84EE106 pKa = 4.04QLDD109 pKa = 3.47ADD111 pKa = 3.95GVDD114 pKa = 4.4YY115 pKa = 11.03QAFWATNAIRR125 pKa = 11.84ITSGDD130 pKa = 3.3QSLVSTLAADD140 pKa = 3.62SGVEE144 pKa = 4.32GIYY147 pKa = 8.5PTTTYY152 pKa = 8.86EE153 pKa = 4.0APEE156 pKa = 3.97LVEE159 pKa = 4.92ADD161 pKa = 4.03RR162 pKa = 11.84EE163 pKa = 4.23MSPSAVEE170 pKa = 3.77WGVADD175 pKa = 4.75INADD179 pKa = 4.1DD180 pKa = 3.43VWSTYY185 pKa = 9.22GVHH188 pKa = 6.84GEE190 pKa = 4.35GIVVGSIDD198 pKa = 4.3TGVQWDD204 pKa = 4.19HH205 pKa = 6.93PALVDD210 pKa = 4.72AYY212 pKa = 10.43RR213 pKa = 11.84GNNGDD218 pKa = 3.42GTFTHH223 pKa = 7.61DD224 pKa = 3.92YY225 pKa = 9.95NWYY228 pKa = 9.31DD229 pKa = 3.43AAGTSPEE236 pKa = 4.22VPADD240 pKa = 3.81GNGHH244 pKa = 4.99GTHH247 pKa = 5.45VTGTMVGDD255 pKa = 4.21DD256 pKa = 3.53GGEE259 pKa = 4.11NQVGVAPGATWISANGCCPSDD280 pKa = 3.48QALIDD285 pKa = 3.6SGQWMLAPTKK295 pKa = 10.68LDD297 pKa = 3.24GTSPDD302 pKa = 3.36TTKK305 pKa = 10.66RR306 pKa = 11.84PHH308 pKa = 7.13IINNSWGTTLPSNDD322 pKa = 3.57PFMEE326 pKa = 4.26DD327 pKa = 4.99VIEE330 pKa = 4.34AWDD333 pKa = 3.46AAGIFSMWANGNSGPACNTSGAPGSRR359 pKa = 11.84IITYY363 pKa = 10.34SVGNYY368 pKa = 9.23NSSHH372 pKa = 6.8AISNTSGKK380 pKa = 10.58GAGQDD385 pKa = 4.11GEE387 pKa = 4.4IKK389 pKa = 10.53PNIAAPGSAIRR400 pKa = 11.84SSVPGNGYY408 pKa = 10.96ANYY411 pKa = 9.79SGTSMASPHH420 pKa = 6.29AAGAVALLWSAAPSLVGDD438 pKa = 3.92IEE440 pKa = 4.42GTRR443 pKa = 11.84ALLDD447 pKa = 3.21GTAIDD452 pKa = 4.75TEE454 pKa = 4.17NLTCGGTADD463 pKa = 4.16DD464 pKa = 4.36NNVFGEE470 pKa = 4.34GRR472 pKa = 11.84LDD474 pKa = 3.45ALALIEE480 pKa = 4.46AAPTGDD486 pKa = 3.27TGEE489 pKa = 4.41LNGTVTDD496 pKa = 4.63ADD498 pKa = 3.7TGDD501 pKa = 4.69AISGANVVIVGEE513 pKa = 4.25AEE515 pKa = 3.98RR516 pKa = 11.84TTVTDD521 pKa = 3.55AEE523 pKa = 4.59GTYY526 pKa = 10.85SSLLVAGDD534 pKa = 3.63YY535 pKa = 11.21DD536 pKa = 3.97VTVSKK541 pKa = 10.55FGYY544 pKa = 8.34GTEE547 pKa = 4.39TEE549 pKa = 4.68SVTVPAGGTATLDD562 pKa = 3.49FDD564 pKa = 5.97LEE566 pKa = 4.42AQEE569 pKa = 4.35STAVSGVVTDD579 pKa = 4.68GSGHH583 pKa = 6.18GWPVYY588 pKa = 10.87AKK590 pKa = 10.6VSVQGTDD597 pKa = 2.5VSTYY601 pKa = 9.08TDD603 pKa = 3.97PATGEE608 pKa = 4.08YY609 pKa = 10.02TLALPIGADD618 pKa = 3.27YY619 pKa = 10.12TLEE622 pKa = 4.26VEE624 pKa = 4.34AQYY627 pKa = 10.76PGYY630 pKa = 8.62EE631 pKa = 4.01TATVVVSPQGAPLTGSRR648 pKa = 11.84EE649 pKa = 3.98SAKK652 pKa = 10.18RR653 pKa = 11.84VPQVVQDD660 pKa = 3.34IQVIVDD666 pKa = 3.88ADD668 pKa = 3.77SCVAPGYY675 pKa = 9.31AHH677 pKa = 6.71SSEE680 pKa = 4.22GVVEE684 pKa = 4.59SFDD687 pKa = 3.55GTEE690 pKa = 4.14TPEE693 pKa = 3.86GWTVTDD699 pKa = 4.28DD700 pKa = 3.71AGTGQVWLFDD710 pKa = 4.11DD711 pKa = 3.7SRR713 pKa = 11.84NRR715 pKa = 11.84GNLTGGEE722 pKa = 3.84GGYY725 pKa = 10.83AIVDD729 pKa = 3.5SDD731 pKa = 4.02NYY733 pKa = 11.11GSGGVQDD740 pKa = 4.2TSLVTPVVDD749 pKa = 4.15MSALAEE755 pKa = 3.83PVIGFKK761 pKa = 10.26HH762 pKa = 6.99DD763 pKa = 3.55YY764 pKa = 10.4NAFLGTGEE772 pKa = 4.16SGEE775 pKa = 4.15VDD777 pKa = 3.41VSIDD781 pKa = 4.25GGEE784 pKa = 3.99TWEE787 pKa = 4.23TLATYY792 pKa = 7.64TTDD795 pKa = 2.88SRR797 pKa = 11.84GEE799 pKa = 4.14VVLPMPTAAGEE810 pKa = 4.02SDD812 pKa = 3.75VQVRR816 pKa = 11.84FHH818 pKa = 6.96YY819 pKa = 10.24SASWDD824 pKa = 3.59YY825 pKa = 8.9WWQVDD830 pKa = 4.49DD831 pKa = 4.34VFVGNRR837 pKa = 11.84TCEE840 pKa = 3.63PSIAGGYY847 pKa = 8.72VVGTVASAEE856 pKa = 4.16TGEE859 pKa = 4.68GIVGASVTSVEE870 pKa = 4.34APEE873 pKa = 4.42EE874 pKa = 4.22SATTVATPDD883 pKa = 5.03DD884 pKa = 4.37EE885 pKa = 5.26NLDD888 pKa = 4.13DD889 pKa = 4.03GFYY892 pKa = 10.19WIFSTLTGAHH902 pKa = 6.65DD903 pKa = 4.5FEE905 pKa = 4.74ATARR909 pKa = 11.84GYY911 pKa = 11.12EE912 pKa = 4.27SVTQSVDD919 pKa = 3.21VAEE922 pKa = 5.14DD923 pKa = 3.55DD924 pKa = 4.09AVRR927 pKa = 11.84ADD929 pKa = 3.6FTLGSGLVDD938 pKa = 3.49VSPDD942 pKa = 3.43SITTYY947 pKa = 10.5VQLGDD952 pKa = 3.86SVTDD956 pKa = 3.78KK957 pKa = 10.76LTISNTGTGAAEE969 pKa = 4.08VTLSEE974 pKa = 4.23LAGDD978 pKa = 4.11FEE980 pKa = 4.9ILRR983 pKa = 11.84ADD985 pKa = 3.57GTKK988 pKa = 10.48EE989 pKa = 4.28LMSEE993 pKa = 3.81MHH995 pKa = 5.86KK996 pKa = 9.77TEE998 pKa = 4.23GAPLQEE1004 pKa = 4.53IEE1006 pKa = 4.83AEE1008 pKa = 4.3VSFAQHH1014 pKa = 6.31ASGLAAQAEE1023 pKa = 4.29PAARR1027 pKa = 11.84GVAEE1031 pKa = 4.94APWTDD1036 pKa = 3.65LPQLGSVNMDD1046 pKa = 2.61GRR1048 pKa = 11.84AVNLDD1053 pKa = 3.49GTWYY1057 pKa = 10.68LITGGSGSASYY1068 pKa = 11.59ADD1070 pKa = 3.68VLRR1073 pKa = 11.84YY1074 pKa = 9.63DD1075 pKa = 4.34AEE1077 pKa = 4.45DD1078 pKa = 3.7MSWTAVAPLPSARR1091 pKa = 11.84NAVTAGVVNGQIVVSGGWVAAGTTAEE1117 pKa = 4.15TFVYY1121 pKa = 10.68DD1122 pKa = 4.43EE1123 pKa = 5.42GADD1126 pKa = 3.32SWTAVADD1133 pKa = 3.72NPVAVSAAGQAVADD1147 pKa = 4.15GKK1149 pKa = 10.74LYY1151 pKa = 11.03SVGGCSSADD1160 pKa = 3.53CTPMSNAVTAYY1171 pKa = 10.61DD1172 pKa = 4.24PGTDD1176 pKa = 3.05TWEE1179 pKa = 4.04TLANYY1184 pKa = 7.54PAPVAFASCGGINGEE1199 pKa = 4.61VYY1201 pKa = 9.44CTGGNGGAAGTAASYY1216 pKa = 11.22VYY1218 pKa = 10.53TPDD1221 pKa = 3.21TDD1223 pKa = 3.04TWTAIADD1230 pKa = 3.79APIDD1234 pKa = 3.62TWASQYY1240 pKa = 11.21AAANGMLIVNGGVQGGTITNATFAYY1265 pKa = 10.29DD1266 pKa = 3.62PSTDD1270 pKa = 3.12EE1271 pKa = 5.12WVDD1274 pKa = 3.84LPNSNTAVYY1283 pKa = 9.86RR1284 pKa = 11.84GAAACGFGKK1293 pKa = 10.67FGGSSGNFNATANTEE1308 pKa = 4.12YY1309 pKa = 11.08LPGFDD1314 pKa = 4.45DD1315 pKa = 5.08CGAAGADD1322 pKa = 3.99VEE1324 pKa = 4.49WLSLSATEE1332 pKa = 4.03LTIPAGEE1339 pKa = 4.38SVTVDD1344 pKa = 2.97VTTDD1348 pKa = 3.22GNVAQPGVYY1357 pKa = 8.65TAGIKK1362 pKa = 10.33VSANTPQSFDD1372 pKa = 4.45PIPVTMHH1379 pKa = 5.99VSPPRR1384 pKa = 11.84PWGKK1388 pKa = 10.83LMGNVSGVDD1397 pKa = 3.78CDD1399 pKa = 3.94TVTAPIAGATVDD1411 pKa = 3.43ITPTRR1416 pKa = 11.84TDD1418 pKa = 2.8HH1419 pKa = 6.63PGWVLSTDD1427 pKa = 3.23ADD1429 pKa = 3.3GDD1431 pKa = 3.93YY1432 pKa = 10.28ATWVNTQHH1440 pKa = 5.9TRR1442 pKa = 11.84PGGVQIIAAKK1452 pKa = 10.48DD1453 pKa = 3.2GWRR1456 pKa = 11.84PKK1458 pKa = 10.6AATADD1463 pKa = 3.79PARR1466 pKa = 11.84GVVRR1470 pKa = 11.84TVNFTLAKK1478 pKa = 9.76IGCC1481 pKa = 4.1

Molecular weight: 152.72 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A516G6M8|A0A516G6M8_9MICO Formyltetrahydrofolate deformylase OS=Ornithinimicrobium sp. H23M54 OX=2594265 GN=purU PE=3 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.0RR4 pKa = 11.84TFQPNNRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84SRR15 pKa = 11.84VHH17 pKa = 6.33GFRR20 pKa = 11.84LRR22 pKa = 11.84MRR24 pKa = 11.84TRR26 pKa = 11.84AGRR29 pKa = 11.84SILASRR35 pKa = 11.84RR36 pKa = 11.84AKK38 pKa = 10.66GRR40 pKa = 11.84TKK42 pKa = 10.86LSAA45 pKa = 3.61

Molecular weight: 5.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3622

0

3622

1205281

32

3158

332.8

35.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.637 ± 0.048

0.667 ± 0.011

6.3 ± 0.039

6.06 ± 0.038

2.653 ± 0.024

9.27 ± 0.039

2.299 ± 0.021

3.707 ± 0.031

1.662 ± 0.026

10.395 ± 0.052

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.887 ± 0.018

1.741 ± 0.021

5.744 ± 0.031

3.3 ± 0.019

7.277 ± 0.049

5.458 ± 0.033

6.414 ± 0.038

9.06 ± 0.036

1.589 ± 0.015

1.88 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski