Sutterella wadsworthensis HGA0223

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; Sutterella wadsworthensis

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2393 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|S3BG13|S3BG13_9BURK ABC transporter domain-containing protein OS=Sutterella wadsworthensis HGA0223 OX=1203554 GN=HMPREF1476_01080 PE=4 SV=1
MM1 pKa = 8.25SEE3 pKa = 4.22EE4 pKa = 4.05DD5 pKa = 2.85TGAPHH10 pKa = 7.08FATGAEE16 pKa = 4.28VEE18 pKa = 4.28ALLDD22 pKa = 3.27KK23 pKa = 10.67YY24 pKa = 11.44ARR26 pKa = 11.84DD27 pKa = 3.21RR28 pKa = 11.84VGAHH32 pKa = 5.57TRR34 pKa = 11.84MQCKK38 pKa = 9.36VCWYY42 pKa = 10.11VYY44 pKa = 10.76NPDD47 pKa = 3.52EE48 pKa = 4.72GCPEE52 pKa = 3.92EE53 pKa = 6.58AIDD56 pKa = 4.83PGTPFLDD63 pKa = 4.0LPDD66 pKa = 5.6DD67 pKa = 4.88FVCPDD72 pKa = 3.64CGHH75 pKa = 7.47PKK77 pKa = 9.17TAFLPLDD84 pKa = 4.82DD85 pKa = 5.39DD86 pKa = 5.1QIDD89 pKa = 3.82PSDD92 pKa = 3.93PSGPAQGWSDD102 pKa = 3.21RR103 pKa = 11.84WEE105 pKa = 4.19HH106 pKa = 5.67GG107 pKa = 3.28

Molecular weight: 11.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|S3BEN8|S3BEN8_9BURK Translation initiation factor IF-1 OS=Sutterella wadsworthensis HGA0223 OX=1203554 GN=infA PE=3 SV=1
MM1 pKa = 7.15VRR3 pKa = 11.84TEE5 pKa = 3.8ALKK8 pKa = 10.72YY9 pKa = 9.93IQLLHH14 pKa = 6.11EE15 pKa = 4.93RR16 pKa = 11.84GEE18 pKa = 4.46GSLKK22 pKa = 9.67ISKK25 pKa = 10.37RR26 pKa = 11.84LGLSRR31 pKa = 11.84NTVRR35 pKa = 11.84KK36 pKa = 9.61YY37 pKa = 10.66LALLDD42 pKa = 3.93SGQPIVLRR50 pKa = 11.84VQRR53 pKa = 11.84ARR55 pKa = 11.84ALDD58 pKa = 4.01PYY60 pKa = 10.87EE61 pKa = 4.16EE62 pKa = 4.34VIKK65 pKa = 10.77RR66 pKa = 11.84LFVDD70 pKa = 4.9CRR72 pKa = 11.84GHH74 pKa = 6.67CPNLQRR80 pKa = 11.84RR81 pKa = 11.84LKK83 pKa = 9.07EE84 pKa = 3.87QLGLAVQLRR93 pKa = 11.84TLQKK97 pKa = 10.39FCQPWRR103 pKa = 11.84KK104 pKa = 7.31TVLTPQEE111 pKa = 3.62RR112 pKa = 11.84VVRR115 pKa = 11.84YY116 pKa = 8.05EE117 pKa = 3.65VNLPDD122 pKa = 3.5RR123 pKa = 4.76

Molecular weight: 14.48 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2393

0

2393

840102

21

2064

351.1

38.33

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.704 ± 0.066

1.177 ± 0.019

5.231 ± 0.036

6.106 ± 0.046

4.075 ± 0.03

7.771 ± 0.049

1.852 ± 0.022

5.331 ± 0.036

4.581 ± 0.043

10.051 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.539 ± 0.026

3.084 ± 0.033

4.755 ± 0.036

3.155 ± 0.028

6.117 ± 0.049

5.984 ± 0.04

5.496 ± 0.049

7.25 ± 0.039

1.341 ± 0.021

2.401 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski