Vernonia yellow vein Fujian betasatellite

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite

Average proteome isoelectric point is 6.3

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G1C5E5|G1C5E5_9VIRU C1 protein OS=Vernonia yellow vein Fujian betasatellite OX=2050589 PE=4 SV=1
MM1 pKa = 7.24NNKK4 pKa = 9.62SSNHH8 pKa = 5.14QSKK11 pKa = 10.59QMTITHH17 pKa = 5.89TTNKK21 pKa = 9.78GIRR24 pKa = 11.84FVFSLQKK31 pKa = 10.1KK32 pKa = 7.82QEE34 pKa = 4.13HH35 pKa = 6.17FLVTVKK41 pKa = 10.66VINTSSPVLSKK52 pKa = 9.25HH53 pKa = 5.28TYY55 pKa = 9.0KK56 pKa = 10.15IRR58 pKa = 11.84YY59 pKa = 8.07DD60 pKa = 3.96YY61 pKa = 10.88QWNAVPFDD69 pKa = 4.22FNGLEE74 pKa = 3.91TSMKK78 pKa = 9.07NTIEE82 pKa = 4.05VLYY85 pKa = 10.54HH86 pKa = 6.57DD87 pKa = 4.91SSYY90 pKa = 11.82NDD92 pKa = 3.25FKK94 pKa = 11.19EE95 pKa = 4.06EE96 pKa = 3.87NMIDD100 pKa = 3.99AIDD103 pKa = 4.03TIMFDD108 pKa = 3.39TNMILGVEE116 pKa = 4.36IIEE119 pKa = 4.25PHH121 pKa = 5.66TCTTSRR127 pKa = 11.84III129 pKa = 4.3

Molecular weight: 15.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G1C5E5|G1C5E5_9VIRU C1 protein OS=Vernonia yellow vein Fujian betasatellite OX=2050589 PE=4 SV=1
MM1 pKa = 7.24NNKK4 pKa = 9.62SSNHH8 pKa = 5.14QSKK11 pKa = 10.59QMTITHH17 pKa = 5.89TTNKK21 pKa = 9.78GIRR24 pKa = 11.84FVFSLQKK31 pKa = 10.1KK32 pKa = 7.82QEE34 pKa = 4.13HH35 pKa = 6.17FLVTVKK41 pKa = 10.66VINTSSPVLSKK52 pKa = 9.25HH53 pKa = 5.28TYY55 pKa = 9.0KK56 pKa = 10.15IRR58 pKa = 11.84YY59 pKa = 8.07DD60 pKa = 3.96YY61 pKa = 10.88QWNAVPFDD69 pKa = 4.22FNGLEE74 pKa = 3.91TSMKK78 pKa = 9.07NTIEE82 pKa = 4.05VLYY85 pKa = 10.54HH86 pKa = 6.57DD87 pKa = 4.91SSYY90 pKa = 11.82NDD92 pKa = 3.25FKK94 pKa = 11.19EE95 pKa = 4.06EE96 pKa = 3.87NMIDD100 pKa = 3.99AIDD103 pKa = 4.03TIMFDD108 pKa = 3.39TNMILGVEE116 pKa = 4.36IIEE119 pKa = 4.25PHH121 pKa = 5.66TCTTSRR127 pKa = 11.84III129 pKa = 4.3

Molecular weight: 15.04 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

129

129

129

129.0

15.04

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

1.55 ± 0.0

0.775 ± 0.0

5.426 ± 0.0

5.426 ± 0.0

5.426 ± 0.0

2.326 ± 0.0

4.651 ± 0.0

10.078 ± 0.0

7.752 ± 0.0

4.651 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

4.651 ± 0.0

8.527 ± 0.0

2.326 ± 0.0

3.876 ± 0.0

2.326 ± 0.0

8.527 ± 0.0

10.853 ± 0.0

6.202 ± 0.0

0.775 ± 0.0

3.876 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski