Olive latent virus 2 (isolate Italy) (OLV-2)

Taxonomy: Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Bromoviridae; Oleavirus; Olive latent virus 2

Average proteome isoelectric point is 7.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q83945|Q83945_OLV2I Uncharacterized protein orf1 OS=Olive latent virus 2 (isolate Italy) OX=650489 GN=orf1 PE=4 SV=1
MM1 pKa = 7.61AGVLYY6 pKa = 10.65DD7 pKa = 3.77EE8 pKa = 5.59EE9 pKa = 4.8YY10 pKa = 11.18VPQEE14 pKa = 4.01PDD16 pKa = 3.27YY17 pKa = 11.09LYY19 pKa = 10.92CPYY22 pKa = 9.92EE23 pKa = 4.12WEE25 pKa = 5.04GEE27 pKa = 4.17DD28 pKa = 4.85PTQCDD33 pKa = 3.34ANVPSVSYY41 pKa = 10.55LVEE44 pKa = 3.97AVKK47 pKa = 10.74KK48 pKa = 10.71SFTEE52 pKa = 4.54GNHH55 pKa = 6.77DD56 pKa = 3.69MLISCEE62 pKa = 4.23SYY64 pKa = 10.44HH65 pKa = 7.13AEE67 pKa = 4.16CCEE70 pKa = 3.92GPLMNKK76 pKa = 9.87GLTLSTYY83 pKa = 9.81FMSYY87 pKa = 10.38PGISLPAFGGGVIHH101 pKa = 5.6VTSARR106 pKa = 11.84VCMQAFYY113 pKa = 11.03AVTPGRR119 pKa = 11.84CSCSCGTQFIYY130 pKa = 10.22RR131 pKa = 11.84AKK133 pKa = 10.47GGTGLTFDD141 pKa = 3.98ATNTISSAFKK151 pKa = 10.99FEE153 pKa = 4.47DD154 pKa = 4.42GKK156 pKa = 11.28VKK158 pKa = 10.15WLTEE162 pKa = 4.02DD163 pKa = 3.92LGLALLAGCFLKK175 pKa = 10.77YY176 pKa = 10.77VPIPHH181 pKa = 6.94EE182 pKa = 3.88IEE184 pKa = 3.62IKK186 pKa = 10.1IEE188 pKa = 4.08RR189 pKa = 11.84KK190 pKa = 9.67VEE192 pKa = 3.85PVSALDD198 pKa = 3.39FWEE201 pKa = 4.52PEE203 pKa = 3.91GLISDD208 pKa = 3.61VHH210 pKa = 5.88FVHH213 pKa = 6.32PQEE216 pKa = 4.4RR217 pKa = 11.84ALAPEE222 pKa = 4.29PPMDD226 pKa = 3.53VEE228 pKa = 4.35MVRR231 pKa = 11.84LVRR234 pKa = 11.84TEE236 pKa = 3.9LFEE239 pKa = 4.57HH240 pKa = 6.78FNPTLLLNARR250 pKa = 11.84SDD252 pKa = 3.8FSGEE256 pKa = 3.8KK257 pKa = 10.06LKK259 pKa = 10.86EE260 pKa = 4.02VEE262 pKa = 4.13LPRR265 pKa = 11.84AQSEE269 pKa = 4.23PLVPRR274 pKa = 11.84VCLPRR279 pKa = 11.84GDD281 pKa = 4.97DD282 pKa = 3.52ALIDD286 pKa = 3.36QFFIDD291 pKa = 4.5KK292 pKa = 10.79APEE295 pKa = 3.95HH296 pKa = 6.53FNRR299 pKa = 11.84EE300 pKa = 3.88PATDD304 pKa = 3.27QWQVEE309 pKa = 4.42SDD311 pKa = 3.91DD312 pKa = 3.86FTVDD316 pKa = 3.78FPTQVRR322 pKa = 11.84LRR324 pKa = 11.84EE325 pKa = 3.85RR326 pKa = 11.84DD327 pKa = 3.42EE328 pKa = 4.03DD329 pKa = 3.55WFRR332 pKa = 11.84RR333 pKa = 11.84KK334 pKa = 9.55PDD336 pKa = 3.57FAVSSIRR343 pKa = 11.84TGLEE347 pKa = 3.46MPRR350 pKa = 11.84IATKK354 pKa = 10.78KK355 pKa = 8.46EE356 pKa = 3.36MLMAFSKK363 pKa = 10.83RR364 pKa = 11.84NVGAPQMVEE373 pKa = 4.18VPQEE377 pKa = 3.68IHH379 pKa = 6.05VKK381 pKa = 10.19RR382 pKa = 11.84LADD385 pKa = 3.5RR386 pKa = 11.84FFRR389 pKa = 11.84TFLKK393 pKa = 10.69EE394 pKa = 4.07GGWDD398 pKa = 3.57KK399 pKa = 11.8GDD401 pKa = 3.03GHH403 pKa = 6.72YY404 pKa = 10.32WDD406 pKa = 5.82DD407 pKa = 3.55FFHH410 pKa = 6.95RR411 pKa = 11.84KK412 pKa = 7.49GRR414 pKa = 11.84KK415 pKa = 8.71VFSLEE420 pKa = 3.58NCYY423 pKa = 10.9DD424 pKa = 4.15DD425 pKa = 5.14PLSSYY430 pKa = 11.43LVMLKK435 pKa = 10.42SAGKK439 pKa = 10.22FSLDD443 pKa = 2.97LNFPVRR449 pKa = 11.84SVPQTITYY457 pKa = 8.75HH458 pKa = 5.57EE459 pKa = 4.19KK460 pKa = 9.41WVTEE464 pKa = 4.02VFSPMFLQVMARR476 pKa = 11.84FFSRR480 pKa = 11.84LQDD483 pKa = 3.43WVVVPAGPMADD494 pKa = 4.91FSRR497 pKa = 11.84VWPSFEE503 pKa = 4.27GKK505 pKa = 10.17CLTEE509 pKa = 4.77IDD511 pKa = 3.93LSKK514 pKa = 10.64FDD516 pKa = 3.92KK517 pKa = 11.2SQGKK521 pKa = 8.89LLHH524 pKa = 6.67DD525 pKa = 3.74VQRR528 pKa = 11.84EE529 pKa = 3.63IFLRR533 pKa = 11.84LGFPPIWCDD542 pKa = 2.18WWFKK546 pKa = 9.99FHH548 pKa = 7.01EE549 pKa = 4.35SSYY552 pKa = 11.54LNDD555 pKa = 3.73KK556 pKa = 10.64NLGIAFSVDD565 pKa = 3.14YY566 pKa = 10.6QRR568 pKa = 11.84RR569 pKa = 11.84TGNTATYY576 pKa = 9.93FGNTLVTMIMMAEE589 pKa = 4.2VYY591 pKa = 10.08EE592 pKa = 4.4LDD594 pKa = 3.64SLPFCGLFSGDD605 pKa = 4.24DD606 pKa = 3.63NLIVTDD612 pKa = 4.35RR613 pKa = 11.84PLEE616 pKa = 4.15GRR618 pKa = 11.84VSLFPNMFNMEE629 pKa = 4.64AKK631 pKa = 10.31VMRR634 pKa = 11.84PGQNYY639 pKa = 7.12MCSKK643 pKa = 10.01YY644 pKa = 10.74LCTVDD649 pKa = 4.98GRR651 pKa = 11.84VTPVPDD657 pKa = 3.86PFKK660 pKa = 10.82LLKK663 pKa = 10.22KK664 pKa = 10.48AGASCPLEE672 pKa = 4.36HH673 pKa = 7.35LDD675 pKa = 5.16DD676 pKa = 4.88FYY678 pKa = 11.78EE679 pKa = 4.66SFLDD683 pKa = 3.54YY684 pKa = 10.71TKK686 pKa = 11.2YY687 pKa = 10.53LVRR690 pKa = 11.84DD691 pKa = 3.78EE692 pKa = 4.33VRR694 pKa = 11.84TLIPRR699 pKa = 11.84LMAHH703 pKa = 7.71RR704 pKa = 11.84YY705 pKa = 6.78QVSMDD710 pKa = 3.62EE711 pKa = 4.65AGVALDD717 pKa = 5.63QIMSWRR723 pKa = 11.84KK724 pKa = 9.8SKK726 pKa = 8.67TQFFKK731 pKa = 10.63HH732 pKa = 4.67FQYY735 pKa = 10.72RR736 pKa = 11.84KK737 pKa = 8.84PIKK740 pKa = 10.32DD741 pKa = 3.13SLEE744 pKa = 3.96AVKK747 pKa = 10.75SDD749 pKa = 3.4FLSAFGKK756 pKa = 9.59VDD758 pKa = 3.09DD759 pKa = 5.69RR760 pKa = 11.84IRR762 pKa = 11.84VWRR765 pKa = 11.84GRR767 pKa = 11.84RR768 pKa = 11.84TNHH771 pKa = 6.02KK772 pKa = 10.54KK773 pKa = 10.23EE774 pKa = 3.63VDD776 pKa = 3.42ALKK779 pKa = 10.94VPLVSFRR786 pKa = 11.84EE787 pKa = 4.17

Molecular weight: 90.69 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q83946|Q83946_OLV2I Capsid protein OS=Olive latent virus 2 (isolate Italy) OX=650489 GN=orf2 PE=4 SV=1
MM1 pKa = 7.57SSGDD5 pKa = 3.45EE6 pKa = 4.17TVPKK10 pKa = 10.38LKK12 pKa = 10.17QSKK15 pKa = 10.26LSLDD19 pKa = 3.17RR20 pKa = 11.84HH21 pKa = 5.45KK22 pKa = 11.16ASWSYY27 pKa = 10.74SVPWQRR33 pKa = 11.84GRR35 pKa = 11.84RR36 pKa = 11.84FRR38 pKa = 11.84VQTSHH43 pKa = 6.9VGAEE47 pKa = 4.04SQYY50 pKa = 9.33PLLVATSSLLLSGAA64 pKa = 3.95

Molecular weight: 7.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2453

64

908

408.8

46.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.194 ± 1.143

1.508 ± 0.598

5.503 ± 0.787

6.319 ± 0.622

5.544 ± 0.713

6.36 ± 1.016

2.731 ± 0.281

3.384 ± 0.319

5.3 ± 1.477

8.806 ± 0.535

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.609 ± 0.436

2.65 ± 0.183

5.096 ± 0.64

3.506 ± 0.378

6.767 ± 0.975

8.194 ± 1.102

4.77 ± 0.282

7.949 ± 0.876

1.631 ± 0.315

3.18 ± 0.376
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski