Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) (Vibrio succinogenes)
Taxonomy: cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Wolinella; Wolinella succinogenes
Average proteome isoelectric point is 6.46
Get precalculated fractions of proteins
Virtual 2D-PAGE plot for 2028 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|Q7MQZ0|Q7MQZ0_WOLSU Uncharacterized protein OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) OX=273121 GN=WS1887 PE=4 SV=1
MM1 pKa = 8.05SLMITEE7 pKa = 4.24EE8 pKa = 4.63CIACDD13 pKa = 3.6ACRR16 pKa = 11.84EE17 pKa = 4.11EE18 pKa = 5.06CPNEE22 pKa = 4.57AIDD25 pKa = 4.79EE26 pKa = 4.46GDD28 pKa = 3.67PTYY31 pKa = 10.55MIDD34 pKa = 3.57PDD36 pKa = 3.73RR37 pKa = 11.84CTEE40 pKa = 3.94CVGYY44 pKa = 10.39YY45 pKa = 10.14DD46 pKa = 4.76EE47 pKa = 5.24PSCVGACPVDD57 pKa = 5.22AIIPDD62 pKa = 4.07PDD64 pKa = 3.39NVEE67 pKa = 4.2SVEE70 pKa = 3.9EE71 pKa = 3.85LKK73 pKa = 11.31YY74 pKa = 10.84KK75 pKa = 10.69FEE77 pKa = 3.99QLQNEE82 pKa = 4.54EE83 pKa = 4.12
MM1 pKa = 8.05SLMITEE7 pKa = 4.24EE8 pKa = 4.63CIACDD13 pKa = 3.6ACRR16 pKa = 11.84EE17 pKa = 4.11EE18 pKa = 5.06CPNEE22 pKa = 4.57AIDD25 pKa = 4.79EE26 pKa = 4.46GDD28 pKa = 3.67PTYY31 pKa = 10.55MIDD34 pKa = 3.57PDD36 pKa = 3.73RR37 pKa = 11.84CTEE40 pKa = 3.94CVGYY44 pKa = 10.39YY45 pKa = 10.14DD46 pKa = 4.76EE47 pKa = 5.24PSCVGACPVDD57 pKa = 5.22AIIPDD62 pKa = 4.07PDD64 pKa = 3.39NVEE67 pKa = 4.2SVEE70 pKa = 3.9EE71 pKa = 3.85LKK73 pKa = 11.31YY74 pKa = 10.84KK75 pKa = 10.69FEE77 pKa = 3.99QLQNEE82 pKa = 4.54EE83 pKa = 4.12
Molecular weight: 9.33 kDa
Isoelectric point according different methods:
Protein with the highest isoelectric point:
>tr|Q7MA09|Q7MA09_WOLSU PUTATIVE TYPE II PROTEIN SECRETION E OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) OX=273121 GN=WS0543 PE=3 SV=1
MM1 pKa = 7.81RR2 pKa = 11.84NRR4 pKa = 11.84YY5 pKa = 8.98IEE7 pKa = 4.4SFEE10 pKa = 4.03KK11 pKa = 10.92AQIADD16 pKa = 3.53KK17 pKa = 10.91NIPQFKK23 pKa = 10.64AGDD26 pKa = 3.75TLRR29 pKa = 11.84VGVKK33 pKa = 9.52IQEE36 pKa = 4.05GDD38 pKa = 3.07KK39 pKa = 10.85TRR41 pKa = 11.84VQNFEE46 pKa = 4.43GICISVRR53 pKa = 11.84GTGTGKK59 pKa = 8.35TFTIRR64 pKa = 11.84KK65 pKa = 7.8MGANNVGVEE74 pKa = 4.52RR75 pKa = 11.84IFPLYY80 pKa = 10.33SDD82 pKa = 3.77SLEE85 pKa = 4.28SVTLLRR91 pKa = 11.84VGRR94 pKa = 11.84VRR96 pKa = 11.84RR97 pKa = 11.84AKK99 pKa = 10.34LYY101 pKa = 9.03YY102 pKa = 10.49LRR104 pKa = 11.84DD105 pKa = 3.64RR106 pKa = 11.84SGKK109 pKa = 7.29SARR112 pKa = 11.84IKK114 pKa = 9.98EE115 pKa = 4.03LRR117 pKa = 11.84KK118 pKa = 10.02
MM1 pKa = 7.81RR2 pKa = 11.84NRR4 pKa = 11.84YY5 pKa = 8.98IEE7 pKa = 4.4SFEE10 pKa = 4.03KK11 pKa = 10.92AQIADD16 pKa = 3.53KK17 pKa = 10.91NIPQFKK23 pKa = 10.64AGDD26 pKa = 3.75TLRR29 pKa = 11.84VGVKK33 pKa = 9.52IQEE36 pKa = 4.05GDD38 pKa = 3.07KK39 pKa = 10.85TRR41 pKa = 11.84VQNFEE46 pKa = 4.43GICISVRR53 pKa = 11.84GTGTGKK59 pKa = 8.35TFTIRR64 pKa = 11.84KK65 pKa = 7.8MGANNVGVEE74 pKa = 4.52RR75 pKa = 11.84IFPLYY80 pKa = 10.33SDD82 pKa = 3.77SLEE85 pKa = 4.28SVTLLRR91 pKa = 11.84VGRR94 pKa = 11.84VRR96 pKa = 11.84RR97 pKa = 11.84AKK99 pKa = 10.34LYY101 pKa = 9.03YY102 pKa = 10.49LRR104 pKa = 11.84DD105 pKa = 3.64RR106 pKa = 11.84SGKK109 pKa = 7.29SARR112 pKa = 11.84IKK114 pKa = 9.98EE115 pKa = 4.03LRR117 pKa = 11.84KK118 pKa = 10.02
Molecular weight: 13.47 kDa
Isoelectric point according different methods:
Peptides (in silico digests for buttom-up proteomics)
Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.| Try ESI |
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| ChTry ESI |
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| ArgC ESI |
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| LysN ESI |
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| TryLysC ESI |
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| Try MALDI |
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| ChTry MALDI |
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| ArgC MALDI |
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| LysN MALDI |
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| TryLysC MALDI |
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| Try LTQ |
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| ChTry LTQ |
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| ArgC LTQ |
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| LysN LTQ |
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| TryLysC LTQ |
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| Try MSlow |
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| ChTry MSlow |
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| ArgC MSlow |
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| LysN MSlow |
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| TryLysC MSlow |
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| Try MShigh |
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| ChTry MShigh |
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| ArgC MShigh |
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| LysN MShigh |
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| TryLysC MShigh |
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General Statistics
Number of major isoforms |
Number of additional isoforms |
Number of all proteins |
Number of amino acids |
Min. Seq. Length |
Max. Seq. Length |
Avg. Seq. Length |
Avg. Mol. Weight |
|---|---|---|---|---|---|---|---|
0 |
654246 |
33 |
2883 |
322.6 |
36.16 |
Amino acid frequency
Ala |
Cys |
Asp |
Glu |
Phe |
Gly |
His |
Ile |
Lys |
Leu |
|---|---|---|---|---|---|---|---|---|---|
7.902 ± 0.051 | 0.943 ± 0.023 |
4.334 ± 0.038 | 8.274 ± 0.064 |
4.807 ± 0.041 | 7.111 ± 0.054 |
2.074 ± 0.025 | 7.103 ± 0.044 |
6.736 ± 0.052 | 11.548 ± 0.08 |
Met |
Asn |
Gln |
Pro |
Arg |
Ser |
Thr |
Val |
Trp |
Tyr |
|---|---|---|---|---|---|---|---|---|---|
2.47 ± 0.024 | 3.427 ± 0.039 |
3.734 ± 0.038 | 3.187 ± 0.032 |
5.008 ± 0.042 | 6.944 ± 0.045 |
4.238 ± 0.041 | 5.877 ± 0.046 |
0.977 ± 0.02 | 3.305 ± 0.031 |
Most of the basic statistics you can see at this page can be downloaded from this CSV file
See this proteome in:
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here
| Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 | Contact: Lukasz P. Kozlowski |