Bovine adenovirus B serotype 3 (BAdV-3) (Mastadenovirus bos3)

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; Bovine mastadenovirus B

Average proteome isoelectric point is 7.02

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 28 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q64844|Q64844_ADEB3 E1B 55 kDa protein OS=Bovine adenovirus B serotype 3 OX=10510 GN=E1B PE=3 SV=1
MM1 pKa = 7.74KK2 pKa = 10.71YY3 pKa = 10.36LVLVLNDD10 pKa = 3.04GMSRR14 pKa = 11.84IEE16 pKa = 4.26KK17 pKa = 10.54ALLCSDD23 pKa = 4.1GEE25 pKa = 4.28VDD27 pKa = 4.85LEE29 pKa = 4.28CHH31 pKa = 5.66EE32 pKa = 4.63VLPPSPAPVPASVSPVRR49 pKa = 11.84SPPPLSPVFPPSPPAPLVNPEE70 pKa = 4.23ASSLLQQYY78 pKa = 9.58RR79 pKa = 11.84RR80 pKa = 11.84EE81 pKa = 3.96LLEE84 pKa = 4.36RR85 pKa = 11.84SLLRR89 pKa = 11.84TAEE92 pKa = 4.09GQQRR96 pKa = 11.84AVCPCEE102 pKa = 3.68RR103 pKa = 11.84LPVEE107 pKa = 4.71EE108 pKa = 5.3DD109 pKa = 3.01EE110 pKa = 5.32CLNAVNLLFPDD121 pKa = 3.61PWLNAAEE128 pKa = 4.14NGGDD132 pKa = 3.43IFKK135 pKa = 10.73SPAMSPEE142 pKa = 3.52PWIDD146 pKa = 3.35LSSYY150 pKa = 11.05DD151 pKa = 3.61SDD153 pKa = 4.09VEE155 pKa = 4.25EE156 pKa = 4.49VTSHH160 pKa = 7.13FFLDD164 pKa = 4.22CPEE167 pKa = 4.49DD168 pKa = 3.75PSRR171 pKa = 11.84EE172 pKa = 3.94CSSCGFHH179 pKa = 5.98QAQSGIPGIMCSLCYY194 pKa = 9.77MRR196 pKa = 11.84QTYY199 pKa = 9.1HH200 pKa = 7.14CIYY203 pKa = 10.35SPVSEE208 pKa = 4.51EE209 pKa = 3.93EE210 pKa = 3.93MM211 pKa = 4.33

Molecular weight: 23.32 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|O71100|O71100_ADEB3 PVI OS=Bovine adenovirus B serotype 3 OX=10510 PE=4 SV=1
MM1 pKa = 7.59SPRR4 pKa = 11.84GNLTYY9 pKa = 10.85RR10 pKa = 11.84LRR12 pKa = 11.84IPVALSGRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84RR23 pKa = 11.84RR24 pKa = 11.84TGLRR28 pKa = 11.84GGSAYY33 pKa = 11.06LLGRR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84AGGGRR46 pKa = 11.84LRR48 pKa = 11.84GGFLPLLAPIIAAAIGAIPGIASVAIQAAHH78 pKa = 6.14NKK80 pKa = 9.21

Molecular weight: 8.5 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

24

4

28

10367

69

1023

370.3

41.33

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.228 ± 0.497

1.939 ± 0.424

4.688 ± 0.207

5.46 ± 0.469

4.138 ± 0.331

6.357 ± 0.641

2.45 ± 0.166

3.887 ± 0.244

3.482 ± 0.358

9.916 ± 0.497

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.122 ± 0.23

4.466 ± 0.499

6.945 ± 0.411

4.514 ± 0.23

7.254 ± 0.674

7.263 ± 0.35

5.865 ± 0.35

6.472 ± 0.408

1.254 ± 0.135

3.299 ± 0.362
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski