Miniopterus schreibersii papillomavirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyotaupapillomavirus; Dyotaupapillomavirus 1

Average proteome isoelectric point is 6.74

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|J9R1I3|J9R1I3_9PAPI Major capsid protein L1 OS=Miniopterus schreibersii papillomavirus 1 OX=1195364 GN=L1 PE=3 SV=1
MM1 pKa = 7.71LYY3 pKa = 10.96DD4 pKa = 4.93NIPGYY9 pKa = 6.59TTLDD13 pKa = 3.59FVEE16 pKa = 4.78SVQAAATTNSQGQLVVLSPCSIGASCCCCGYY47 pKa = 10.73VVVLHH52 pKa = 6.6FVATEE57 pKa = 3.74DD58 pKa = 3.61AAIVVDD64 pKa = 4.3NLITTARR71 pKa = 11.84LNLFCTRR78 pKa = 11.84CVADD82 pKa = 4.45LKK84 pKa = 10.45RR85 pKa = 11.84ARR87 pKa = 11.84DD88 pKa = 3.72GRR90 pKa = 11.84QQ91 pKa = 2.65

Molecular weight: 9.76 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|J9QY83|J9QY83_9PAPI Replication protein E1 OS=Miniopterus schreibersii papillomavirus 1 OX=1195364 GN=E1 PE=3 SV=1
MM1 pKa = 7.08NQRR4 pKa = 11.84TDD6 pKa = 3.31PLTARR11 pKa = 11.84LEE13 pKa = 4.37SVQEE17 pKa = 4.17EE18 pKa = 4.11IFEE21 pKa = 5.05LIEE24 pKa = 4.06EE25 pKa = 4.33SSNRR29 pKa = 11.84LEE31 pKa = 3.98DD32 pKa = 3.64QIRR35 pKa = 11.84YY36 pKa = 8.43WEE38 pKa = 4.87LIRR41 pKa = 11.84KK42 pKa = 7.27EE43 pKa = 3.87QALLFLARR51 pKa = 11.84RR52 pKa = 11.84EE53 pKa = 4.02RR54 pKa = 11.84ITRR57 pKa = 11.84IGAEE61 pKa = 4.22VVPPLSVSEE70 pKa = 4.29TRR72 pKa = 11.84AKK74 pKa = 10.35QAIQMSLLLTSLNKK88 pKa = 9.89SHH90 pKa = 6.71YY91 pKa = 10.21KK92 pKa = 9.87NEE94 pKa = 3.83PWTMQEE100 pKa = 3.78TSRR103 pKa = 11.84EE104 pKa = 3.88RR105 pKa = 11.84MLAPPKK111 pKa = 9.72YY112 pKa = 8.11TFKK115 pKa = 11.1KK116 pKa = 9.82AGKK119 pKa = 9.28SVDD122 pKa = 3.46IIFDD126 pKa = 3.88GNIEE130 pKa = 4.04NSVRR134 pKa = 11.84EE135 pKa = 4.24TMWGFIYY142 pKa = 10.89YY143 pKa = 9.65QDD145 pKa = 5.83SDD147 pKa = 5.61DD148 pKa = 4.07EE149 pKa = 4.43WQKK152 pKa = 10.98QPGEE156 pKa = 4.17IDD158 pKa = 3.63DD159 pKa = 3.68QGLFYY164 pKa = 10.56RR165 pKa = 11.84DD166 pKa = 3.2YY167 pKa = 11.27DD168 pKa = 3.68NEE170 pKa = 4.12KK171 pKa = 10.1IYY173 pKa = 11.21YY174 pKa = 9.98VDD176 pKa = 4.28FKK178 pKa = 11.2EE179 pKa = 4.96LAAKK183 pKa = 9.91YY184 pKa = 9.93SKK186 pKa = 10.19EE187 pKa = 3.52GRR189 pKa = 11.84YY190 pKa = 9.41KK191 pKa = 10.97VIVDD195 pKa = 4.07SKK197 pKa = 8.67TVADD201 pKa = 3.88VVVSHH206 pKa = 7.19LDD208 pKa = 3.35NSEE211 pKa = 4.13SPVRR215 pKa = 11.84TKK217 pKa = 10.6AAPAGRR223 pKa = 11.84RR224 pKa = 11.84RR225 pKa = 11.84ISGGRR230 pKa = 11.84RR231 pKa = 11.84RR232 pKa = 11.84PRR234 pKa = 11.84GRR236 pKa = 11.84SSSHH240 pKa = 5.24STPASTSSSSTPTRR254 pKa = 11.84SRR256 pKa = 11.84SRR258 pKa = 11.84PRR260 pKa = 11.84RR261 pKa = 11.84AYY263 pKa = 9.25TGAAPSPRR271 pKa = 11.84EE272 pKa = 3.81VGTQHH277 pKa = 7.19ASVTGPSGSRR287 pKa = 11.84LRR289 pKa = 11.84RR290 pKa = 11.84LLQEE294 pKa = 4.59ARR296 pKa = 11.84DD297 pKa = 3.98PPAVILSGPANTVKK311 pKa = 10.63CLRR314 pKa = 11.84FRR316 pKa = 11.84CRR318 pKa = 11.84HH319 pKa = 5.99RR320 pKa = 11.84YY321 pKa = 9.02NEE323 pKa = 4.03YY324 pKa = 9.98FDD326 pKa = 5.63KK327 pKa = 10.92ISTTWWWTGDD337 pKa = 2.81GRR339 pKa = 11.84TRR341 pKa = 11.84TGDD344 pKa = 2.93ASMLVSFQSEE354 pKa = 4.24SQRR357 pKa = 11.84TSFLNTVPVPSSVTVSAANLFLRR380 pKa = 4.84

Molecular weight: 43.4 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2412

91

669

344.6

38.73

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.965 ± 0.364

1.866 ± 0.711

5.846 ± 0.488

6.551 ± 0.505

4.063 ± 0.315

6.385 ± 0.799

2.612 ± 0.425

4.685 ± 0.331

4.809 ± 0.747

8.831 ± 0.821

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.824 ± 0.232

3.483 ± 0.405

6.302 ± 0.806

4.063 ± 0.24

7.67 ± 1.049

7.09 ± 0.902

6.965 ± 0.491

5.97 ± 0.778

1.119 ± 0.285

2.902 ± 0.448
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski