Cryptosporangium aurantiacum

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Cryptosporangiales; Cryptosporangiaceae; Cryptosporangium

Average proteome isoelectric point is 6.22

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8789 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1M7NP67|A0A1M7NP67_9ACTN Uncharacterized protein OS=Cryptosporangium aurantiacum OX=134849 GN=SAMN05443668_102748 PE=4 SV=1
MM1 pKa = 7.95ADD3 pKa = 5.07FEE5 pKa = 5.3DD6 pKa = 3.88QVDD9 pKa = 3.62WDD11 pKa = 4.91EE12 pKa = 4.06IDD14 pKa = 3.33YY15 pKa = 8.27WTDD18 pKa = 2.71RR19 pKa = 11.84CGACDD24 pKa = 3.74EE25 pKa = 4.69RR26 pKa = 11.84CGGTCEE32 pKa = 5.34DD33 pKa = 4.44YY34 pKa = 11.17PIDD37 pKa = 3.75TTKK40 pKa = 10.74EE41 pKa = 4.09GPRR44 pKa = 3.52

Molecular weight: 5.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1M7RDX3|A0A1M7RDX3_9ACTN VOC domain-containing protein OS=Cryptosporangium aurantiacum OX=134849 GN=SAMN05443668_110200 PE=4 SV=1
MM1 pKa = 8.19DD2 pKa = 5.11IGHH5 pKa = 6.86TPLQCSGQMLGGSNPCKK22 pKa = 10.16APARR26 pKa = 11.84ATVRR30 pKa = 11.84PTVVPVPGRR39 pKa = 11.84TPRR42 pKa = 11.84CPASRR47 pKa = 11.84PRR49 pKa = 11.84SDD51 pKa = 3.38GQSRR55 pKa = 11.84RR56 pKa = 11.84HH57 pKa = 5.54PGPRR61 pKa = 11.84RR62 pKa = 11.84RR63 pKa = 11.84RR64 pKa = 11.84PTVCRR69 pKa = 11.84RR70 pKa = 11.84PSTCSPVPDD79 pKa = 3.88GRR81 pKa = 11.84RR82 pKa = 11.84APPARR87 pKa = 11.84TGSSGSPRR95 pKa = 11.84RR96 pKa = 11.84PRR98 pKa = 11.84CPRR101 pKa = 11.84SRR103 pKa = 11.84ARR105 pKa = 11.84TPRR108 pKa = 11.84PPGRR112 pKa = 11.84RR113 pKa = 11.84RR114 pKa = 11.84RR115 pKa = 11.84ASSRR119 pKa = 11.84RR120 pKa = 11.84CRR122 pKa = 11.84SGRR125 pKa = 11.84GPTAPSRR132 pKa = 11.84RR133 pKa = 11.84HH134 pKa = 5.37RR135 pKa = 11.84RR136 pKa = 11.84TPGRR140 pKa = 11.84TPRR143 pKa = 11.84PCPAWHH149 pKa = 6.25RR150 pKa = 11.84TSSGSRR156 pKa = 11.84RR157 pKa = 11.84RR158 pKa = 11.84RR159 pKa = 11.84RR160 pKa = 11.84VGRR163 pKa = 11.84VRR165 pKa = 11.84WVPVTLTRR173 pKa = 11.84RR174 pKa = 11.84TSSGSASSAIRR185 pKa = 11.84RR186 pKa = 11.84PRR188 pKa = 11.84TGRR191 pKa = 11.84RR192 pKa = 11.84RR193 pKa = 11.84QRR195 pKa = 11.84PVPSPSNSRR204 pKa = 11.84RR205 pKa = 11.84RR206 pKa = 11.84SRR208 pKa = 11.84SPVANHH214 pKa = 6.93RR215 pKa = 11.84GRR217 pKa = 11.84ARR219 pKa = 11.84SSRR222 pKa = 11.84PAANRR227 pKa = 11.84SGQAQSSRR235 pKa = 11.84PAANRR240 pKa = 11.84SGRR243 pKa = 11.84ARR245 pKa = 11.84SSRR248 pKa = 11.84PVASRR253 pKa = 11.84RR254 pKa = 11.84GRR256 pKa = 11.84ARR258 pKa = 11.84SSTRR262 pKa = 11.84RR263 pKa = 11.84RR264 pKa = 11.84ARR266 pKa = 11.84SSSGRR271 pKa = 11.84GSTSRR276 pKa = 11.84RR277 pKa = 11.84GSTSRR282 pKa = 11.84RR283 pKa = 11.84GSTSRR288 pKa = 11.84RR289 pKa = 11.84GSTSGPRR296 pKa = 11.84SRR298 pKa = 11.84RR299 pKa = 11.84ASSGRR304 pKa = 11.84RR305 pKa = 11.84SSHH308 pKa = 6.07RR309 pKa = 11.84ASSSGRR315 pKa = 11.84RR316 pKa = 11.84SNRR319 pKa = 11.84TNNSNGPPSSRR330 pKa = 11.84RR331 pKa = 11.84ASSSGRR337 pKa = 11.84RR338 pKa = 11.84RR339 pKa = 11.84HH340 pKa = 5.39RR341 pKa = 11.84TTSSSGRR348 pKa = 11.84RR349 pKa = 11.84SSNRR353 pKa = 11.84RR354 pKa = 11.84SGRR357 pKa = 11.84SSSPAGRR364 pKa = 11.84RR365 pKa = 11.84RR366 pKa = 11.84NRR368 pKa = 11.84SGPRR372 pKa = 11.84NSSGPARR379 pKa = 11.84RR380 pKa = 11.84TSGLPSRR387 pKa = 11.84SGPRR391 pKa = 11.84SSSGRR396 pKa = 11.84GRR398 pKa = 11.84RR399 pKa = 11.84TSGPRR404 pKa = 11.84RR405 pKa = 11.84SSSNGLRR412 pKa = 11.84SSHH415 pKa = 6.46SGPPSSSPRR424 pKa = 11.84RR425 pKa = 11.84RR426 pKa = 11.84PTSRR430 pKa = 11.84PSPSSPTSPSNGRR443 pKa = 11.84RR444 pKa = 11.84RR445 pKa = 11.84SSSGPHH451 pKa = 5.0PRR453 pKa = 11.84IRR455 pKa = 11.84TTRR458 pKa = 11.84SPGSRR463 pKa = 11.84PPSRR467 pKa = 11.84AGSRR471 pKa = 11.84SPATPRR477 pKa = 11.84PPRR480 pKa = 11.84RR481 pKa = 11.84RR482 pKa = 11.84RR483 pKa = 11.84DD484 pKa = 3.36SRR486 pKa = 11.84SPASPCTTTRR496 pKa = 11.84YY497 pKa = 9.45PGSPSPGSPSPGSPSPGSPSPGSPSPGSRR526 pKa = 11.84CTTTRR531 pKa = 11.84YY532 pKa = 9.41PGSRR536 pKa = 11.84PTGSPSRR543 pKa = 11.84GSPSRR548 pKa = 11.84GSTLSPTRR556 pKa = 3.68

Molecular weight: 59.82 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8789

0

8789

2911538

24

8163

331.3

35.32

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.174 ± 0.044

0.695 ± 0.007

6.157 ± 0.02

5.265 ± 0.024

2.749 ± 0.016

9.185 ± 0.027

2.032 ± 0.012

3.41 ± 0.018

1.652 ± 0.018

10.575 ± 0.038

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.513 ± 0.009

1.728 ± 0.014

6.241 ± 0.024

2.585 ± 0.015

8.131 ± 0.03

5.076 ± 0.017

6.151 ± 0.022

9.129 ± 0.028

1.539 ± 0.01

2.013 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski