Bacterioplanes sanyensis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oceanospirillaceae; Bacterioplanes

Average proteome isoelectric point is 5.97

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3784 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A222FHF0|A0A222FHF0_9GAMM N-acetyltransferase domain-containing protein OS=Bacterioplanes sanyensis OX=1249553 GN=CHH28_04085 PE=4 SV=1
MM1 pKa = 7.61ASSAQAQFIINEE13 pKa = 4.21LDD15 pKa = 3.27ADD17 pKa = 3.93QAGTDD22 pKa = 3.22SAEE25 pKa = 4.33FIEE28 pKa = 6.05LYY30 pKa = 10.76DD31 pKa = 4.39GGLGNQPLDD40 pKa = 3.91GYY42 pKa = 11.15SLVLYY47 pKa = 9.85NGSGSKK53 pKa = 10.15SYY55 pKa = 11.47NSVDD59 pKa = 3.27LSGYY63 pKa = 7.4STNADD68 pKa = 3.11GFFVVCGDD76 pKa = 3.62TAAVANCMLDD86 pKa = 2.57IGTNTNLIQNGADD99 pKa = 3.17AAALYY104 pKa = 9.72ARR106 pKa = 11.84PASDD110 pKa = 4.18FPSNTPVDD118 pKa = 3.91VNGVVDD124 pKa = 4.15ALVYY128 pKa = 8.56DD129 pKa = 4.51TNDD132 pKa = 3.1SDD134 pKa = 4.05ATALLALLNAGQPQVNEE151 pKa = 3.95AAGGDD156 pKa = 3.72KK157 pKa = 10.4DD158 pKa = 3.54AHH160 pKa = 6.29SNQRR164 pKa = 11.84CGDD167 pKa = 4.32GIARR171 pKa = 11.84NTDD174 pKa = 3.38GYY176 pKa = 10.17RR177 pKa = 11.84QQAPTPGAANQCDD190 pKa = 4.89GIDD193 pKa = 3.96PDD195 pKa = 4.78PGIGACGDD203 pKa = 3.73VSHH206 pKa = 7.33SDD208 pKa = 3.51YY209 pKa = 11.42QLISSIQGRR218 pKa = 11.84IEE220 pKa = 4.82DD221 pKa = 4.18SANDD225 pKa = 3.71ASPLNGQTVVVEE237 pKa = 4.26AVVTTDD243 pKa = 3.46LQGGQLANGDD253 pKa = 3.52NSFQYY258 pKa = 10.11SGYY261 pKa = 9.61WLQQLEE267 pKa = 4.38SEE269 pKa = 4.65YY270 pKa = 11.42DD271 pKa = 3.22NDD273 pKa = 3.78AQTSEE278 pKa = 4.71GIFVYY283 pKa = 10.05DD284 pKa = 3.89FRR286 pKa = 11.84SEE288 pKa = 4.08VSVGDD293 pKa = 3.68RR294 pKa = 11.84VRR296 pKa = 11.84LQAQVSEE303 pKa = 5.14FNQSTQLKK311 pKa = 8.75NVADD315 pKa = 4.29LVVCASGQSLPAPVALQLPVSDD337 pKa = 3.43KK338 pKa = 10.13TAWEE342 pKa = 4.09AVEE345 pKa = 4.54GMLVSSQQNLVVSDD359 pKa = 4.37LFGTGYY365 pKa = 11.26GFGNYY370 pKa = 8.93GQFVVSSRR378 pKa = 11.84LHH380 pKa = 4.92FQPTEE385 pKa = 3.91VEE387 pKa = 4.45LPGSAAAQALAAARR401 pKa = 11.84PLDD404 pKa = 4.14ALLIDD409 pKa = 4.74DD410 pKa = 5.42GVAKK414 pKa = 10.2SYY416 pKa = 10.3PAFIPFPDD424 pKa = 3.4EE425 pKa = 4.35SGFSASNPMRR435 pKa = 11.84IGYY438 pKa = 7.29QVPSVSGVMNEE449 pKa = 3.6FRR451 pKa = 11.84DD452 pKa = 4.05NYY454 pKa = 9.76TVIPNNIVIDD464 pKa = 3.93PVAARR469 pKa = 11.84TAAPQVALDD478 pKa = 3.75ADD480 pKa = 4.22LVVVGMNVLNYY491 pKa = 10.14FNGDD495 pKa = 3.22GQGGGFPTSRR505 pKa = 11.84GAPSAAAFEE514 pKa = 4.26MQTAKK519 pKa = 10.2IVAALQAMDD528 pKa = 4.03ADD530 pKa = 3.68IVGLMEE536 pKa = 5.2IEE538 pKa = 3.83NDD540 pKa = 4.14GYY542 pKa = 11.7GSDD545 pKa = 3.55SAIASLVNALNAVQAAGDD563 pKa = 3.82EE564 pKa = 4.31YY565 pKa = 10.83TYY567 pKa = 11.44VNPGRR572 pKa = 11.84NQVGTDD578 pKa = 4.18AIAVGLLYY586 pKa = 10.58RR587 pKa = 11.84PAKK590 pKa = 10.28VSLEE594 pKa = 4.06GASVILDD601 pKa = 3.66SSNSPLDD608 pKa = 3.53DD609 pKa = 3.18TGAPLFIDD617 pKa = 3.52NKK619 pKa = 10.15NRR621 pKa = 11.84PSLIQSFRR629 pKa = 11.84YY630 pKa = 9.5NDD632 pKa = 3.59TVFTLSVNHH641 pKa = 6.54LKK643 pKa = 10.89SKK645 pKa = 10.51GSPCGEE651 pKa = 4.1PNEE654 pKa = 4.54GEE656 pKa = 4.17NGVGSCNLTRR666 pKa = 11.84TTAAQALVQFLATNPTGVDD685 pKa = 3.0SDD687 pKa = 3.7ATLILGDD694 pKa = 4.17LNAYY698 pKa = 8.29SQEE701 pKa = 4.24DD702 pKa = 3.95PMQVFYY708 pKa = 11.12QGGFTNLKK716 pKa = 8.26YY717 pKa = 9.15TDD719 pKa = 4.2KK720 pKa = 11.11VSEE723 pKa = 4.09QQPFSYY729 pKa = 10.4SFSGFLGSLDD739 pKa = 3.66HH740 pKa = 7.12ALASPSLLNHH750 pKa = 5.64VVSVDD755 pKa = 2.75AWHH758 pKa = 6.76INSVEE763 pKa = 4.04APLMDD768 pKa = 4.34YY769 pKa = 9.71LTEE772 pKa = 4.85ANGQDD777 pKa = 3.78FDD779 pKa = 6.38SIDD782 pKa = 3.38NYY784 pKa = 11.14AAADD788 pKa = 3.95AYY790 pKa = 10.59RR791 pKa = 11.84SSDD794 pKa = 3.13HH795 pKa = 7.23DD796 pKa = 4.79PIVLGLSFAAANQAPQQSDD815 pKa = 4.21DD816 pKa = 3.65IADD819 pKa = 3.79VALEE823 pKa = 4.06QADD826 pKa = 3.88TLYY829 pKa = 11.12SIDD832 pKa = 3.59LSQYY836 pKa = 10.65FIDD839 pKa = 4.81ADD841 pKa = 3.94GDD843 pKa = 4.0ALSYY847 pKa = 10.9EE848 pKa = 4.74LDD850 pKa = 3.69GQQAGITLLATGEE863 pKa = 4.22LQVQLTAEE871 pKa = 4.24QLDD874 pKa = 4.2SLPLTLAFAVTDD886 pKa = 4.35GQASIAATITLLDD899 pKa = 3.59QRR901 pKa = 11.84PAQSPWQRR909 pKa = 11.84WWQWLQDD916 pKa = 3.18WWKK919 pKa = 10.66SLWDD923 pKa = 3.52

Molecular weight: 97.77 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A222FFY9|A0A222FFY9_9GAMM Trk system potassium uptake protein OS=Bacterioplanes sanyensis OX=1249553 GN=CHH28_04520 PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVLKK11 pKa = 10.49RR12 pKa = 11.84KK13 pKa = 7.97RR14 pKa = 11.84THH16 pKa = 5.89GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.4NGRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.16GRR39 pKa = 11.84HH40 pKa = 4.64VLSAA44 pKa = 3.81

Molecular weight: 5.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3784

0

3784

1254103

37

6764

331.4

36.72

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.042 ± 0.04

1.009 ± 0.017

5.999 ± 0.034

5.74 ± 0.038

3.55 ± 0.023

7.002 ± 0.04

2.541 ± 0.022

5.037 ± 0.028

3.361 ± 0.032

10.993 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.497 ± 0.022

3.434 ± 0.029

4.27 ± 0.025

6.151 ± 0.046

5.75 ± 0.036

6.419 ± 0.04

4.981 ± 0.031

6.874 ± 0.038

1.564 ± 0.02

2.785 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski