Apis mellifera associated microvirus 26

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 7.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3Q8U5T1|A0A3Q8U5T1_9VIRU Uncharacterized protein OS=Apis mellifera associated microvirus 26 OX=2494754 PE=4 SV=1
MM1 pKa = 7.04LQKK4 pKa = 10.71LFAIRR9 pKa = 11.84DD10 pKa = 3.68SKK12 pKa = 10.17TEE14 pKa = 3.8YY15 pKa = 10.32FGSPFCKK22 pKa = 9.37ATHH25 pKa = 6.51GEE27 pKa = 3.97AEE29 pKa = 3.96RR30 pKa = 11.84DD31 pKa = 3.43FRR33 pKa = 11.84TLVNDD38 pKa = 3.66EE39 pKa = 4.29KK40 pKa = 10.78TNLNQYY46 pKa = 9.92PEE48 pKa = 5.63DD49 pKa = 3.85YY50 pKa = 10.79DD51 pKa = 4.45LYY53 pKa = 11.7YY54 pKa = 10.91LGEE57 pKa = 4.13YY58 pKa = 10.31DD59 pKa = 3.69NNSGKK64 pKa = 10.39FEE66 pKa = 4.18TLEE69 pKa = 4.33TPQHH73 pKa = 5.69LMKK76 pKa = 10.72AIQVKK81 pKa = 9.61KK82 pKa = 10.26QPEE85 pKa = 4.07VV86 pKa = 3.16

Molecular weight: 10.13 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3S8UU31|A0A3S8UU31_9VIRU Internal scaffolding protein OS=Apis mellifera associated microvirus 26 OX=2494754 PE=4 SV=1
MM1 pKa = 7.64NLIQRR6 pKa = 11.84NKK8 pKa = 10.58NEE10 pKa = 4.08TPLRR14 pKa = 11.84TRR16 pKa = 11.84SGVHH20 pKa = 5.3PQNPFKK26 pKa = 10.22RR27 pKa = 11.84TKK29 pKa = 9.45TALEE33 pKa = 4.03PKK35 pKa = 8.55PCVRR39 pKa = 11.84ATRR42 pKa = 11.84VRR44 pKa = 11.84EE45 pKa = 3.71KK46 pKa = 10.32WLLGPFSFVKK56 pKa = 10.61SPSLPPSPSPMCEE69 pKa = 4.1KK70 pKa = 10.45ILTSSPMCCTKK81 pKa = 10.21QHH83 pKa = 5.52NPRR86 pKa = 11.84RR87 pKa = 11.84NAAA90 pKa = 3.37

Molecular weight: 10.22 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1378

83

525

196.9

22.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.2 ± 1.204

0.508 ± 0.346

4.717 ± 1.022

6.096 ± 0.818

4.209 ± 1.117

5.515 ± 0.536

2.758 ± 0.548

4.499 ± 0.395

7.837 ± 2.097

7.257 ± 0.526

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.54 ± 0.241

5.443 ± 0.728

6.894 ± 1.228

4.427 ± 0.353

5.515 ± 0.636

7.112 ± 1.02

6.241 ± 0.929

4.935 ± 0.716

1.814 ± 0.267

3.483 ± 0.855
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski