Candidatus Hepatoplasma crinochetorum Av

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Tenericutes; Mollicutes; Mycoplasmatales; Mycoplasmataceae; Candidatus Hepatoplasma; Candidatus Hepatoplasma crinochetorum

Average proteome isoelectric point is 7.92

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 582 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W8GMW0|W8GMW0_9MOLU Isoleucine--tRNA ligase OS=Candidatus Hepatoplasma crinochetorum Av OX=1427984 GN=ileS PE=3 SV=1
MM1 pKa = 7.97IDD3 pKa = 3.27GCNGGNIDD11 pKa = 4.07ILSINTINYY20 pKa = 8.81NSEE23 pKa = 3.91GEE25 pKa = 4.25KK26 pKa = 8.61TQKK29 pKa = 9.98EE30 pKa = 4.26VNEE33 pKa = 4.37TNKK36 pKa = 10.38EE37 pKa = 4.14AIDD40 pKa = 4.06DD41 pKa = 4.85LINNNMVDD49 pKa = 4.05TDD51 pKa = 3.8HH52 pKa = 6.19VTYY55 pKa = 9.91TVLGNTSTEE64 pKa = 3.81AFGDD68 pKa = 4.05FTQADD73 pKa = 3.74EE74 pKa = 4.3KK75 pKa = 11.41LYY77 pKa = 11.33GEE79 pKa = 4.48STNDD83 pKa = 3.09TVVRR87 pKa = 11.84DD88 pKa = 3.81NTLLGLTDD96 pKa = 4.48GLQDD100 pKa = 4.95QIDD103 pKa = 4.19GLNTAVNNLGDD114 pKa = 4.57IINNAIGDD122 pKa = 4.01IKK124 pKa = 11.16ASLDD128 pKa = 3.64SLSTCKK134 pKa = 10.5DD135 pKa = 3.35CSIDD139 pKa = 3.76PFPSAIIDD147 pKa = 3.97NIVPTDD153 pKa = 3.59PTTEE157 pKa = 4.45DD158 pKa = 3.44GNGTVSFDD166 pKa = 4.65VYY168 pKa = 11.26LSDD171 pKa = 5.45CNGTSIAVLNPASGTEE187 pKa = 4.32PITLSEE193 pKa = 4.71GINTGLTFTDD203 pKa = 5.1LPPGYY208 pKa = 10.54YY209 pKa = 10.17NIEE212 pKa = 4.32VYY214 pKa = 10.73CDD216 pKa = 3.26TEE218 pKa = 5.84LIDD221 pKa = 3.54NTSFIINDD229 pKa = 3.52YY230 pKa = 11.06DD231 pKa = 3.92SSEE234 pKa = 4.51DD235 pKa = 3.44GGGDD239 pKa = 3.54EE240 pKa = 5.03EE241 pKa = 6.1IIDD244 pKa = 4.46IVTPDD249 pKa = 4.78DD250 pKa = 4.27GSLIPPNSNDD260 pKa = 2.89IPVNDD265 pKa = 4.51GEE267 pKa = 4.66DD268 pKa = 3.64FNHH271 pKa = 6.84ILMITKK277 pKa = 10.4GNLIPEE283 pKa = 4.35NNIQCYY289 pKa = 9.59QNLFIVGSDD298 pKa = 3.46FNLNEE303 pKa = 3.95WTTGCLNSFNPNDD316 pKa = 3.9PQGDD320 pKa = 3.59EE321 pKa = 4.73CYY323 pKa = 10.68VAIKK327 pKa = 9.35RR328 pKa = 11.84TSDD331 pKa = 3.03NTFDD335 pKa = 3.54TTRR338 pKa = 11.84EE339 pKa = 4.16SVSNSVKK346 pKa = 10.02GLNWIKK352 pKa = 10.78AIDD355 pKa = 4.41NITITKK361 pKa = 9.68ILEE364 pKa = 4.24NGAFGYY370 pKa = 10.7GDD372 pKa = 3.48KK373 pKa = 10.83FVLNEE378 pKa = 4.62DD379 pKa = 3.56YY380 pKa = 11.18TNYY383 pKa = 11.11DD384 pKa = 3.94LIISKK389 pKa = 9.54WYY391 pKa = 9.93FNTSAGTAVKK401 pKa = 9.12PQYY404 pKa = 10.29GYY406 pKa = 9.78PIRR409 pKa = 11.84EE410 pKa = 3.91ISDD413 pKa = 4.77LIVTNTWLQKK423 pKa = 8.94QHH425 pKa = 5.66GSNVSYY431 pKa = 10.7SGEE434 pKa = 3.97LTFTDD439 pKa = 4.02TLNGTVTKK447 pKa = 10.61ARR449 pKa = 11.84EE450 pKa = 4.04SDD452 pKa = 3.99FLATMWGVNGIPAPIDD468 pKa = 3.42LNAQVSGTIINMDD481 pKa = 4.28DD482 pKa = 3.55YY483 pKa = 12.02SNADD487 pKa = 3.55FLLINCTYY495 pKa = 11.37ADD497 pKa = 3.47IGNTQLMYY505 pKa = 11.0AKK507 pKa = 10.3DD508 pKa = 3.31IVYY511 pKa = 10.45DD512 pKa = 3.32GTTRR516 pKa = 11.84YY517 pKa = 10.84DD518 pKa = 3.33FVGIGACYY526 pKa = 10.12FSFNVDD532 pKa = 2.88KK533 pKa = 10.53TINIIDD539 pKa = 3.93AALSAEE545 pKa = 4.45IIITSIKK552 pKa = 10.36KK553 pKa = 10.22IILL556 pKa = 3.78

Molecular weight: 60.7 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W8GEA7|W8GEA7_9MOLU Single-stranded DNA-binding protein OS=Candidatus Hepatoplasma crinochetorum Av OX=1427984 GN=ssb PE=3 SV=1
MM1 pKa = 7.35KK2 pKa = 9.42RR3 pKa = 11.84TYY5 pKa = 10.38QPNKK9 pKa = 8.29RR10 pKa = 11.84KK11 pKa = 9.61KK12 pKa = 10.05AKK14 pKa = 8.31THH16 pKa = 5.38GFRR19 pKa = 11.84ARR21 pKa = 11.84KK22 pKa = 8.03ATKK25 pKa = 9.69QGQKK29 pKa = 8.5VVKK32 pKa = 9.76SRR34 pKa = 11.84RR35 pKa = 11.84SKK37 pKa = 10.68GRR39 pKa = 11.84KK40 pKa = 9.07KK41 pKa = 9.85LTNN44 pKa = 3.53

Molecular weight: 5.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

582

0

582

201572

30

1935

346.3

40.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.943 ± 0.094

0.374 ± 0.022

5.795 ± 0.102

6.576 ± 0.091

6.074 ± 0.127

4.733 ± 0.114

1.106 ± 0.032

11.724 ± 0.106

11.373 ± 0.214

9.678 ± 0.107

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.419 ± 0.037

9.137 ± 0.14

2.264 ± 0.041

3.029 ± 0.059

2.531 ± 0.075

5.91 ± 0.079

4.496 ± 0.115

4.118 ± 0.078

0.968 ± 0.041

4.752 ± 0.096
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski