Fly associated circular virus 6

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 7.38

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A346BPC5|A0A346BPC5_9VIRU Putative capsid protein OS=Fly associated circular virus 6 OX=2293286 PE=4 SV=1
MM1 pKa = 7.82AGGARR6 pKa = 11.84NWCGTLQLEE15 pKa = 4.92DD16 pKa = 5.18DD17 pKa = 4.49DD18 pKa = 4.64WDD20 pKa = 4.52AEE22 pKa = 4.34TWLEE26 pKa = 4.24SLVRR30 pKa = 11.84DD31 pKa = 4.13EE32 pKa = 3.98KK33 pKa = 11.21AKK35 pKa = 10.74YY36 pKa = 9.99VVGQIEE42 pKa = 4.26RR43 pKa = 11.84GHH45 pKa = 5.12EE46 pKa = 3.97TEE48 pKa = 4.29HH49 pKa = 6.64AHH51 pKa = 5.82LQFYY55 pKa = 7.16VQCLSQKK62 pKa = 10.26NLVWMKK68 pKa = 11.01RR69 pKa = 11.84NINDD73 pKa = 3.47KK74 pKa = 10.9AHH76 pKa = 6.63WEE78 pKa = 4.22TAKK81 pKa = 9.75GTAKK85 pKa = 10.44HH86 pKa = 5.41NRR88 pKa = 11.84AYY90 pKa = 8.9CTKK93 pKa = 9.0EE94 pKa = 3.74DD95 pKa = 3.63SRR97 pKa = 11.84VRR99 pKa = 11.84GPWEE103 pKa = 3.8FGEE106 pKa = 4.72IVQQGQRR113 pKa = 11.84EE114 pKa = 4.24GLEE117 pKa = 4.16SAIKK121 pKa = 9.09MVKK124 pKa = 9.96EE125 pKa = 3.73GAPLKK130 pKa = 10.73DD131 pKa = 2.96IALEE135 pKa = 3.92QSVVWVHH142 pKa = 5.28HH143 pKa = 6.15HH144 pKa = 6.79RR145 pKa = 11.84GLMDD149 pKa = 3.74LRR151 pKa = 11.84KK152 pKa = 9.54QLGLEE157 pKa = 3.53ADD159 pKa = 3.36RR160 pKa = 11.84RR161 pKa = 11.84YY162 pKa = 10.55FGVDD166 pKa = 3.76GPEE169 pKa = 4.32VWCLWGPSGTGKK181 pKa = 10.36SRR183 pKa = 11.84WVNAKK188 pKa = 9.52WPDD191 pKa = 3.85AFWKK195 pKa = 10.38IPNEE199 pKa = 4.1KK200 pKa = 8.78WWDD203 pKa = 3.68GYY205 pKa = 9.32TGQEE209 pKa = 4.07TVILDD214 pKa = 3.71DD215 pKa = 5.26FKK217 pKa = 11.64DD218 pKa = 3.41GDD220 pKa = 3.81MRR222 pKa = 11.84LGDD225 pKa = 4.32LQRR228 pKa = 11.84LLDD231 pKa = 4.47WYY233 pKa = 9.17PLWVEE238 pKa = 4.35VKK240 pKa = 10.63GGTIPMLAKK249 pKa = 10.18RR250 pKa = 11.84YY251 pKa = 9.76VFTCNTHH258 pKa = 5.62PSSWYY263 pKa = 10.04RR264 pKa = 11.84KK265 pKa = 8.75ADD267 pKa = 3.33PHH269 pKa = 5.02RR270 pKa = 11.84TIMRR274 pKa = 11.84RR275 pKa = 11.84FDD277 pKa = 3.06EE278 pKa = 4.67FAAQKK283 pKa = 10.58GRR285 pKa = 11.84LIMCEE290 pKa = 3.74TDD292 pKa = 2.79DD293 pKa = 4.3WEE295 pKa = 4.88INLEE299 pKa = 4.13TRR301 pKa = 11.84LGDD304 pKa = 3.76LGNPQTPEE312 pKa = 3.68VGGNTSTPTSGAPLRR327 pKa = 11.84VPEE330 pKa = 4.11NSEE333 pKa = 4.95DD334 pKa = 3.51IMIPSPMDD342 pKa = 3.71FYY344 pKa = 12.01VV345 pKa = 3.06

Molecular weight: 39.84 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A346BPC5|A0A346BPC5_9VIRU Putative capsid protein OS=Fly associated circular virus 6 OX=2293286 PE=4 SV=1
MM1 pKa = 7.09AWSRR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84TRR9 pKa = 11.84FQRR12 pKa = 11.84QRR14 pKa = 11.84PRR16 pKa = 11.84RR17 pKa = 11.84LRR19 pKa = 11.84RR20 pKa = 11.84ARR22 pKa = 11.84RR23 pKa = 11.84LTRR26 pKa = 11.84TRR28 pKa = 11.84FRR30 pKa = 11.84RR31 pKa = 11.84YY32 pKa = 9.02RR33 pKa = 11.84PRR35 pKa = 11.84GGGTRR40 pKa = 11.84SATVKK45 pKa = 9.47LTAEE49 pKa = 3.99TTYY52 pKa = 11.35APWQGPLTNVQAGWKK67 pKa = 8.59PVAFTPQNLQGFNDD81 pKa = 3.83YY82 pKa = 11.07QSVYY86 pKa = 10.44SQFRR90 pKa = 11.84VKK92 pKa = 10.59KK93 pKa = 9.84CVVKK97 pKa = 10.68INRR100 pKa = 11.84GPDD103 pKa = 3.1TNLVYY108 pKa = 10.78LVVPSRR114 pKa = 11.84AFAQTAAPSSSIANSWLAYY133 pKa = 9.96VPPQTEE139 pKa = 3.47QALRR143 pKa = 11.84QTRR146 pKa = 11.84WQKK149 pKa = 11.06EE150 pKa = 4.06LMPSTTAGKK159 pKa = 10.23VRR161 pKa = 11.84FGFHH165 pKa = 7.7PYY167 pKa = 10.38TMITAMGPIAQGQSINFTRR186 pKa = 11.84VWNLNKK192 pKa = 7.35WTPMSWALAQYY203 pKa = 9.28PMYY206 pKa = 10.18MYY208 pKa = 10.93GPYY211 pKa = 10.51LCLNNALTNADD222 pKa = 3.92PDD224 pKa = 3.8LTTSVSCIIEE234 pKa = 4.47CYY236 pKa = 10.22FQFKK240 pKa = 9.02GQKK243 pKa = 9.15

Molecular weight: 28.07 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

588

243

345

294.0

33.95

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.973 ± 1.104

1.701 ± 0.036

5.102 ± 2.285

5.272 ± 2.397

3.401 ± 0.744

7.313 ± 1.298

1.871 ± 0.965

3.401 ± 0.344

5.272 ± 0.765

7.313 ± 0.482

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.891 ± 0.007

4.082 ± 0.566

5.952 ± 0.962

5.442 ± 1.299

8.333 ± 1.564

4.592 ± 0.773

7.143 ± 1.535

5.952 ± 0.126

4.422 ± 0.747

3.571 ± 0.904
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski