Loktanella sp. 3ANDIMAR09

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Loktanella; unclassified Loktanella

Average proteome isoelectric point is 6.07

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3527 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A0Q2YX32|A0A0Q2YX32_9RHOB Uncharacterized protein OS=Loktanella sp. 3ANDIMAR09 OX=1225657 GN=AN189_14305 PE=4 SV=1
MM1 pKa = 7.62EE2 pKa = 5.32KK3 pKa = 10.57FRR5 pKa = 11.84WTLSARR11 pKa = 11.84ASRR14 pKa = 11.84AAAFLAFLLQICVATVAGATPFTMTVPGTGVQLPAEE50 pKa = 4.34YY51 pKa = 9.08PQAGGVAIVMTGVNGNIYY69 pKa = 10.12YY70 pKa = 10.25QFSNPDD76 pKa = 3.04GAFVGFQNTGTPTRR90 pKa = 11.84FRR92 pKa = 11.84GNPFTINDD100 pKa = 5.89PIPLDD105 pKa = 3.93CGFRR109 pKa = 11.84SCTDD113 pKa = 3.26YY114 pKa = 11.34FGGAIARR121 pKa = 11.84VDD123 pKa = 3.32IRR125 pKa = 11.84FSALDD130 pKa = 3.47GDD132 pKa = 4.42TQVGGFDD139 pKa = 3.81RR140 pKa = 11.84NDD142 pKa = 2.76IFLILNGVNVGNWSDD157 pKa = 3.53VTTQATNEE165 pKa = 3.99AGTTSFSTQQGFGNNTFDD183 pKa = 3.75TGWFSSTNAALLGNILQANQTVTQVFDD210 pKa = 4.37RR211 pKa = 11.84DD212 pKa = 3.84PNDD215 pKa = 3.49NFWDD219 pKa = 4.62FTRR222 pKa = 11.84GNSLPQDD229 pKa = 4.94DD230 pKa = 5.0IRR232 pKa = 11.84TIAPGYY238 pKa = 8.98EE239 pKa = 3.84FEE241 pKa = 5.79KK242 pKa = 10.61IIDD245 pKa = 4.1SADD248 pKa = 3.1LTYY251 pKa = 11.15AQVGDD256 pKa = 4.34IIDD259 pKa = 3.34YY260 pKa = 10.62SYY262 pKa = 11.51VVRR265 pKa = 11.84NIGSVDD271 pKa = 3.0IDD273 pKa = 5.08DD274 pKa = 4.06ITVEE278 pKa = 4.64DD279 pKa = 4.06DD280 pKa = 4.15RR281 pKa = 11.84IPNVVCPAPPQNSLRR296 pKa = 11.84RR297 pKa = 11.84TRR299 pKa = 11.84GGDD302 pKa = 3.11PTANEE307 pKa = 4.18LTCTGTYY314 pKa = 10.18RR315 pKa = 11.84ITQADD320 pKa = 3.3IDD322 pKa = 4.18AGQVTNIASANGTPEE337 pKa = 3.82FGEE340 pKa = 4.3LGEE343 pKa = 4.41VTDD346 pKa = 4.15TATTTGPALVNTITLDD362 pKa = 3.36KK363 pKa = 11.05VGAPDD368 pKa = 3.52PFGPVGSQVTYY379 pKa = 10.45TLTATNTGTSTLRR392 pKa = 11.84DD393 pKa = 3.68VLITDD398 pKa = 4.08PRR400 pKa = 11.84TPGQTCTFPTLLPLSADD417 pKa = 3.31NATNTASCTVTYY429 pKa = 9.69TVTQADD435 pKa = 3.29VDD437 pKa = 3.99AFALNGTTLDD447 pKa = 3.25NTATVRR453 pKa = 11.84ATPPNGPAITATASDD468 pKa = 4.55ALPGQPAVVSLTLVKK483 pKa = 10.46SALQSTYY490 pKa = 11.17DD491 pKa = 3.41AVGDD495 pKa = 3.91VIDD498 pKa = 4.48YY499 pKa = 10.73RR500 pKa = 11.84FTINNTGTVTWPGPPTLTDD519 pKa = 3.49TLTGGASCPAGPVAPGGTVVCEE541 pKa = 3.81ASYY544 pKa = 10.31TILQADD550 pKa = 4.48LDD552 pKa = 4.17AGVRR556 pKa = 11.84PNEE559 pKa = 3.63ATAAITVAGQTAQATDD575 pKa = 4.05DD576 pKa = 3.83VTVTAVVTTGLTLSKK591 pKa = 10.33ALQAGSPNTFDD602 pKa = 3.44APGVVLTYY610 pKa = 11.25NFVLTNTGTVTLTNPVVDD628 pKa = 5.05DD629 pKa = 3.73ATTAPTVTPVPVTCPAGPIAPGGTLTCSADD659 pKa = 3.69YY660 pKa = 11.1AVTQADD666 pKa = 4.01LDD668 pKa = 4.09AGAVSNTATAAATAPPGAGGGQVLSGPQSLTVTAEE703 pKa = 3.53RR704 pKa = 11.84RR705 pKa = 11.84PALNIVKK712 pKa = 8.15TAPTLTALQFSALPVVTYY730 pKa = 9.53TYY732 pKa = 11.36DD733 pKa = 3.26VTNSGNVTIPGPITVTDD750 pKa = 4.6DD751 pKa = 3.43KK752 pKa = 11.39LSPQTFTCTGAAIAVGDD769 pKa = 4.35SVQCTATYY777 pKa = 10.35QVTPTDD783 pKa = 3.43VARR786 pKa = 11.84QSVRR790 pKa = 11.84NTAFATGGDD799 pKa = 3.77GTVSNTDD806 pKa = 3.5DD807 pKa = 4.63AVIAPAGRR815 pKa = 11.84LDD817 pKa = 3.5IQLEE821 pKa = 4.29KK822 pKa = 10.79QAVTTDD828 pKa = 4.01FAAVGDD834 pKa = 4.22PVDD837 pKa = 4.0FTLTFTNTGDD847 pKa = 3.36FTLFPEE853 pKa = 4.67TDD855 pKa = 2.97SSALDD860 pKa = 3.51RR861 pKa = 11.84YY862 pKa = 10.18EE863 pKa = 3.86LTDD866 pKa = 4.05PGVSGLDD873 pKa = 3.16SCIIPNPLFPQGGAQTPTQFTCTVTRR899 pKa = 11.84IITQADD905 pKa = 3.34VDD907 pKa = 3.95AGSYY911 pKa = 10.12TNTAFLTMIYY921 pKa = 10.42NQGQVNEE928 pKa = 4.33EE929 pKa = 4.32TQVVPPASDD938 pKa = 3.54TVPLNANVVPSFTLTKK954 pKa = 9.97TATNDD959 pKa = 3.13YY960 pKa = 10.06GAVGDD965 pKa = 4.06TINYY969 pKa = 9.43DD970 pKa = 3.73FEE972 pKa = 4.53VTNTSVLTLTNVVLTDD988 pKa = 3.76PKK990 pKa = 10.24IGSISCVGSATANEE1004 pKa = 4.5TGTIAPGASALCTGSYY1020 pKa = 10.42EE1021 pKa = 4.17VTQADD1026 pKa = 3.85LDD1028 pKa = 4.0AEE1030 pKa = 4.38QVVNTVSALAQTQAAGSVTQTAQEE1054 pKa = 3.93ITPIDD1059 pKa = 3.56PAAATRR1065 pKa = 11.84ALSLTKK1071 pKa = 9.94IVTVRR1076 pKa = 11.84EE1077 pKa = 4.05TGDD1080 pKa = 3.25ATFTAPGQTADD1091 pKa = 3.42YY1092 pKa = 10.46SFVVEE1097 pKa = 4.05NTGNLTLDD1105 pKa = 3.98NIAVVDD1111 pKa = 3.88ADD1113 pKa = 5.17LGYY1116 pKa = 8.65TCQIPTLAPGATDD1129 pKa = 3.28TATCSASRR1137 pKa = 11.84VLTQADD1143 pKa = 4.05FDD1145 pKa = 4.19AGSYY1149 pKa = 10.38QNDD1152 pKa = 3.21AVARR1156 pKa = 11.84AAGADD1161 pKa = 3.9DD1162 pKa = 4.66APASATATAQGRR1174 pKa = 11.84IASFDD1179 pKa = 3.84FVKK1182 pKa = 10.61SAPASFAVAGEE1193 pKa = 4.11VVDD1196 pKa = 5.73FVFAFTNTGTVTLTDD1211 pKa = 3.33ITIVDD1216 pKa = 4.02PLLGVAYY1223 pKa = 9.72ACEE1226 pKa = 4.14ITSIAPGVTDD1236 pKa = 3.68NSCFGSYY1243 pKa = 8.4EE1244 pKa = 4.02VQPADD1249 pKa = 3.25VDD1251 pKa = 3.56AGQIQNDD1258 pKa = 3.37ASFTGVGLDD1267 pKa = 3.62GAPISGDD1274 pKa = 3.1DD1275 pKa = 3.71TVIVTGPAEE1284 pKa = 4.29APALTVTKK1292 pKa = 10.74VEE1294 pKa = 4.53DD1295 pKa = 4.42DD1296 pKa = 3.67GTGTFDD1302 pKa = 4.09NLPATEE1308 pKa = 4.52SYY1310 pKa = 11.29SFVVTNTGNVTLTDD1324 pKa = 4.33LSLVDD1329 pKa = 4.6DD1330 pKa = 4.37LTGFSCALPDD1340 pKa = 4.23LAAGAATSLCADD1352 pKa = 4.69GAPLTDD1358 pKa = 4.1SYY1360 pKa = 11.76TVLQTDD1366 pKa = 3.33IDD1368 pKa = 4.06AGALEE1373 pKa = 4.29NTATATGRR1381 pKa = 11.84TTRR1384 pKa = 11.84GAGVPVEE1391 pKa = 4.64ASDD1394 pKa = 3.75TVTLQGPAQLPVISMVKK1411 pKa = 8.9TATAGAGFSALGDD1424 pKa = 3.88TVSYY1428 pKa = 10.78DD1429 pKa = 3.49YY1430 pKa = 11.34TVTNDD1435 pKa = 3.27GNITLTAPITVTDD1448 pKa = 3.63DD1449 pKa = 3.36RR1450 pKa = 11.84VTVSCPALPAAGLAPGADD1468 pKa = 3.51IVCTATDD1475 pKa = 3.61TVDD1478 pKa = 4.66QADD1481 pKa = 4.04LDD1483 pKa = 3.85AGEE1486 pKa = 4.61IVNTATANVRR1496 pKa = 11.84QPVSPSATYY1505 pKa = 9.4PGGVAEE1511 pKa = 4.32VSSNTEE1517 pKa = 4.15TVTVTADD1524 pKa = 3.37QQPALAITKK1533 pKa = 9.63RR1534 pKa = 11.84VKK1536 pKa = 10.48PGTATSFDD1544 pKa = 3.83APGDD1548 pKa = 3.64LSDD1551 pKa = 5.02PGNPNNLVYY1560 pKa = 10.65EE1561 pKa = 4.85FIVEE1565 pKa = 3.98NTGNVTTTDD1574 pKa = 5.12PITVTDD1580 pKa = 4.45PLISATPLVCTTDD1593 pKa = 3.58PLAPGGTVTCEE1604 pKa = 3.57LPYY1607 pKa = 10.99APTQEE1612 pKa = 4.23DD1613 pKa = 3.26VDD1615 pKa = 3.97RR1616 pKa = 11.84GFFANSADD1624 pKa = 3.17AATRR1628 pKa = 11.84FNGAPVQTPAPGTEE1642 pKa = 4.08TVNAVQRR1649 pKa = 11.84PALTIVKK1656 pKa = 8.64TLEE1659 pKa = 4.05DD1660 pKa = 3.77LAIFSPGEE1668 pKa = 3.38IATYY1672 pKa = 10.34RR1673 pKa = 11.84FYY1675 pKa = 10.89VTNTGNTTITGPVTVTDD1692 pKa = 3.95NKK1694 pKa = 10.1IAGPIDD1700 pKa = 4.37CGPGDD1705 pKa = 4.53LAPGDD1710 pKa = 4.05STACLATYY1718 pKa = 8.42TVTVNDD1724 pKa = 3.58VNAGSVTNSASASNGVTTSDD1744 pKa = 3.95PQSLTIPVGAEE1755 pKa = 3.6PTLSIVKK1762 pKa = 7.61TAPGGVFAQAGDD1774 pKa = 3.71VIAYY1778 pKa = 7.63EE1779 pKa = 4.19FLVTNTSSGPIPPAFVQPVTVIDD1802 pKa = 4.5DD1803 pKa = 4.56KK1804 pKa = 10.78ITTPIVCPVVDD1815 pKa = 4.53GANPLDD1821 pKa = 4.3PGEE1824 pKa = 5.37SITCTGSYY1832 pKa = 8.94TVQQADD1838 pKa = 3.71LDD1840 pKa = 4.0AVRR1843 pKa = 11.84PGFTRR1848 pKa = 11.84GFVINNAFARR1858 pKa = 11.84SEE1860 pKa = 4.04FAGEE1864 pKa = 4.09LVEE1867 pKa = 5.17SPVDD1871 pKa = 3.64QVIITADD1878 pKa = 3.75SVPLLGVVKK1887 pKa = 9.3TAEE1890 pKa = 4.09NQTNPGQDD1898 pKa = 2.86AAAGDD1903 pKa = 4.08VVAFTIVSQNDD1914 pKa = 4.02GPQTLTDD1921 pKa = 3.57VRR1923 pKa = 11.84VTDD1926 pKa = 4.13PFLGALSCDD1935 pKa = 2.94IASPVTLAPGAALTCTGSYY1954 pKa = 9.35TVTQADD1960 pKa = 3.47VDD1962 pKa = 3.87AGGPISNTADD1972 pKa = 3.15AAATTTQGEE1981 pKa = 4.57AVSGTDD1987 pKa = 2.95TTTYY1991 pKa = 10.21PVAAPLPAMQVAKK2004 pKa = 10.5ALEE2007 pKa = 4.6PGSGQNDD2014 pKa = 4.23YY2015 pKa = 9.48NTVGEE2020 pKa = 4.4DD2021 pKa = 3.0LTFRR2025 pKa = 11.84VTVTNTGNITLNDD2038 pKa = 3.49VAVTDD2043 pKa = 4.26DD2044 pKa = 4.99LVPGTCTVPTLAPGASDD2061 pKa = 3.66TSCVFVYY2068 pKa = 9.15TVQQADD2074 pKa = 3.43IDD2076 pKa = 4.05RR2077 pKa = 11.84GTITNIATAQAQPANPGAPEE2097 pKa = 4.85LIEE2100 pKa = 4.45TGQSDD2105 pKa = 3.56ITGPAAEE2112 pKa = 4.87PGVGLSKK2119 pKa = 9.84TGSGEE2124 pKa = 3.92VTASDD2129 pKa = 4.24GSPTFNLPNQSLTYY2143 pKa = 9.93VYY2145 pKa = 10.68EE2146 pKa = 4.11VVNLGNVTLNQLPAITDD2163 pKa = 3.47DD2164 pKa = 4.96RR2165 pKa = 11.84IDD2167 pKa = 4.58SVTCDD2172 pKa = 3.94PLPAAGLLPGEE2183 pKa = 4.32VLICRR2188 pKa = 11.84GSDD2191 pKa = 2.95TVDD2194 pKa = 3.31QNDD2197 pKa = 2.94VDD2199 pKa = 4.46AGFVTNIADD2208 pKa = 3.46VTVANDD2214 pKa = 3.35YY2215 pKa = 11.34GGAPLTAQAQEE2226 pKa = 4.5TITATVAPDD2235 pKa = 3.41LAITKK2240 pKa = 8.44TPSITQNATAGTEE2253 pKa = 3.79VTYY2256 pKa = 10.26SYY2258 pKa = 10.97RR2259 pKa = 11.84VQNPGNVTLTDD2270 pKa = 3.05ITLTDD2275 pKa = 4.01FHH2277 pKa = 6.72TSAAGVVDD2285 pKa = 5.42LPISDD2290 pKa = 4.21GGVIATLAPGEE2301 pKa = 4.35EE2302 pKa = 4.26ATLTATYY2309 pKa = 9.51TVTQDD2314 pKa = 5.55DD2315 pKa = 4.23IDD2317 pKa = 3.83SGNAVRR2323 pKa = 11.84NTVRR2327 pKa = 11.84VTSTLPGGDD2336 pKa = 4.07AGPAPLTRR2344 pKa = 11.84ARR2346 pKa = 11.84VDD2348 pKa = 4.2LDD2350 pKa = 3.38PQRR2353 pKa = 11.84PAMEE2357 pKa = 5.12AIKK2360 pKa = 9.0TIPSSPVPPVPGSQITYY2377 pKa = 10.47QITLTNTGNVTLGDD2391 pKa = 3.9PVLTDD2396 pKa = 3.08TVRR2399 pKa = 11.84RR2400 pKa = 11.84INTDD2404 pKa = 2.94ALAGEE2409 pKa = 4.37PAVALTGGDD2418 pKa = 3.2TGTPGLFEE2426 pKa = 4.23VGEE2429 pKa = 4.16VRR2431 pKa = 11.84TYY2433 pKa = 10.99AVSYY2437 pKa = 9.64TLTQDD2442 pKa = 5.01DD2443 pKa = 3.79IDD2445 pKa = 5.23AGGVANSVTATADD2458 pKa = 3.52DD2459 pKa = 4.26PLGNPVTEE2467 pKa = 4.32VSDD2470 pKa = 3.63NGAGDD2475 pKa = 4.03GDD2477 pKa = 4.56DD2478 pKa = 3.43PTLFVIAPTPALEE2491 pKa = 4.23VIKK2494 pKa = 10.81VISQPASAVGEE2505 pKa = 4.2TVVFEE2510 pKa = 3.96ITATNTGNVTLLDD2523 pKa = 3.83AALTDD2528 pKa = 3.37SFTRR2532 pKa = 11.84LDD2534 pKa = 3.72GTPIPATPP2542 pKa = 3.65

Molecular weight:
259.59 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A0Q3ESF3|A0A0Q3ESF3_9RHOB Histidinol-phosphate aminotransferase OS=Loktanella sp. 3ANDIMAR09 OX=1225657 GN=AN189_14785 PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 9.61RR3 pKa = 11.84TFQPSNRR10 pKa = 11.84VRR12 pKa = 11.84KK13 pKa = 8.99NRR15 pKa = 11.84HH16 pKa = 3.77GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.35AGRR28 pKa = 11.84NIINARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.31GRR39 pKa = 11.84SKK41 pKa = 11.12LSAA44 pKa = 3.74

Molecular weight:
5.1 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3527

0

3527

1058224

32

2634

300.0

32.45

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.687 ± 0.064

0.881 ± 0.012

6.887 ± 0.047

4.895 ± 0.041

3.639 ± 0.028

8.679 ± 0.052

1.989 ± 0.024

5.262 ± 0.031

2.798 ± 0.035

9.722 ± 0.048

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.845 ± 0.024

2.636 ± 0.025

5.057 ± 0.031

3.434 ± 0.024

6.688 ± 0.044

4.87 ± 0.029

6.062 ± 0.043

7.421 ± 0.037

1.366 ± 0.02

2.182 ± 0.02

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski