Cladosporium fulvum T-1 virus

Taxonomy: Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Metaviridae; Metavirus

Average proteome isoelectric point is 7.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|V9H131|V9H131_9VIRU Env homologue OS=Cladosporium fulvum T-1 virus OX=2052899 PE=4 SV=1
MM1 pKa = 8.17LSMPWLLIQATNPQGWQPEE20 pKa = 4.32FFYY23 pKa = 11.28GDD25 pKa = 3.1RR26 pKa = 11.84VKK28 pKa = 11.0FDD30 pKa = 3.21TWVSQMDD37 pKa = 3.85MYY39 pKa = 11.44FLFNSMTEE47 pKa = 3.81NLKK50 pKa = 10.66PIFATTFLRR59 pKa = 11.84GRR61 pKa = 11.84AQHH64 pKa = 5.21WVKK67 pKa = 10.62PFLRR71 pKa = 11.84KK72 pKa = 9.97YY73 pKa = 10.45LDD75 pKa = 3.84SNGEE79 pKa = 4.06DD80 pKa = 3.39NADD83 pKa = 3.38GVFKK87 pKa = 10.79SYY89 pKa = 10.88NHH91 pKa = 6.87LKK93 pKa = 10.41HH94 pKa = 6.36AMKK97 pKa = 10.57SVFGVSNEE105 pKa = 3.25IATAVRR111 pKa = 11.84VIQHH115 pKa = 6.34LTQKK119 pKa = 9.77TSTAEE124 pKa = 3.83YY125 pKa = 9.06AAKK128 pKa = 9.61FQEE131 pKa = 4.32YY132 pKa = 10.39AQLTDD137 pKa = 3.33WDD139 pKa = 4.52DD140 pKa = 3.43EE141 pKa = 4.44ALQVMYY147 pKa = 10.66RR148 pKa = 11.84RR149 pKa = 11.84GLKK152 pKa = 9.77EE153 pKa = 3.81HH154 pKa = 6.65VKK156 pKa = 10.86DD157 pKa = 3.4EE158 pKa = 4.1LMRR161 pKa = 11.84DD162 pKa = 3.26GRR164 pKa = 11.84KK165 pKa = 8.96IDD167 pKa = 3.52GLGDD171 pKa = 4.0LVQVTIDD178 pKa = 4.76LDD180 pKa = 3.91DD181 pKa = 4.05KK182 pKa = 11.13LYY184 pKa = 10.42EE185 pKa = 3.95RR186 pKa = 11.84AMEE189 pKa = 3.78RR190 pKa = 11.84RR191 pKa = 11.84YY192 pKa = 10.53DD193 pKa = 3.71SKK195 pKa = 11.56VSGKK199 pKa = 10.29AGYY202 pKa = 7.78TPGYY206 pKa = 9.91DD207 pKa = 3.09NRR209 pKa = 11.84NRR211 pKa = 11.84GFNDD215 pKa = 3.18NYY217 pKa = 10.99NKK219 pKa = 10.5PKK221 pKa = 10.45DD222 pKa = 3.6KK223 pKa = 10.2PYY225 pKa = 10.73YY226 pKa = 9.87GPQPMEE232 pKa = 4.14LDD234 pKa = 3.55VTEE237 pKa = 4.57KK238 pKa = 10.54GRR240 pKa = 11.84KK241 pKa = 7.98IRR243 pKa = 11.84NSKK246 pKa = 9.7GNRR249 pKa = 11.84RR250 pKa = 11.84PPSSRR255 pKa = 11.84EE256 pKa = 3.33TRR258 pKa = 11.84TCYY261 pKa = 10.61GCGKK265 pKa = 8.5PGHH268 pKa = 6.71IARR271 pKa = 11.84DD272 pKa = 3.75CRR274 pKa = 11.84GKK276 pKa = 10.62NMVRR280 pKa = 11.84RR281 pKa = 11.84EE282 pKa = 4.3QFNMMQRR289 pKa = 11.84RR290 pKa = 11.84TSKK293 pKa = 10.58SEE295 pKa = 3.86SSVEE299 pKa = 3.92SLGDD303 pKa = 2.86IDD305 pKa = 3.46YY306 pKa = 9.14TRR308 pKa = 11.84RR309 pKa = 11.84VEE311 pKa = 4.03EE312 pKa = 4.03RR313 pKa = 11.84ASNGSTEE320 pKa = 4.1PLLDD324 pKa = 3.99PSQGRR329 pKa = 11.84GGCHH333 pKa = 5.17GQQMVVIPFEE343 pKa = 4.28LQNQPRR349 pKa = 11.84QFNMMARR356 pKa = 11.84RR357 pKa = 11.84VDD359 pKa = 3.66YY360 pKa = 10.52EE361 pKa = 3.9IEE363 pKa = 4.08SEE365 pKa = 4.12SRR367 pKa = 11.84NGHH370 pKa = 6.25GSLHH374 pKa = 6.0WRR376 pKa = 11.84FCYY379 pKa = 9.85QDD381 pKa = 3.16SCQVHH386 pKa = 5.67YY387 pKa = 10.16SAKK390 pKa = 10.24SGAGYY395 pKa = 9.43WPQQPRR401 pKa = 11.84GTLGATHH408 pKa = 6.71RR409 pKa = 11.84QDD411 pKa = 3.04ATLQEE416 pKa = 3.85VDD418 pKa = 3.43IDD420 pKa = 4.13EE421 pKa = 5.01SCFDD425 pKa = 4.93DD426 pKa = 5.8DD427 pKa = 6.69GSDD430 pKa = 5.45KK431 pKa = 11.14EE432 pKa = 4.35NQDD435 pKa = 3.84PGWNGSWSPEE445 pKa = 3.88PQEE448 pKa = 4.48EE449 pKa = 4.43SQEE452 pKa = 4.3TTGLDD457 pKa = 3.74TIEE460 pKa = 4.58EE461 pKa = 4.27DD462 pKa = 3.5QDD464 pKa = 3.76PEE466 pKa = 4.12EE467 pKa = 4.65SSEE470 pKa = 3.97EE471 pKa = 3.92DD472 pKa = 3.12SSEE475 pKa = 4.22GEE477 pKa = 4.34EE478 pKa = 5.53SDD480 pKa = 3.96TDD482 pKa = 4.04DD483 pKa = 6.21DD484 pKa = 4.36NEE486 pKa = 4.23QMTFTVDD493 pKa = 3.36APKK496 pKa = 10.59KK497 pKa = 8.77LYY499 pKa = 11.2DD500 pKa = 4.13MIIHH504 pKa = 6.22LQRR507 pKa = 11.84RR508 pKa = 11.84HH509 pKa = 5.74EE510 pKa = 4.19EE511 pKa = 3.62FLPRR515 pKa = 11.84IGGRR519 pKa = 11.84RR520 pKa = 11.84MLHH523 pKa = 6.16SIEE526 pKa = 4.04FDD528 pKa = 3.1KK529 pKa = 11.43TLDD532 pKa = 3.66TLRR535 pKa = 11.84GMAWGYY541 pKa = 9.9PLMEE545 pKa = 4.29TTEE548 pKa = 4.16NLATAVTEE556 pKa = 4.07RR557 pKa = 11.84PPIGSRR563 pKa = 11.84MIGTGYY569 pKa = 8.29LTPSGTFVSNEE580 pKa = 3.65LRR582 pKa = 11.84NMVQHH587 pKa = 6.69ARR589 pKa = 11.84ALYY592 pKa = 10.68SEE594 pKa = 4.29TQKK597 pKa = 9.91IQEE600 pKa = 4.04RR601 pKa = 11.84HH602 pKa = 4.92RR603 pKa = 11.84VQMWTQKK610 pKa = 10.38GSRR613 pKa = 11.84QVQAEE618 pKa = 4.13ASRR621 pKa = 11.84HH622 pKa = 4.06EE623 pKa = 4.4ARR625 pKa = 11.84RR626 pKa = 11.84STYY629 pKa = 9.34EE630 pKa = 3.56QGKK633 pKa = 10.29GSTPQEE639 pKa = 3.88

Molecular weight: 73.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|V9H1L3|V9H1L3_9VIRU Reverse transcriptase (Fragment) OS=Cladosporium fulvum T-1 virus OX=2052899 PE=4 SV=1
MM1 pKa = 7.87APLLKK6 pKa = 10.72EE7 pKa = 3.74GDD9 pKa = 3.63KK10 pKa = 11.25VYY12 pKa = 11.28LLTKK16 pKa = 9.71NLKK19 pKa = 7.89TRR21 pKa = 11.84RR22 pKa = 11.84QTKK25 pKa = 10.16KK26 pKa = 9.92LDD28 pKa = 3.57HH29 pKa = 6.52VKK31 pKa = 10.55VGPFFIDD38 pKa = 3.4KK39 pKa = 10.7VVGPVNYY46 pKa = 10.12RR47 pKa = 11.84LRR49 pKa = 11.84LPPDD53 pKa = 3.52AKK55 pKa = 9.92IHH57 pKa = 5.45PVFHH61 pKa = 6.85ISKK64 pKa = 10.34LEE66 pKa = 4.02PADD69 pKa = 4.78AEE71 pKa = 4.87TPCQEE76 pKa = 4.23SFHH79 pKa = 6.66FEE81 pKa = 3.82PEE83 pKa = 3.89AEE85 pKa = 4.16NEE87 pKa = 4.18FEE89 pKa = 4.64VEE91 pKa = 4.73KK92 pKa = 10.95ILDD95 pKa = 3.83KK96 pKa = 10.96KK97 pKa = 8.32GQRR100 pKa = 11.84YY101 pKa = 7.78LVKK104 pKa = 9.91WKK106 pKa = 10.71GYY108 pKa = 10.27DD109 pKa = 3.23EE110 pKa = 5.74SEE112 pKa = 4.41NTWEE116 pKa = 4.61PRR118 pKa = 11.84INLANCYY125 pKa = 9.51QLLRR129 pKa = 11.84QFQKK133 pKa = 9.63WRR135 pKa = 11.84QDD137 pKa = 2.98SRR139 pKa = 11.84KK140 pKa = 9.57QEE142 pKa = 3.92AQEE145 pKa = 4.02RR146 pKa = 11.84RR147 pKa = 11.84ASPDD151 pKa = 3.04QTRR154 pKa = 11.84SRR156 pKa = 11.84PKK158 pKa = 9.87YY159 pKa = 7.73PHH161 pKa = 6.91ARR163 pKa = 11.84TKK165 pKa = 10.83

Molecular weight: 19.63 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

1849

165

1045

616.3

71.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.516 ± 0.452

1.19 ± 0.05

6.22 ± 0.583

7.734 ± 0.567

3.245 ± 0.228

5.895 ± 0.955

3.029 ± 0.2

4.543 ± 0.937

6.869 ± 1.166

7.247 ± 0.666

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.596 ± 0.633

3.678 ± 0.21

5.571 ± 0.565

5.192 ± 0.754

7.842 ± 0.323

6.057 ± 0.665

7.68 ± 1.252

4.489 ± 0.2

1.731 ± 0.018

3.678 ± 0.125
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski