Colletotrichum fioriniae PJ7

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum acutatum species complex; Colletotrichum fioriniae

Average proteome isoelectric point is 6.39

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 13759 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A010RL95|A0A010RL95_9PEZI U6 snRNA-associated Sm-like protein LSm3 OS=Colletotrichum fioriniae PJ7 OX=1445577 GN=LSM3 PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 10.3LDD4 pKa = 4.17AEE6 pKa = 4.83LFYY9 pKa = 11.16QEE11 pKa = 4.04NWADD15 pKa = 3.49STYY18 pKa = 11.01TLSNWGDD25 pKa = 3.38STIWEE30 pKa = 4.4WGTKK34 pKa = 9.38AVANVANLSTDD45 pKa = 2.67WSNLTDD51 pKa = 4.55GLAEE55 pKa = 4.35DD56 pKa = 4.89TPHH59 pKa = 7.58GDD61 pKa = 3.05ACADD65 pKa = 3.67NIARR69 pKa = 11.84DD70 pKa = 4.01DD71 pKa = 3.9NGVCVTGDD79 pKa = 3.37ASTDD83 pKa = 2.72ICAGFDD89 pKa = 3.48TFSVHH94 pKa = 6.97SLDD97 pKa = 3.97RR98 pKa = 11.84VSTEE102 pKa = 4.83DD103 pKa = 3.27IADD106 pKa = 3.41VGNFILVNSSTEE118 pKa = 3.94DD119 pKa = 3.26LSAEE123 pKa = 4.17NGGSVTPCHH132 pKa = 6.37

Molecular weight: 14.13 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A010RBN8|A0A010RBN8_9PEZI Protein kinase OS=Colletotrichum fioriniae PJ7 OX=1445577 GN=CFIO01_10155 PE=4 SV=1
MM1 pKa = 7.51KK2 pKa = 9.82PLRR5 pKa = 11.84LTTSRR10 pKa = 11.84PVSPTTVVRR19 pKa = 11.84RR20 pKa = 11.84PRR22 pKa = 11.84RR23 pKa = 11.84LRR25 pKa = 11.84PPSVRR30 pKa = 11.84SLPSTRR36 pKa = 11.84LSRR39 pKa = 11.84LVTLRR44 pKa = 11.84LVSPTTAARR53 pKa = 11.84RR54 pKa = 11.84PRR56 pKa = 11.84RR57 pKa = 11.84PRR59 pKa = 11.84PPSVRR64 pKa = 11.84SLLSMRR70 pKa = 11.84PSRR73 pKa = 11.84PATLSLASLTTAARR87 pKa = 11.84RR88 pKa = 11.84PRR90 pKa = 11.84RR91 pKa = 11.84PRR93 pKa = 11.84PPSATNPPSTRR104 pKa = 11.84PSRR107 pKa = 11.84LVTSKK112 pKa = 10.16PASPTTAARR121 pKa = 11.84RR122 pKa = 11.84RR123 pKa = 11.84RR124 pKa = 11.84RR125 pKa = 11.84PRR127 pKa = 11.84LPSVTNSSPRR137 pKa = 11.84RR138 pKa = 11.84PSSLLSTRR146 pKa = 11.84SRR148 pKa = 11.84PVSPTTAARR157 pKa = 11.84RR158 pKa = 11.84PRR160 pKa = 11.84RR161 pKa = 11.84RR162 pKa = 11.84RR163 pKa = 11.84PPSAMSPPPTTPSSPPSTRR182 pKa = 11.84SRR184 pKa = 11.84PASLTTVARR193 pKa = 11.84RR194 pKa = 11.84PRR196 pKa = 11.84RR197 pKa = 11.84QRR199 pKa = 11.84LLSARR204 pKa = 11.84SPPPTTPLSTPSRR217 pKa = 11.84PASPTTVXXXRR228 pKa = 11.84RR229 pKa = 11.84PRR231 pKa = 11.84PRR233 pKa = 11.84SATSSLPRR241 pKa = 11.84TLPSTPLRR249 pKa = 11.84LVSPTTAARR258 pKa = 11.84RR259 pKa = 11.84PRR261 pKa = 11.84RR262 pKa = 11.84PRR264 pKa = 11.84PRR266 pKa = 11.84SATSTPPLRR275 pKa = 11.84LALSPLKK282 pKa = 10.79GVVQLCGRR290 pKa = 11.84HH291 pKa = 6.26GGQQLNALTRR301 pKa = 11.84ATLEE305 pKa = 3.79LRR307 pKa = 11.84RR308 pKa = 11.84PPVLPCII315 pKa = 4.39

Molecular weight: 34.31 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

13759

0

13759

6816730

24

9111

495.4

54.6

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.073 ± 0.019

1.217 ± 0.007

5.714 ± 0.014

6.03 ± 0.023

3.79 ± 0.012

7.152 ± 0.02

2.312 ± 0.011

4.795 ± 0.014

4.804 ± 0.017

8.678 ± 0.022

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.21 ± 0.008

3.672 ± 0.01

6.102 ± 0.026

3.889 ± 0.014

5.864 ± 0.02

8.067 ± 0.025

6.11 ± 0.025

6.255 ± 0.018

1.538 ± 0.008

2.725 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski