Bos taurus papillomavirus 8

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Epsilonpapillomavirus; Epsilonpapillomavirus 1

Average proteome isoelectric point is 6.72

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A6XA98|A6XA98_BPV5 Major capsid protein L1 OS=Bos taurus papillomavirus 8 OX=2758968 GN=L1 PE=3 SV=1
MM1 pKa = 7.47AVRR4 pKa = 11.84VRR6 pKa = 11.84RR7 pKa = 11.84VKK9 pKa = 10.41RR10 pKa = 11.84ANPYY14 pKa = 10.57DD15 pKa = 4.17LYY17 pKa = 9.98RR18 pKa = 11.84TCATGDD24 pKa = 3.64CPQDD28 pKa = 3.34VKK30 pKa = 11.59DD31 pKa = 3.92KK32 pKa = 11.21FEE34 pKa = 5.49HH35 pKa = 5.53NTLADD40 pKa = 5.16KK41 pKa = 10.46ILKK44 pKa = 8.89WGSTGIFLGGLGIGTGQGRR63 pKa = 11.84PGLGTYY69 pKa = 10.32SPLGRR74 pKa = 11.84GGGGGVSGRR83 pKa = 11.84IPTRR87 pKa = 11.84PSGSRR92 pKa = 11.84PLGRR96 pKa = 11.84PFNSGPIDD104 pKa = 3.66TIGAGGLRR112 pKa = 11.84PSVEE116 pKa = 4.13SSVNSADD123 pKa = 3.89VVALLPDD130 pKa = 3.87SPSVVTPDD138 pKa = 4.25SMPVDD143 pKa = 4.08PGVGGLDD150 pKa = 2.89IHH152 pKa = 8.29AEE154 pKa = 4.23VVEE157 pKa = 4.48EE158 pKa = 3.9PSLIFVEE165 pKa = 4.68PHH167 pKa = 4.84ATEE170 pKa = 4.44DD171 pKa = 4.2VAVLDD176 pKa = 4.33MNPAEE181 pKa = 4.84HH182 pKa = 6.91DD183 pKa = 3.54QSVHH187 pKa = 5.76LSSSTTHH194 pKa = 6.5HH195 pKa = 6.09NPSFQGHH202 pKa = 4.34VTLYY206 pKa = 9.87TDD208 pKa = 2.87IGEE211 pKa = 4.33TSEE214 pKa = 5.79VEE216 pKa = 4.11NLWIGGTSIGSNRR229 pKa = 11.84GEE231 pKa = 4.35EE232 pKa = 3.77IQMQLFSTPRR242 pKa = 11.84SSTPEE247 pKa = 3.5TEE249 pKa = 4.28AIGRR253 pKa = 11.84VRR255 pKa = 11.84GRR257 pKa = 11.84ANWFSRR263 pKa = 11.84RR264 pKa = 11.84YY265 pKa = 6.48YY266 pKa = 8.3TQVSVRR272 pKa = 11.84DD273 pKa = 3.97PKK275 pKa = 10.89FLEE278 pKa = 3.87QPRR281 pKa = 11.84EE282 pKa = 3.74YY283 pKa = 9.8FTYY286 pKa = 10.28GFEE289 pKa = 4.25NPAYY293 pKa = 9.83EE294 pKa = 4.71PDD296 pKa = 3.84PLEE299 pKa = 4.92DD300 pKa = 3.58SFDD303 pKa = 3.69VSEE306 pKa = 4.4VSPSVRR312 pKa = 11.84VEE314 pKa = 3.68PEE316 pKa = 3.63FRR318 pKa = 11.84DD319 pKa = 3.78LTHH322 pKa = 5.21VTAAKK327 pKa = 9.47TLTGNTGRR335 pKa = 11.84LGVSRR340 pKa = 11.84VGTKK344 pKa = 10.57LSIGTRR350 pKa = 11.84SGVRR354 pKa = 11.84IGGQVHH360 pKa = 5.95FRR362 pKa = 11.84YY363 pKa = 10.12SLSTIADD370 pKa = 3.69EE371 pKa = 5.18EE372 pKa = 4.39GLEE375 pKa = 3.95LLPRR379 pKa = 11.84SAAEE383 pKa = 4.26GSAGPLQHH391 pKa = 6.8SAEE394 pKa = 4.31TVLTDD399 pKa = 3.06GHH401 pKa = 6.29DD402 pKa = 3.5AYY404 pKa = 11.7VEE406 pKa = 3.98VDD408 pKa = 3.42HH409 pKa = 7.01NSTGSAYY416 pKa = 10.78SEE418 pKa = 3.86IDD420 pKa = 3.66LLDD423 pKa = 3.99EE424 pKa = 5.91DD425 pKa = 4.92EE426 pKa = 4.47VTPHH430 pKa = 5.98GVLVFHH436 pKa = 7.25DD437 pKa = 5.01RR438 pKa = 11.84PAEE441 pKa = 3.93TDD443 pKa = 3.62VVPITDD449 pKa = 2.96VSYY452 pKa = 10.96AIKK455 pKa = 10.02PLSTIPGDD463 pKa = 3.95DD464 pKa = 4.69LLPSSTITMQNGPVHH479 pKa = 7.24VDD481 pKa = 3.19GQDD484 pKa = 3.33NIVPDD489 pKa = 4.42IIIIDD494 pKa = 3.99FSVEE498 pKa = 3.28GTYY501 pKa = 10.68FLNTYY506 pKa = 8.86AHH508 pKa = 7.08PSLHH512 pKa = 5.76KK513 pKa = 9.88RR514 pKa = 11.84KK515 pKa = 9.67KK516 pKa = 9.9RR517 pKa = 11.84RR518 pKa = 11.84LSS520 pKa = 3.29

Molecular weight: 56.13 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A6XA92|A6XA92_BPV5 E7 OS=Bos taurus papillomavirus 8 OX=2758968 PE=4 SV=1
MM1 pKa = 7.72PCFIPSYY8 pKa = 10.83NFDD11 pKa = 3.81GLDD14 pKa = 3.52CLVCKK19 pKa = 10.46RR20 pKa = 11.84PLGSYY25 pKa = 10.13DD26 pKa = 3.55ALKK29 pKa = 10.94CKK31 pKa = 8.39TNKK34 pKa = 9.05FRR36 pKa = 11.84RR37 pKa = 11.84VHH39 pKa = 6.68RR40 pKa = 11.84DD41 pKa = 2.6GHH43 pKa = 6.24VYY45 pKa = 10.71GMCCGCTEE53 pKa = 4.65LLLKK57 pKa = 10.13IEE59 pKa = 4.84RR60 pKa = 11.84EE61 pKa = 4.17DD62 pKa = 3.93NPWSLVCPHH71 pKa = 7.07DD72 pKa = 3.84FKK74 pKa = 11.41KK75 pKa = 11.1VFGRR79 pKa = 11.84QVGDD83 pKa = 3.95CIVRR87 pKa = 11.84CYY89 pKa = 11.22YY90 pKa = 10.29CGCPLSDD97 pKa = 3.93SEE99 pKa = 4.8KK100 pKa = 10.64DD101 pKa = 3.2RR102 pKa = 11.84HH103 pKa = 5.69ALASEE108 pKa = 5.29GYY110 pKa = 10.03LFLRR114 pKa = 11.84GKK116 pKa = 9.72PRR118 pKa = 11.84GRR120 pKa = 11.84CYY122 pKa = 11.05ACASDD127 pKa = 3.77GRR129 pKa = 11.84RR130 pKa = 11.84PCLYY134 pKa = 10.67

Molecular weight: 15.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

2439

40

593

304.9

33.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.191 ± 0.588

3.034 ± 1.195

5.74 ± 0.409

5.453 ± 0.395

4.223 ± 0.417

7.749 ± 0.905

2.788 ± 0.523

3.772 ± 0.384

4.592 ± 0.685

8.979 ± 0.829

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.517 ± 0.238

3.895 ± 0.743

6.765 ± 0.943

4.059 ± 0.693

6.191 ± 0.754

7.626 ± 0.687

6.56 ± 0.558

6.56 ± 0.637

1.312 ± 0.238

2.993 ± 0.415
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski