Chimpanzee associated porprismacovirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus

Average proteome isoelectric point is 6.65

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D2WKE3|D2WKE3_9VIRU Putative replicase protein OS=Chimpanzee associated porprismacovirus 1 OX=2170109 GN=rep PE=4 SV=1
MM1 pKa = 7.01FVKK4 pKa = 10.65VSEE7 pKa = 4.49TYY9 pKa = 10.72DD10 pKa = 4.37LSTQTDD16 pKa = 2.71KK17 pKa = 11.16MGFVGIHH24 pKa = 4.75TPEE27 pKa = 4.3GKK29 pKa = 9.88LVYY32 pKa = 10.76NMWSGLFKK40 pKa = 10.78NFRR43 pKa = 11.84KK44 pKa = 9.39FRR46 pKa = 11.84YY47 pKa = 8.92ASCDD51 pKa = 3.08VTMACASMLPADD63 pKa = 4.26PLQIGVEE70 pKa = 4.09AGDD73 pKa = 4.21IAPQDD78 pKa = 3.63MFNPILYY85 pKa = 8.86KK86 pKa = 10.64ACSNDD91 pKa = 3.26SMSVLLNRR99 pKa = 11.84LYY101 pKa = 11.07AGADD105 pKa = 3.19ASTSAINKK113 pKa = 9.21NSVVAQNDD121 pKa = 3.17EE122 pKa = 4.44SFGYY126 pKa = 10.62DD127 pKa = 3.07ADD129 pKa = 4.02NDD131 pKa = 3.39VDD133 pKa = 4.06QFAMYY138 pKa = 10.28YY139 pKa = 10.82GLLADD144 pKa = 3.49SDD146 pKa = 4.19GWRR149 pKa = 11.84KK150 pKa = 10.0AMPQAGLQMHH160 pKa = 6.13GRR162 pKa = 11.84KK163 pKa = 8.97PLVFGITSNFGQPSNVGLPNGKK185 pKa = 8.15MVYY188 pKa = 9.01TGNGDD193 pKa = 3.34GSLTARR199 pKa = 11.84NTIDD203 pKa = 3.26STLFQYY209 pKa = 9.91MRR211 pKa = 11.84GPTMGMPALDD221 pKa = 3.54TFVQLGGSTVVNGFADD237 pKa = 3.74SVTVPEE243 pKa = 4.4VSDD246 pKa = 3.29RR247 pKa = 11.84AYY249 pKa = 9.87PISNGSITTPGNVCTPNLDD268 pKa = 3.78TPDD271 pKa = 3.94CFVAAIVLPPAKK283 pKa = 10.22LNRR286 pKa = 11.84LYY288 pKa = 11.4YY289 pKa = 10.02RR290 pKa = 11.84MKK292 pKa = 9.55VTWTIEE298 pKa = 4.11FSGLRR303 pKa = 11.84PDD305 pKa = 3.7TDD307 pKa = 3.35LTNWYY312 pKa = 9.43GLALAGVQSYY322 pKa = 10.98GSDD325 pKa = 3.47YY326 pKa = 10.38LTQTATIARR335 pKa = 11.84ATSTANTSGMVDD347 pKa = 3.1TGDD350 pKa = 3.35VSLTKK355 pKa = 10.74VMEE358 pKa = 4.68GASS361 pKa = 3.42

Molecular weight: 38.88 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D2WKE3|D2WKE3_9VIRU Putative replicase protein OS=Chimpanzee associated porprismacovirus 1 OX=2170109 GN=rep PE=4 SV=1
MM1 pKa = 7.3GHH3 pKa = 5.99MFGYY7 pKa = 8.5TCLKK11 pKa = 9.54RR12 pKa = 11.84GCPRR16 pKa = 11.84RR17 pKa = 11.84PLDD20 pKa = 3.25YY21 pKa = 11.08ALVYY25 pKa = 10.52GVGISGHH32 pKa = 5.9NDD34 pKa = 2.9NDD36 pKa = 3.65GTHH39 pKa = 5.19PHH41 pKa = 6.02EE42 pKa = 4.72RR43 pKa = 11.84RR44 pKa = 11.84ANPLVQNLPRR54 pKa = 11.84SRR56 pKa = 11.84YY57 pKa = 8.26SQMGYY62 pKa = 9.79RR63 pKa = 11.84AGGRR67 pKa = 11.84SRR69 pKa = 11.84RR70 pKa = 11.84VQALAGQMQCAGCEE84 pKa = 3.8RR85 pKa = 11.84PAVDD89 pKa = 3.38GLSTVRR95 pKa = 11.84IRR97 pKa = 11.84MGRR100 pKa = 11.84GYY102 pKa = 10.44LDD104 pKa = 3.16SYY106 pKa = 10.03RR107 pKa = 11.84RR108 pKa = 11.84SVRR111 pKa = 11.84ISTSTRR117 pKa = 11.84RR118 pKa = 11.84KK119 pKa = 9.34RR120 pKa = 11.84ATIGHH125 pKa = 6.55RR126 pKa = 11.84GIRR129 pKa = 11.84WAHH132 pKa = 5.33VNSEE136 pKa = 4.13FGKK139 pKa = 9.44MRR141 pKa = 11.84WNQEE145 pKa = 3.43GALEE149 pKa = 4.1ALQRR153 pKa = 11.84TNDD156 pKa = 3.41RR157 pKa = 11.84EE158 pKa = 4.08IVVWYY163 pKa = 9.81DD164 pKa = 2.92QDD166 pKa = 4.05GNMGKK171 pKa = 9.23SWLCGHH177 pKa = 7.6LYY179 pKa = 8.32EE180 pKa = 5.0TGKK183 pKa = 10.73AYY185 pKa = 10.16YY186 pKa = 8.97IPPYY190 pKa = 10.09ISTIQSMIQTVASLVLQDD208 pKa = 4.91RR209 pKa = 11.84EE210 pKa = 3.99AGYY213 pKa = 9.36PPRR216 pKa = 11.84PLIVIDD222 pKa = 5.23IPRR225 pKa = 11.84SWKK228 pKa = 9.63WSTEE232 pKa = 3.64LYY234 pKa = 9.64TAIEE238 pKa = 4.54AIKK241 pKa = 10.41DD242 pKa = 3.74GLIMDD247 pKa = 4.67PRR249 pKa = 11.84YY250 pKa = 9.71GARR253 pKa = 11.84PVNIHH258 pKa = 4.49GTKK261 pKa = 10.52VIVLTNTKK269 pKa = 9.98PKK271 pKa = 10.2LDD273 pKa = 3.97KK274 pKa = 10.88LSEE277 pKa = 4.3DD278 pKa = 2.82RR279 pKa = 11.84WVLYY283 pKa = 10.74DD284 pKa = 3.75PLLYY288 pKa = 9.93MM289 pKa = 5.73

Molecular weight: 33.04 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

650

289

361

325.0

35.96

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.385 ± 0.99

1.538 ± 0.126

6.462 ± 0.838

2.769 ± 0.683

2.615 ± 1.267

9.231 ± 0.074

1.538 ± 0.81

4.615 ± 1.063

3.692 ± 0.075

7.846 ± 0.074

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

4.154 ± 0.457

4.769 ± 0.863

5.385 ± 0.1

3.538 ± 0.176

6.769 ± 2.836

7.077 ± 0.787

7.077 ± 1.243

6.769 ± 0.584

1.692 ± 0.481

5.077 ± 0.531
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski