Coemansia reversa (strain ATCC 12441 / NRRL 1564)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Fungi incertae sedis; Zoopagomycota; Kickxellomycotina; Kickxellomycetes; Kickxellales; Kickxellaceae; Coemansia; Coemansia reversa

Average proteome isoelectric point is 6.63

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7317 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2G5BIH1|A0A2G5BIH1_COERN Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase (Fragment) OS=Coemansia reversa (strain ATCC 12441 / NRRL 1564) OX=763665 GN=COEREDRAFT_22562 PE=4 SV=1
MM1 pKa = 7.71PRR3 pKa = 11.84PSDD6 pKa = 3.56FTDD9 pKa = 3.47CQARR13 pKa = 11.84DD14 pKa = 4.14DD15 pKa = 5.77EE16 pKa = 4.52IQCWIHH22 pKa = 6.23KK23 pKa = 9.14CHH25 pKa = 5.49EE26 pKa = 4.37HH27 pKa = 6.26EE28 pKa = 6.05DD29 pKa = 3.73IVGEE33 pKa = 4.07LTLDD37 pKa = 3.51FNKK40 pKa = 9.84VVTKK44 pKa = 10.51RR45 pKa = 11.84LHH47 pKa = 6.71RR48 pKa = 11.84DD49 pKa = 3.11VLYY52 pKa = 10.84HH53 pKa = 5.83LTNGHH58 pKa = 6.17GLGEE62 pKa = 4.19AAALDD67 pKa = 3.49AMVIVDD73 pKa = 3.63SASRR77 pKa = 11.84FLQVYY82 pKa = 8.38PIVNQTTATLIEE94 pKa = 4.34TLNSGWFLKK103 pKa = 11.27YY104 pKa = 10.54EE105 pKa = 4.68DD106 pKa = 4.87DD107 pKa = 4.05TNGMGWTKK115 pKa = 9.57FVPYY119 pKa = 9.91IVTSYY124 pKa = 11.16AVTVSEE130 pKa = 4.45SSSNIPATLFFGPSAIQSDD149 pKa = 4.32EE150 pKa = 4.17AFALQPTGGEE160 pKa = 4.27MPDD163 pKa = 3.32HH164 pKa = 5.8QQLMDD169 pKa = 4.02HH170 pKa = 5.88TWEE173 pKa = 4.95PYY175 pKa = 10.12HH176 pKa = 7.27VVARR180 pKa = 11.84YY181 pKa = 9.0GPSYY185 pKa = 10.42QLEE188 pKa = 4.34FADD191 pKa = 4.16GVPFVSTVAGDD202 pKa = 4.07LLMPYY207 pKa = 9.68HH208 pKa = 7.0WGDD211 pKa = 3.64DD212 pKa = 3.47VDD214 pKa = 4.13PAEE217 pKa = 4.45VAPSSTDD224 pKa = 3.06EE225 pKa = 4.6SDD227 pKa = 3.94PSDD230 pKa = 3.18HH231 pKa = 7.13SYY233 pKa = 11.51VDD235 pKa = 3.47EE236 pKa = 4.75SMNDD240 pKa = 3.61DD241 pKa = 3.66GSSNSSNAGPSTPPPEE257 pKa = 4.25EE258 pKa = 4.66SNGSLYY264 pKa = 9.76FTGSGGLGSSAALEE278 pKa = 4.33DD279 pKa = 3.44EE280 pKa = 4.69CRR282 pKa = 11.84RR283 pKa = 11.84SPSRR287 pKa = 11.84DD288 pKa = 2.98TSLQLPPSFLSFVAGRR304 pKa = 11.84DD305 pKa = 3.48TASQSPAHH313 pKa = 6.5ISVSSTNRR321 pKa = 11.84SLIRR325 pKa = 11.84GEE327 pKa = 4.03VPDD330 pKa = 3.72IVEE333 pKa = 4.26VLSDD337 pKa = 3.59SDD339 pKa = 4.03EE340 pKa = 4.4SDD342 pKa = 4.24NYY344 pKa = 11.45DD345 pKa = 3.39SDD347 pKa = 4.04DD348 pKa = 3.91SEE350 pKa = 4.64YY351 pKa = 11.25EE352 pKa = 4.02PLSGDD357 pKa = 3.35NTSDD361 pKa = 3.37KK362 pKa = 11.38SSDD365 pKa = 3.41EE366 pKa = 4.18SDD368 pKa = 4.09GKK370 pKa = 10.71DD371 pKa = 3.08EE372 pKa = 5.8DD373 pKa = 4.51EE374 pKa = 4.49GTEE377 pKa = 4.1PPLGPLAVSSIGFSGPSSIRR397 pKa = 11.84NATTMSEE404 pKa = 4.11MEE406 pKa = 4.61TIQSTMVCDD415 pKa = 4.21ISTAPNTCDD424 pKa = 3.05VGVSTEE430 pKa = 3.8NMYY433 pKa = 8.12TTASAQTNTASDD445 pKa = 3.82MLEE448 pKa = 3.58QAQYY452 pKa = 11.76GEE454 pKa = 4.54TPTDD458 pKa = 3.22NATMVGIEE466 pKa = 4.58TIMVDD471 pKa = 4.52DD472 pKa = 5.49GDD474 pKa = 4.89SISNDD479 pKa = 3.57EE480 pKa = 3.77IRR482 pKa = 11.84IDD484 pKa = 3.37IVEE487 pKa = 4.58DD488 pKa = 3.8EE489 pKa = 4.29EE490 pKa = 5.55DD491 pKa = 3.54SGRR494 pKa = 11.84SAIVPLPQVPSPQTVTTKK512 pKa = 10.97APDD515 pKa = 3.37NHH517 pKa = 7.09IDD519 pKa = 3.59AEE521 pKa = 4.55TIPTSDD527 pKa = 3.78NSPSEE532 pKa = 3.67IWAMSTAIVPYY543 pKa = 8.33SHH545 pKa = 7.01GYY547 pKa = 8.71YY548 pKa = 10.37GYY550 pKa = 10.5SPYY553 pKa = 10.93EE554 pKa = 3.88LAVSRR559 pKa = 11.84ALINN563 pKa = 3.45

Molecular weight: 60.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2G5B6P2|A0A2G5B6P2_COERN Uncharacterized protein OS=Coemansia reversa (strain ATCC 12441 / NRRL 1564) OX=763665 GN=COEREDRAFT_82558 PE=4 SV=1
MM1 pKa = 6.53TTKK4 pKa = 10.69LPPGPRR10 pKa = 11.84MMTTKK15 pKa = 10.59LPPGPRR21 pKa = 11.84MMTTKK26 pKa = 10.59LPPGPRR32 pKa = 11.84MMTTKK37 pKa = 10.59LPPGPRR43 pKa = 11.84MATTRR48 pKa = 11.84LPPGLRR54 pKa = 11.84MVTTKK59 pKa = 10.76LPPGRR64 pKa = 11.84MTVAMPVPPGPRR76 pKa = 11.84MMTTKK81 pKa = 10.76LPPP84 pKa = 4.06

Molecular weight: 9.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7317

0

7317

2997087

49

5170

409.6

45.37

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.114 ± 0.043

1.461 ± 0.013

5.695 ± 0.022

5.879 ± 0.026

3.525 ± 0.018

6.286 ± 0.023

2.524 ± 0.014

5.13 ± 0.025

4.502 ± 0.026

9.115 ± 0.03

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.492 ± 0.012

3.988 ± 0.022

5.001 ± 0.028

4.279 ± 0.023

6.272 ± 0.03

8.233 ± 0.032

5.816 ± 0.019

6.62 ± 0.023

1.17 ± 0.01

2.899 ± 0.017
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski