Heterobasidion partitivirus 8

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Partitiviridae; Betapartitivirus

Average proteome isoelectric point is 5.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|K7U6Q4|K7U6Q4_9VIRU Capsid protein OS=Heterobasidion partitivirus 8 OX=1249677 PE=4 SV=1
MM1 pKa = 7.6ASSATRR7 pKa = 11.84IQTASRR13 pKa = 11.84VSPVEE18 pKa = 3.43IRR20 pKa = 11.84TPPALAAIAKK30 pKa = 9.41KK31 pKa = 9.64FAPVVLQDD39 pKa = 4.88DD40 pKa = 4.44DD41 pKa = 4.61TPVPPSNADD50 pKa = 2.98YY51 pKa = 10.32FGRR54 pKa = 11.84MNLPTNVEE62 pKa = 4.1LDD64 pKa = 3.04SGNYY68 pKa = 9.78HH69 pKa = 6.72NIDD72 pKa = 3.33VQFDD76 pKa = 3.36TRR78 pKa = 11.84FILNYY83 pKa = 10.02IMYY86 pKa = 9.24HH87 pKa = 4.51VTALAPEE94 pKa = 4.72LNFKK98 pKa = 9.16GHH100 pKa = 7.38PYY102 pKa = 10.3FSPLSYY108 pKa = 9.8IGYY111 pKa = 9.38CLHH114 pKa = 7.17LLYY117 pKa = 11.04ALMLACDD124 pKa = 3.41VTFRR128 pKa = 11.84SDD130 pKa = 3.79KK131 pKa = 9.68SWHH134 pKa = 6.24AARR137 pKa = 11.84FMTDD141 pKa = 2.93QEE143 pKa = 4.42RR144 pKa = 11.84KK145 pKa = 9.99DD146 pKa = 3.61LYY148 pKa = 10.82EE149 pKa = 4.03VLLNCHH155 pKa = 6.19MPTFLSDD162 pKa = 4.29LFLEE166 pKa = 4.76LSPVYY171 pKa = 10.33DD172 pKa = 3.59PRR174 pKa = 11.84RR175 pKa = 11.84NNLLFVPSLAGFSFEE190 pKa = 4.7HH191 pKa = 6.97DD192 pKa = 4.04FGRR195 pKa = 11.84TIPPSLFYY203 pKa = 10.53AAHH206 pKa = 6.59HH207 pKa = 6.01MLASTRR213 pKa = 11.84TNKK216 pKa = 10.37DD217 pKa = 3.26PNDD220 pKa = 3.98VIDD223 pKa = 5.15DD224 pKa = 4.02CMSLNVITAGATTYY238 pKa = 10.58KK239 pKa = 10.42VSNFLGTWYY248 pKa = 10.63ASGHH252 pKa = 5.92HH253 pKa = 6.98DD254 pKa = 2.79NWLNRR259 pKa = 11.84DD260 pKa = 3.55FLAFFNPLVGRR271 pKa = 11.84FLTQRR276 pKa = 11.84PTFARR281 pKa = 11.84IHH283 pKa = 6.57TDD285 pKa = 3.08TEE287 pKa = 4.02TLAIDD292 pKa = 3.92GTGNPYY298 pKa = 8.8TAYY301 pKa = 11.09LLASDD306 pKa = 4.73EE307 pKa = 4.42NTSVMTTLLTAMSTFILANDD327 pKa = 4.05PKK329 pKa = 10.63APKK332 pKa = 9.79LGSVLATLSGTLLLSYY348 pKa = 10.33SIEE351 pKa = 4.41PPTLPTWTAATYY363 pKa = 7.69TQEE366 pKa = 3.98TDD368 pKa = 3.24PADD371 pKa = 3.65VNDD374 pKa = 3.46ATFARR379 pKa = 11.84EE380 pKa = 4.1HH381 pKa = 6.42NFLADD386 pKa = 3.58EE387 pKa = 4.2PVYY390 pKa = 10.8TNDD393 pKa = 4.61GEE395 pKa = 4.6YY396 pKa = 10.23PDD398 pKa = 5.15DD399 pKa = 3.75TTNGNMQLYY408 pKa = 9.22HH409 pKa = 6.56FAHH412 pKa = 7.38GAPAHH417 pKa = 5.33TAARR421 pKa = 11.84TPYY424 pKa = 10.21KK425 pKa = 10.43HH426 pKa = 6.54IVFNARR432 pKa = 11.84YY433 pKa = 8.45HH434 pKa = 5.16LTPYY438 pKa = 10.77VMYY441 pKa = 8.66FQPYY445 pKa = 8.83DD446 pKa = 3.64VSPSSLGLTIAAGIKK461 pKa = 9.46IEE463 pKa = 4.62HH464 pKa = 6.84GDD466 pKa = 3.27IAGFAVNIEE475 pKa = 4.18QPEE478 pKa = 4.23SSLDD482 pKa = 3.7DD483 pKa = 3.68NNAQILQSAIRR494 pKa = 11.84LNKK497 pKa = 9.77IIRR500 pKa = 11.84VNANTTAGNNASRR513 pKa = 11.84VVQRR517 pKa = 11.84DD518 pKa = 3.04HH519 pKa = 7.9LDD521 pKa = 3.32RR522 pKa = 11.84TKK524 pKa = 10.85QGIMTIFRR532 pKa = 11.84SIAKK536 pKa = 9.96SVFPYY541 pKa = 10.73LDD543 pKa = 3.35GSAIHH548 pKa = 5.65YY549 pKa = 7.7TPATLPRR556 pKa = 11.84NLGLTEE562 pKa = 4.04EE563 pKa = 4.48AGHH566 pKa = 6.55YY567 pKa = 10.34SLQQGFNVKK576 pKa = 10.28AGTEE580 pKa = 4.36GKK582 pKa = 8.46FTAPDD587 pKa = 3.23HH588 pKa = 7.26SIYY591 pKa = 10.55LWSSYY596 pKa = 10.72RR597 pKa = 11.84YY598 pKa = 8.02VHH600 pKa = 6.49KK601 pKa = 10.6KK602 pKa = 10.09KK603 pKa = 10.65NPAPADD609 pKa = 3.15ISMLATLRR617 pKa = 11.84TFYY620 pKa = 10.97GSNVTLSRR628 pKa = 11.84SKK630 pKa = 11.16NPVLMIPHH638 pKa = 7.3

Molecular weight: 71.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|K7U6Q4|K7U6Q4_9VIRU Capsid protein OS=Heterobasidion partitivirus 8 OX=1249677 PE=4 SV=1
MM1 pKa = 7.39LSKK4 pKa = 10.76VRR6 pKa = 11.84DD7 pKa = 3.98FFHH10 pKa = 7.12EE11 pKa = 4.08KK12 pKa = 10.4LSRR15 pKa = 11.84LLLQHH20 pKa = 7.19SIFQSNDD27 pKa = 2.54KK28 pKa = 11.21DD29 pKa = 3.79EE30 pKa = 4.45EE31 pKa = 4.22QTLLEE36 pKa = 4.36NQSSDD41 pKa = 2.88VKK43 pKa = 10.59RR44 pKa = 11.84IYY46 pKa = 11.07NSIHH50 pKa = 6.42YY51 pKa = 9.74SFQTDD56 pKa = 3.48DD57 pKa = 3.26TQAAYY62 pKa = 10.03EE63 pKa = 4.37DD64 pKa = 4.24QYY66 pKa = 11.56QHH68 pKa = 6.37IKK70 pKa = 10.44HH71 pKa = 5.68VLEE74 pKa = 5.12DD75 pKa = 3.85KK76 pKa = 10.95DD77 pKa = 3.76RR78 pKa = 11.84LSNFPAEE85 pKa = 4.76FYY87 pKa = 10.96LPYY90 pKa = 10.06DD91 pKa = 3.62TTTTPDD97 pKa = 3.0NRR99 pKa = 11.84VPPSGIDD106 pKa = 3.24QLPYY110 pKa = 9.75VYY112 pKa = 10.66KK113 pKa = 9.56RR114 pKa = 11.84TNVVTATDD122 pKa = 3.91EE123 pKa = 4.35VPEE126 pKa = 4.06TGYY129 pKa = 9.95PIQNRR134 pKa = 11.84LLRR137 pKa = 11.84LIRR140 pKa = 11.84SRR142 pKa = 11.84YY143 pKa = 7.28PQYY146 pKa = 10.62LPHH149 pKa = 6.38VRR151 pKa = 11.84TFTRR155 pKa = 11.84PLGTTDD161 pKa = 2.98ATVSDD166 pKa = 4.67FFKK169 pKa = 10.07PQHH172 pKa = 6.49PSRR175 pKa = 11.84LVDD178 pKa = 3.71PSRR181 pKa = 11.84ISHH184 pKa = 5.13VMKK187 pKa = 10.62HH188 pKa = 5.76VMNKK192 pKa = 8.36MAITPYY198 pKa = 10.69LPIHH202 pKa = 6.26FVDD205 pKa = 3.47TQYY208 pKa = 11.77DD209 pKa = 3.79KK210 pKa = 11.46RR211 pKa = 11.84PLSTGTGYY219 pKa = 10.91YY220 pKa = 10.02NRR222 pKa = 11.84RR223 pKa = 11.84SHH225 pKa = 6.34EE226 pKa = 4.28ANIHH230 pKa = 5.7ALYY233 pKa = 10.35SHH235 pKa = 7.03PKK237 pKa = 8.41EE238 pKa = 4.3YY239 pKa = 10.69EE240 pKa = 3.71NKK242 pKa = 8.33RR243 pKa = 11.84TSKK246 pKa = 10.61GYY248 pKa = 10.13YY249 pKa = 8.92INAFLEE255 pKa = 4.47SARR258 pKa = 11.84SLVHH262 pKa = 6.62WIKK265 pKa = 11.0SYY267 pKa = 11.51GNPFRR272 pKa = 11.84SKK274 pKa = 10.12PADD277 pKa = 3.33PRR279 pKa = 11.84EE280 pKa = 4.08SLKK283 pKa = 10.94KK284 pKa = 10.52FFLQRR289 pKa = 11.84PTMLFTRR296 pKa = 11.84NHH298 pKa = 5.57ISKK301 pKa = 10.34ILGALKK307 pKa = 9.86QRR309 pKa = 11.84PVYY312 pKa = 10.64AVDD315 pKa = 5.16DD316 pKa = 4.18LFLTLEE322 pKa = 4.22SMVTFPAHH330 pKa = 5.7TIARR334 pKa = 11.84KK335 pKa = 9.53IEE337 pKa = 3.89CCIMYY342 pKa = 9.9GYY344 pKa = 8.32EE345 pKa = 4.2TIRR348 pKa = 11.84GSNVQLDD355 pKa = 4.04RR356 pKa = 11.84LAQRR360 pKa = 11.84YY361 pKa = 8.96NSFFTIDD368 pKa = 2.88WSGFDD373 pKa = 4.51QRR375 pKa = 11.84LPWVIVLLFFTEE387 pKa = 4.43FLPRR391 pKa = 11.84LLVINHH397 pKa = 6.91GYY399 pKa = 10.56APTYY403 pKa = 9.87DD404 pKa = 3.63FPSYY408 pKa = 10.67PDD410 pKa = 3.43LTTEE414 pKa = 3.76MMYY417 pKa = 10.55QRR419 pKa = 11.84LSNILSFLATWYY431 pKa = 10.65FNMVFITADD440 pKa = 2.7GFAYY444 pKa = 9.87VRR446 pKa = 11.84RR447 pKa = 11.84FAGVPSGLLNTQFLDD462 pKa = 3.52SFGNLFLIIDD472 pKa = 3.84ALIEE476 pKa = 4.05FGAQDD481 pKa = 3.8EE482 pKa = 5.07EE483 pKa = 4.5IDD485 pKa = 4.79SILLLIMGDD494 pKa = 3.84DD495 pKa = 3.68NSGFTIWSIARR506 pKa = 11.84LEE508 pKa = 3.93QFITFLEE515 pKa = 4.99SYY517 pKa = 10.76ALTRR521 pKa = 11.84YY522 pKa = 9.48GMVMSKK528 pKa = 9.09TKK530 pKa = 10.84SLVTVLRR537 pKa = 11.84HH538 pKa = 6.49KK539 pKa = 10.52IQTLSYY545 pKa = 8.4TCNFGRR551 pKa = 11.84PLRR554 pKa = 11.84PIPEE558 pKa = 4.38LVAHH562 pKa = 6.37LVFPEE567 pKa = 4.63RR568 pKa = 11.84EE569 pKa = 4.1FKK571 pKa = 10.1PQFMSARR578 pKa = 11.84AVGMAWASCAQDD590 pKa = 3.22KK591 pKa = 9.26TFHH594 pKa = 6.69DD595 pKa = 4.71FCRR598 pKa = 11.84DD599 pKa = 2.86VFYY602 pKa = 10.52EE603 pKa = 3.96YY604 pKa = 10.92LEE606 pKa = 4.25EE607 pKa = 4.66SVPVDD612 pKa = 3.3NTNIAWIQSHH622 pKa = 6.37LPGYY626 pKa = 10.34LRR628 pKa = 11.84VDD630 pKa = 3.52PEE632 pKa = 4.16VTKK635 pKa = 10.55MIDD638 pKa = 3.39LNVFPSFLHH647 pKa = 6.08VSQKK651 pKa = 10.14LSRR654 pKa = 11.84WQGPLSYY661 pKa = 10.28QPKK664 pKa = 8.69WDD666 pKa = 3.58LAHH669 pKa = 7.45FINQPDD675 pKa = 4.46VIPDD679 pKa = 3.44DD680 pKa = 4.7SITMFEE686 pKa = 4.06YY687 pKa = 9.82MQEE690 pKa = 4.03HH691 pKa = 6.57SLSLDD696 pKa = 3.06IQFDD700 pKa = 3.97LFSAA704 pKa = 4.31

Molecular weight: 82.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1342

638

704

671.0

76.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.079 ± 1.707

0.671 ± 0.03

6.334 ± 0.044

3.949 ± 0.56

6.11 ± 0.645

4.024 ± 0.467

3.651 ± 0.184

5.44 ± 0.399

3.651 ± 0.355

9.985 ± 0.076

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.459 ± 0.074

4.918 ± 0.822

6.408 ± 0.228

3.502 ± 0.792

5.365 ± 0.564

7.228 ± 0.228

7.675 ± 0.866

5.291 ± 0.189

1.043 ± 0.178

5.216 ± 0.138
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski