Human adenovirus sp.

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; unclassified Human adenoviruses

Average proteome isoelectric point is 6.33

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 27 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1W6HVP9|A0A1W6HVP9_9ADEN E3-19K OS=Human adenovirus sp. OX=1907210 PE=3 SV=1
MM1 pKa = 7.34RR2 pKa = 11.84HH3 pKa = 6.25LRR5 pKa = 11.84FLPQEE10 pKa = 4.33IISAEE15 pKa = 4.03TGNEE19 pKa = 3.27ILEE22 pKa = 4.52FVVHH26 pKa = 6.97ALMGDD31 pKa = 3.71DD32 pKa = 4.84PEE34 pKa = 5.93PPVQLFEE41 pKa = 4.7PPTLQEE47 pKa = 4.5LYY49 pKa = 10.31DD50 pKa = 4.17LEE52 pKa = 4.77VEE54 pKa = 4.35GSEE57 pKa = 4.86DD58 pKa = 3.8SNEE61 pKa = 3.83EE62 pKa = 3.77AVNGFFTDD70 pKa = 3.97SMLLAANEE78 pKa = 4.13GLEE81 pKa = 4.61LDD83 pKa = 4.47PPLDD87 pKa = 3.81TFDD90 pKa = 3.65TPGVIVEE97 pKa = 4.52SGTGVRR103 pKa = 11.84KK104 pKa = 9.9LPDD107 pKa = 4.4LGSVDD112 pKa = 4.89CDD114 pKa = 3.2LHH116 pKa = 8.32CYY118 pKa = 10.19EE119 pKa = 5.87DD120 pKa = 4.7GFPLSDD126 pKa = 3.31EE127 pKa = 4.09EE128 pKa = 5.17DD129 pKa = 3.58RR130 pKa = 11.84EE131 pKa = 4.4KK132 pKa = 11.14EE133 pKa = 4.08QFMQTAAGEE142 pKa = 4.52GVKK145 pKa = 10.16AASVGFQLDD154 pKa = 3.96CPEE157 pKa = 4.73LPGHH161 pKa = 5.76GCKK164 pKa = 10.06SCEE167 pKa = 3.93FHH169 pKa = 7.55RR170 pKa = 11.84KK171 pKa = 6.24NTGVKK176 pKa = 9.89EE177 pKa = 4.01LLCSLCYY184 pKa = 9.86MRR186 pKa = 11.84AHH188 pKa = 6.47CHH190 pKa = 6.56FIYY193 pKa = 10.49SKK195 pKa = 10.92CVV197 pKa = 2.88

Molecular weight: 21.83 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1W6HVP8|A0A1W6HVP8_9ADEN Early E1A protein OS=Human adenovirus sp. OX=1907210 PE=3 SV=1
MM1 pKa = 7.7SKK3 pKa = 10.43RR4 pKa = 11.84KK5 pKa = 9.85YY6 pKa = 9.79KK7 pKa = 10.9EE8 pKa = 3.54EE9 pKa = 3.89MLQVIAPEE17 pKa = 4.73VYY19 pKa = 9.76GQPLKK24 pKa = 10.9DD25 pKa = 3.29EE26 pKa = 4.48KK27 pKa = 10.91KK28 pKa = 8.53PRR30 pKa = 11.84KK31 pKa = 9.09IKK33 pKa = 10.18RR34 pKa = 11.84AKK36 pKa = 9.47KK37 pKa = 9.74DD38 pKa = 3.34KK39 pKa = 10.97KK40 pKa = 10.65EE41 pKa = 4.15EE42 pKa = 3.99EE43 pKa = 4.72DD44 pKa = 4.04GDD46 pKa = 4.23DD47 pKa = 3.73GLAEE51 pKa = 4.4FVRR54 pKa = 11.84EE55 pKa = 3.86FAPRR59 pKa = 11.84RR60 pKa = 11.84RR61 pKa = 11.84VQWRR65 pKa = 11.84GRR67 pKa = 11.84KK68 pKa = 8.6VRR70 pKa = 11.84HH71 pKa = 5.92LLRR74 pKa = 11.84PGTSVVFTPGEE85 pKa = 3.87RR86 pKa = 11.84SSATFKK92 pKa = 10.65RR93 pKa = 11.84SYY95 pKa = 11.27DD96 pKa = 3.53EE97 pKa = 5.21VYY99 pKa = 11.03GDD101 pKa = 5.76DD102 pKa = 6.37DD103 pKa = 4.14ILEE106 pKa = 4.15QAADD110 pKa = 3.8RR111 pKa = 11.84LGEE114 pKa = 3.76FAYY117 pKa = 10.26GKK119 pKa = 10.08RR120 pKa = 11.84SRR122 pKa = 11.84INPKK126 pKa = 10.42DD127 pKa = 3.46EE128 pKa = 4.27TVSIPLDD135 pKa = 3.78HH136 pKa = 7.08GNPTPSLKK144 pKa = 10.31PVTLQQVLPVTPRR157 pKa = 11.84TGVKK161 pKa = 10.0RR162 pKa = 11.84EE163 pKa = 4.06GEE165 pKa = 3.96DD166 pKa = 4.36LYY168 pKa = 10.28PTMQLMVPKK177 pKa = 9.82RR178 pKa = 11.84QKK180 pKa = 11.1LEE182 pKa = 3.99DD183 pKa = 3.51VLEE186 pKa = 4.25KK187 pKa = 11.2VKK189 pKa = 10.61VDD191 pKa = 3.69PDD193 pKa = 3.28IQPEE197 pKa = 4.48VKK199 pKa = 9.97VRR201 pKa = 11.84PIKK204 pKa = 10.32QVAPGLGVQTVDD216 pKa = 2.93IKK218 pKa = 11.14IPTEE222 pKa = 3.9SMEE225 pKa = 4.38VQTEE229 pKa = 4.07PAKK232 pKa = 9.51PTATSTEE239 pKa = 4.22VQTDD243 pKa = 2.89PWMPMPITTDD253 pKa = 2.91AAGPTRR259 pKa = 11.84RR260 pKa = 11.84SRR262 pKa = 11.84RR263 pKa = 11.84KK264 pKa = 9.41YY265 pKa = 10.39GPASLLMPNYY275 pKa = 9.18VVHH278 pKa = 6.52PSIIPTPGYY287 pKa = 9.95RR288 pKa = 11.84GTRR291 pKa = 11.84YY292 pKa = 9.37YY293 pKa = 10.8RR294 pKa = 11.84SRR296 pKa = 11.84NSTSRR301 pKa = 11.84RR302 pKa = 11.84RR303 pKa = 11.84RR304 pKa = 11.84KK305 pKa = 7.96TPANRR310 pKa = 11.84SRR312 pKa = 11.84RR313 pKa = 11.84RR314 pKa = 11.84RR315 pKa = 11.84RR316 pKa = 11.84TSKK319 pKa = 8.65PTPGALVRR327 pKa = 11.84QVYY330 pKa = 9.83RR331 pKa = 11.84NSSAEE336 pKa = 4.0PLTLPRR342 pKa = 11.84ARR344 pKa = 11.84YY345 pKa = 8.46HH346 pKa = 6.34PSIITT351 pKa = 3.35

Molecular weight: 40.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

24

3

27

8516

54

1122

315.4

35.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.858 ± 0.329

1.973 ± 0.416

5.202 ± 0.197

6.247 ± 0.406

3.84 ± 0.243

6.118 ± 0.286

2.302 ± 0.238

4.357 ± 0.305

4.556 ± 0.393

9.382 ± 0.498

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.994 ± 0.255

4.979 ± 0.451

6.329 ± 0.36

4.439 ± 0.287

6.353 ± 0.413

6.881 ± 0.33

6.165 ± 0.457

6.118 ± 0.351

1.327 ± 0.131

3.581 ± 0.307
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski