Capronia coronata CBS 617.96

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Capronia; Capronia coronata

Average proteome isoelectric point is 6.47

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 9230 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W9Y7F1|W9Y7F1_9EURO Uncharacterized protein OS=Capronia coronata CBS 617.96 OX=1182541 GN=A1O1_05919 PE=3 SV=1
MM1 pKa = 7.86DD2 pKa = 5.09RR3 pKa = 11.84PVLLLLWLSLSYY15 pKa = 10.85VSWAQPSLSIVTSVVYY31 pKa = 8.23VTSTICPVPPSCLRR45 pKa = 11.84STSSVSSTSLPPSTTTNSPIEE66 pKa = 4.46TTTSTTSGAVASPTDD81 pKa = 3.64DD82 pKa = 3.85PFTIRR87 pKa = 11.84VLTQDD92 pKa = 3.06GGLQKK97 pKa = 9.75RR98 pKa = 11.84TYY100 pKa = 10.07HH101 pKa = 5.91YY102 pKa = 11.16VAFDD106 pKa = 3.74DD107 pKa = 4.44SVAVTVDD114 pKa = 3.67DD115 pKa = 4.79LQDD118 pKa = 3.17AALFYY123 pKa = 9.98LTNGYY128 pKa = 9.81LISDD132 pKa = 3.79GMFIGVTNATGFQLLQKK149 pKa = 10.1YY150 pKa = 7.1GQPVNVSQGWTMGPDD165 pKa = 2.83RR166 pKa = 11.84GVSFHH171 pKa = 6.69GALFTTEE178 pKa = 5.39DD179 pKa = 3.46GTADD183 pKa = 4.12FCALPDD189 pKa = 3.61GTLVMEE195 pKa = 4.8ITDD198 pKa = 3.92SPDD201 pKa = 2.94IYY203 pKa = 11.27SDD205 pKa = 3.99AEE207 pKa = 4.15LAALPNAVYY216 pKa = 10.41DD217 pKa = 3.9EE218 pKa = 4.07RR219 pKa = 11.84RR220 pKa = 11.84KK221 pKa = 10.32FGSVGLDD228 pKa = 3.35DD229 pKa = 5.95QPGYY233 pKa = 9.56WNNGNNDD240 pKa = 3.2NDD242 pKa = 3.67RR243 pKa = 4.75

Molecular weight: 26.16 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W9XS87|W9XS87_9EURO Uncharacterized protein OS=Capronia coronata CBS 617.96 OX=1182541 GN=A1O1_08352 PE=4 SV=1
MM1 pKa = 7.14VLGRR5 pKa = 11.84KK6 pKa = 6.75TRR8 pKa = 11.84HH9 pKa = 5.92HH10 pKa = 7.06PGGTTVTTTTTTTHH24 pKa = 6.5HH25 pKa = 6.92PGSTGATARR34 pKa = 11.84GRR36 pKa = 11.84AVGIKK41 pKa = 7.79QTLMQRR47 pKa = 11.84LRR49 pKa = 11.84GRR51 pKa = 11.84TTPRR55 pKa = 11.84ATATTPQPARR65 pKa = 11.84RR66 pKa = 11.84SRR68 pKa = 11.84FGGTRR73 pKa = 11.84TNRR76 pKa = 11.84APVTATPRR84 pKa = 11.84RR85 pKa = 11.84KK86 pKa = 8.35TSISDD91 pKa = 3.64KK92 pKa = 10.91VSGAMLKK99 pKa = 10.57LRR101 pKa = 11.84GTLTSRR107 pKa = 11.84SGQKK111 pKa = 9.98AAGSRR116 pKa = 11.84RR117 pKa = 11.84MHH119 pKa = 5.76GTDD122 pKa = 2.88GRR124 pKa = 11.84GTRR127 pKa = 11.84RR128 pKa = 11.84YY129 pKa = 9.34YY130 pKa = 11.13

Molecular weight: 14.02 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9230

0

9230

4650262

50

6216

503.8

55.65

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.807 ± 0.018

1.13 ± 0.009

5.813 ± 0.018

6.122 ± 0.025

3.571 ± 0.015

6.892 ± 0.021

2.455 ± 0.011

4.673 ± 0.018

4.74 ± 0.023

8.833 ± 0.029

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.157 ± 0.009

3.503 ± 0.014

6.192 ± 0.028

4.177 ± 0.018

6.244 ± 0.022

8.281 ± 0.03

6.112 ± 0.02

6.196 ± 0.017

1.397 ± 0.01

2.706 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski