Flavobacterium sp. 102

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium; unclassified Flavobacterium

Average proteome isoelectric point is 6.59

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3318 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A495KNL4|A0A495KNL4_9FLAO Dihydroorotase OS=Flavobacterium sp. 102 OX=2135623 GN=C8C84_2407 PE=4 SV=1
MM1 pKa = 7.55KK2 pKa = 10.52KK3 pKa = 10.2NLFFLLFIAFLTTNCFSQFSKK24 pKa = 8.35THH26 pKa = 6.21YY27 pKa = 9.98IPPLSGSSNVTAEE40 pKa = 4.07DD41 pKa = 3.28QFIYY45 pKa = 10.54ISTPNINPINFRR57 pKa = 11.84IIEE60 pKa = 4.2LGGSVINGSVSRR72 pKa = 11.84STPFIYY78 pKa = 10.64NIGFGNDD85 pKa = 3.19TQLHH89 pKa = 5.47VDD91 pKa = 3.93ASQTNNTFSNKK102 pKa = 9.49GYY104 pKa = 10.18IIEE107 pKa = 4.9ADD109 pKa = 3.49DD110 pKa = 5.02LIYY113 pKa = 11.18VSARR117 pKa = 11.84VTAGNGNHH125 pKa = 6.81AGEE128 pKa = 4.55LVSKK132 pKa = 10.68GKK134 pKa = 10.6ASLGNRR140 pKa = 11.84FRR142 pKa = 11.84IGAITNLTVDD152 pKa = 4.34NYY154 pKa = 11.39NDD156 pKa = 2.8IHH158 pKa = 5.5TTFISVLASEE168 pKa = 5.02NNTTVNFSDD177 pKa = 4.75FKK179 pKa = 11.12PGVQLINSSTGDD191 pKa = 3.53SPFSIVLNSGEE202 pKa = 4.39SYY204 pKa = 10.89VIAVQGPLNPNRR216 pKa = 11.84DD217 pKa = 3.58GLIGSLVTSDD227 pKa = 4.84KK228 pKa = 10.9PIALNCGSFGGSNAAGNLDD247 pKa = 3.99LGFDD251 pKa = 3.68QIVPAEE257 pKa = 4.17RR258 pKa = 11.84INNNEE263 pKa = 3.96YY264 pKa = 10.54IFIKK268 pKa = 9.68STGVDD273 pKa = 2.85IVEE276 pKa = 4.46TVLLVADD283 pKa = 3.93VDD285 pKa = 3.86NTEE288 pKa = 4.12VFLSGSTTPDD298 pKa = 3.07VILNAGNYY306 pKa = 9.92AVFNGSSFDD315 pKa = 4.23LNGNLYY321 pKa = 9.95IRR323 pKa = 11.84TNQKK327 pKa = 9.19VFAYY331 pKa = 7.92QTIGDD336 pKa = 4.23NSASDD341 pKa = 3.44QRR343 pKa = 11.84NQEE346 pKa = 4.12MFFVPPLSCQTPRR359 pKa = 11.84IIDD362 pKa = 4.21NIPSIDD368 pKa = 3.8YY369 pKa = 10.28VGSRR373 pKa = 11.84QFTGRR378 pKa = 11.84VTIVTKK384 pKa = 10.37TGASLNFIIDD394 pKa = 3.59GTNYY398 pKa = 9.56TLAEE402 pKa = 4.32LSLITNITGPTNVVGNNNYY421 pKa = 6.19QTYY424 pKa = 10.57VITGLSGDD432 pKa = 3.52VSVFSTEE439 pKa = 3.87EE440 pKa = 4.17LYY442 pKa = 11.03LAAYY446 pKa = 6.32GTSGAATFGGFYY458 pKa = 10.32SGFTFEE464 pKa = 5.02PEE466 pKa = 3.96VSFTQLDD473 pKa = 4.25LSQANCIPNTSLSVNTLSPFDD494 pKa = 3.54TFQWYY499 pKa = 9.88FNGNIIPSATSSSYY513 pKa = 10.95VPSTLGPGYY522 pKa = 9.81YY523 pKa = 9.39YY524 pKa = 11.24VSATISNCSLPINSNEE540 pKa = 3.89IPVSICSIDD549 pKa = 3.6TDD551 pKa = 4.4NDD553 pKa = 3.64GTNNNIDD560 pKa = 4.48LDD562 pKa = 4.01NDD564 pKa = 3.22NDD566 pKa = 5.37GITNCNEE573 pKa = 3.91SYY575 pKa = 11.31GDD577 pKa = 3.44QGVNLTNTAIGSVNIDD593 pKa = 3.04NYY595 pKa = 9.91TNSFTGSVAFSGTGTPSATPIVGDD619 pKa = 3.61ANGNFVTEE627 pKa = 4.27AANGKK632 pKa = 6.86QNKK635 pKa = 9.33VSFTTSWNNPISLAVEE651 pKa = 4.23YY652 pKa = 8.5ATTALGDD659 pKa = 4.05DD660 pKa = 4.65LFTTSTEE667 pKa = 3.69IRR669 pKa = 11.84ITCPINKK676 pKa = 8.66TLTILNPDD684 pKa = 3.38NQVLVDD690 pKa = 3.68TNYY693 pKa = 11.34DD694 pKa = 3.68GIFEE698 pKa = 4.37SGITEE703 pKa = 3.91YY704 pKa = 11.3SSFEE708 pKa = 3.35IRR710 pKa = 11.84FRR712 pKa = 11.84LNDD715 pKa = 3.71NVPLVAGTGTFSVRR729 pKa = 11.84GNLIDD734 pKa = 5.52AIIVTNVNLVDD745 pKa = 3.98TNTSRR750 pKa = 11.84AAMRR754 pKa = 11.84LIATCVPKK762 pKa = 10.89DD763 pKa = 3.52SDD765 pKa = 3.74NDD767 pKa = 4.03GVPDD771 pKa = 4.3QIDD774 pKa = 3.34WDD776 pKa = 4.28SDD778 pKa = 3.15NDD780 pKa = 4.31TIPDD784 pKa = 4.85FIEE787 pKa = 4.22SQGQNISPLTNVDD800 pKa = 3.77TNNDD804 pKa = 4.13GIDD807 pKa = 3.66DD808 pKa = 4.37LFGAGTTAADD818 pKa = 4.11SDD820 pKa = 4.07TDD822 pKa = 4.59GIPNYY827 pKa = 10.61LDD829 pKa = 4.76LDD831 pKa = 3.96SDD833 pKa = 3.79NDD835 pKa = 4.69GIFDD839 pKa = 4.49IIEE842 pKa = 4.33SGSTGNGSNTNGVTINPVGSNGLDD866 pKa = 3.25NGLEE870 pKa = 4.03TALDD874 pKa = 3.68NGIINYY880 pKa = 8.1TIADD884 pKa = 3.68SDD886 pKa = 3.98ADD888 pKa = 3.69GVLNYY893 pKa = 9.98IEE895 pKa = 5.45IDD897 pKa = 3.92SDD899 pKa = 4.42DD900 pKa = 5.01DD901 pKa = 3.79GCKK904 pKa = 10.38DD905 pKa = 3.27VTEE908 pKa = 5.13AGFTDD913 pKa = 3.81TNNDD917 pKa = 4.1GIVGDD922 pKa = 4.03DD923 pKa = 3.75TPTVVANQGQVISSSGYY940 pKa = 8.82GVPNGDD946 pKa = 3.69YY947 pKa = 10.07TISAPISISAHH958 pKa = 5.41PVDD961 pKa = 3.85VTTCEE966 pKa = 4.07LQSATFTITSVTVDD980 pKa = 3.28SYY982 pKa = 11.22QWQLSTDD989 pKa = 4.6DD990 pKa = 3.7EE991 pKa = 4.83TSWTDD996 pKa = 3.29LANNATYY1003 pKa = 10.86AGVNTVSLTVSNVSPSMVGYY1023 pKa = 9.96KK1024 pKa = 10.32YY1025 pKa = 10.44RR1026 pKa = 11.84VFINKK1031 pKa = 9.25NGNACGLYY1039 pKa = 10.26SEE1041 pKa = 5.62AATLTTFALPVITTPISLIQCDD1063 pKa = 4.79DD1064 pKa = 3.57DD1065 pKa = 3.76TDD1067 pKa = 5.01AISVFNLTQKK1077 pKa = 11.17NDD1079 pKa = 3.89MISANYY1085 pKa = 10.04LNEE1088 pKa = 3.94TFSYY1092 pKa = 8.14FTSSAAANTEE1102 pKa = 3.79NSSFEE1107 pKa = 3.83ITNPLAYY1114 pKa = 9.28TSGNASVYY1122 pKa = 10.87ARR1124 pKa = 11.84VEE1126 pKa = 3.93NSDD1129 pKa = 3.08GCFRR1133 pKa = 11.84VAQINLIVSVTQIPANFVIPNQYY1156 pKa = 10.84LCDD1159 pKa = 5.0DD1160 pKa = 4.33YY1161 pKa = 11.88LDD1163 pKa = 4.31AANDD1167 pKa = 3.7DD1168 pKa = 3.96RR1169 pKa = 11.84DD1170 pKa = 4.55GISGPFNFTAIQNSLAAILPNNTTIKK1196 pKa = 10.24FYY1198 pKa = 9.72KK1199 pKa = 10.03TEE1201 pKa = 4.16ADD1203 pKa = 4.36FLAEE1207 pKa = 4.09TDD1209 pKa = 3.49ASGNPLAIADD1219 pKa = 3.46ITNYY1223 pKa = 10.54RR1224 pKa = 11.84NIGFTNTQKK1233 pKa = 10.03IWVRR1237 pKa = 11.84VDD1239 pKa = 3.14STIDD1243 pKa = 3.27NSCFGFKK1250 pKa = 10.16TFDD1253 pKa = 3.54VVVEE1257 pKa = 4.26ALPVANPMNANNLIRR1272 pKa = 11.84QCDD1275 pKa = 3.86DD1276 pKa = 3.3DD1277 pKa = 5.42HH1278 pKa = 8.0DD1279 pKa = 4.27GTFGFDD1285 pKa = 2.89TSGIQTAVLNGQTGVNVTYY1304 pKa = 10.35FRR1306 pKa = 11.84ADD1308 pKa = 3.14GTQILPFTNPYY1319 pKa = 10.36NVTGTEE1325 pKa = 4.22TITIRR1330 pKa = 11.84VNNNITQTGGQPCYY1344 pKa = 10.85DD1345 pKa = 3.5EE1346 pKa = 5.77VSLQFIVDD1354 pKa = 4.1DD1355 pKa = 4.32LPEE1358 pKa = 4.67AFAVPTTLTTTCDD1371 pKa = 3.57DD1372 pKa = 3.86EE1373 pKa = 6.24ANSIDD1378 pKa = 4.11QDD1380 pKa = 3.88GLFDD1384 pKa = 5.22FDD1386 pKa = 3.66TSTFLSTIIGTQTGMNVYY1404 pKa = 10.45YY1405 pKa = 10.53YY1406 pKa = 10.64DD1407 pKa = 4.21EE1408 pKa = 4.9NNVLIPSSIPNQLPNPFRR1426 pKa = 11.84TATQNVTVVVEE1437 pKa = 3.84NAINNSCSVQVILPFVVNPTPKK1459 pKa = 8.83IDD1461 pKa = 3.57QEE1463 pKa = 4.26EE1464 pKa = 4.32TVIICIPATQVLIDD1478 pKa = 3.88AGIVDD1483 pKa = 4.85GTPTSNYY1490 pKa = 7.99TYY1492 pKa = 9.72QWYY1495 pKa = 9.38FNNVIMPGRR1504 pKa = 11.84TNYY1507 pKa = 10.88SLIASTPGIYY1517 pKa = 10.16SVTVTNSFGCSKK1529 pKa = 9.74TRR1531 pKa = 11.84IITVNGSEE1539 pKa = 4.14IATLQSIDD1547 pKa = 3.82VVDD1550 pKa = 4.87LSDD1553 pKa = 3.55INSISVIVSGSGAYY1567 pKa = 9.18EE1568 pKa = 4.18FSLDD1572 pKa = 4.88DD1573 pKa = 4.42INGPYY1578 pKa = 9.37QDD1580 pKa = 4.53SGLFNNVPMGLHH1592 pKa = 5.2QLYY1595 pKa = 10.25IRR1597 pKa = 11.84DD1598 pKa = 3.86KK1599 pKa = 10.4NGCGSLGPIGIPVLGIPQYY1618 pKa = 8.02FTPNGDD1624 pKa = 3.42GFHH1627 pKa = 7.65DD1628 pKa = 3.75YY1629 pKa = 10.88WNVKK1633 pKa = 8.1GVSMFSNTNSIIFIFDD1649 pKa = 3.4RR1650 pKa = 11.84YY1651 pKa = 10.64GKK1653 pKa = 10.07LLKK1656 pKa = 10.07QLNAFSPGWDD1666 pKa = 2.93GTYY1669 pKa = 10.73NGNQMPADD1677 pKa = 4.6DD1678 pKa = 4.29YY1679 pKa = 10.83WYY1681 pKa = 10.51SIQFDD1686 pKa = 3.53DD1687 pKa = 3.66GRR1689 pKa = 11.84NVKK1692 pKa = 9.68GHH1694 pKa = 6.4FALKK1698 pKa = 10.27RR1699 pKa = 3.54

Molecular weight: 182.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A495KLC1|A0A495KLC1_9FLAO FkbM family methyltransferase OS=Flavobacterium sp. 102 OX=2135623 GN=C8C84_1577 PE=4 SV=1
MM1 pKa = 7.84PSGKK5 pKa = 9.32KK6 pKa = 9.59RR7 pKa = 11.84KK8 pKa = 7.05RR9 pKa = 11.84HH10 pKa = 5.11KK11 pKa = 10.59VATHH15 pKa = 5.35KK16 pKa = 10.31RR17 pKa = 11.84KK18 pKa = 9.82KK19 pKa = 8.65RR20 pKa = 11.84ARR22 pKa = 11.84ANRR25 pKa = 11.84HH26 pKa = 4.91KK27 pKa = 10.59KK28 pKa = 9.82KK29 pKa = 10.51KK30 pKa = 10.04

Molecular weight: 3.68 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3318

0

3318

1143900

29

5181

344.8

38.78

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.505 ± 0.056

0.867 ± 0.028

5.249 ± 0.037

6.252 ± 0.069

5.352 ± 0.04

6.198 ± 0.056

1.62 ± 0.022

8.038 ± 0.047

7.677 ± 0.098

9.025 ± 0.054

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.154 ± 0.027

6.59 ± 0.048

3.405 ± 0.033

3.512 ± 0.025

3.061 ± 0.035

6.61 ± 0.058

6.5 ± 0.118

6.312 ± 0.042

1.01 ± 0.016

4.064 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski