Beihai permutotetra-like virus 2

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 6.94

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1L3KHU9|A0A1L3KHU9_9VIRU RdRp OS=Beihai permutotetra-like virus 2 OX=1922513 PE=4 SV=1
MM1 pKa = 7.87DD2 pKa = 5.44ASNPVSSGDD11 pKa = 3.35KK12 pKa = 9.72VTFADD17 pKa = 4.27LKK19 pKa = 10.86EE20 pKa = 4.61DD21 pKa = 3.5SLLLKK26 pKa = 10.12RR27 pKa = 11.84QNFEE31 pKa = 3.98EE32 pKa = 4.18LKK34 pKa = 10.65KK35 pKa = 11.14LIGTSPRR42 pKa = 11.84TPAPYY47 pKa = 10.01VGRR50 pKa = 11.84NEE52 pKa = 3.67YY53 pKa = 10.68DD54 pKa = 3.3YY55 pKa = 11.83DD56 pKa = 4.17EE57 pKa = 6.01DD58 pKa = 4.58VVKK61 pKa = 10.99DD62 pKa = 4.35LIKK65 pKa = 10.56PIAVAKK71 pKa = 9.9GNPEE75 pKa = 3.84VGFLTEE81 pKa = 3.7AAKK84 pKa = 10.77VRR86 pKa = 11.84VCSFHH91 pKa = 6.77TMGEE95 pKa = 4.1NQEE98 pKa = 4.37DD99 pKa = 4.15NNVSMKK105 pKa = 8.78QTYY108 pKa = 10.0KK109 pKa = 9.54IAKK112 pKa = 8.67RR113 pKa = 11.84DD114 pKa = 3.5RR115 pKa = 11.84KK116 pKa = 10.23LVEE119 pKa = 3.88VCLKK123 pKa = 10.82SGAQSDD129 pKa = 4.1DD130 pKa = 3.1IKK132 pKa = 11.16RR133 pKa = 11.84LIYY136 pKa = 8.2TTGNKK141 pKa = 9.8EE142 pKa = 4.09GFSKK146 pKa = 10.68RR147 pKa = 11.84LRR149 pKa = 11.84LWATKK154 pKa = 9.84KK155 pKa = 10.6VPSPKK160 pKa = 9.64TAMEE164 pKa = 4.21KK165 pKa = 10.71YY166 pKa = 9.52NIKK169 pKa = 10.67FEE171 pKa = 4.41DD172 pKa = 3.35VRR174 pKa = 11.84AALPVGKK181 pKa = 10.14GLPNWNGNIEE191 pKa = 4.08EE192 pKa = 4.81FISGVRR198 pKa = 11.84VNKK201 pKa = 10.45SSGAGPPFYY210 pKa = 9.65RR211 pKa = 11.84TKK213 pKa = 10.51RR214 pKa = 11.84QCLDD218 pKa = 3.35DD219 pKa = 4.76CFDD222 pKa = 6.11AIGKK226 pKa = 8.84LIKK229 pKa = 9.9EE230 pKa = 4.48ANQDD234 pKa = 3.59HH235 pKa = 7.2LDD237 pKa = 3.31KK238 pKa = 10.78FLRR241 pKa = 11.84EE242 pKa = 3.95NEE244 pKa = 4.1EE245 pKa = 4.72FLVCQCKK252 pKa = 10.52NKK254 pKa = 8.99TDD256 pKa = 3.94RR257 pKa = 11.84YY258 pKa = 9.89PPDD261 pKa = 3.56KK262 pKa = 10.52LHH264 pKa = 6.79EE265 pKa = 4.07KK266 pKa = 8.13TRR268 pKa = 11.84PYY270 pKa = 10.79FSFSFPTQFLCSALNQPFTDD290 pKa = 3.38NMLLFHH296 pKa = 7.15EE297 pKa = 5.33SGANACGFSYY307 pKa = 11.4ADD309 pKa = 3.91GGSQRR314 pKa = 11.84LFDD317 pKa = 3.79WMCDD321 pKa = 3.46TEE323 pKa = 4.15EE324 pKa = 6.03GEE326 pKa = 5.22VKK328 pKa = 10.45FCAYY332 pKa = 10.38GDD334 pKa = 3.7DD335 pKa = 3.31VRR337 pKa = 11.84MVKK340 pKa = 10.38RR341 pKa = 11.84EE342 pKa = 3.94DD343 pKa = 3.44GVLYY347 pKa = 10.61SCSPDD352 pKa = 3.69FQCMDD357 pKa = 3.31GSIHH361 pKa = 5.45KK362 pKa = 8.91TEE364 pKa = 3.69AAEE367 pKa = 3.96YY368 pKa = 9.43VDD370 pKa = 5.28YY371 pKa = 11.24VLHH374 pKa = 6.52CYY376 pKa = 8.7EE377 pKa = 4.87RR378 pKa = 11.84EE379 pKa = 4.09HH380 pKa = 6.96GPSNFWKK387 pKa = 10.57FVGEE391 pKa = 4.09VWKK394 pKa = 10.36KK395 pKa = 9.59QLVGAKK401 pKa = 9.45FFVNGSQPYY410 pKa = 9.38RR411 pKa = 11.84SEE413 pKa = 3.98TGLLTGCVGTTGVDD427 pKa = 3.25TFKK430 pKa = 11.19SVTAFVTLIEE440 pKa = 4.09AHH442 pKa = 5.91KK443 pKa = 10.16HH444 pKa = 4.64YY445 pKa = 10.69GVDD448 pKa = 2.9IMNVEE453 pKa = 4.08EE454 pKa = 4.57VKK456 pKa = 11.21NFMRR460 pKa = 11.84EE461 pKa = 3.76NFGLVLKK468 pKa = 10.71GDD470 pKa = 4.2TYY472 pKa = 11.39QWDD475 pKa = 3.91EE476 pKa = 4.04VQEE479 pKa = 3.97EE480 pKa = 4.69LEE482 pKa = 4.5EE483 pKa = 4.82GEE485 pKa = 4.3QPNAQEE491 pKa = 3.99FLGVQLKK498 pKa = 10.57AVTGKK503 pKa = 9.82NRR505 pKa = 11.84LEE507 pKa = 4.05VIPYY511 pKa = 9.66KK512 pKa = 10.54EE513 pKa = 3.96EE514 pKa = 4.01SDD516 pKa = 3.61IVSLIANARR525 pKa = 11.84VPEE528 pKa = 4.07EE529 pKa = 3.78VRR531 pKa = 11.84DD532 pKa = 3.88LKK534 pKa = 10.62KK535 pKa = 7.39TTGRR539 pKa = 11.84ARR541 pKa = 11.84YY542 pKa = 9.49LFDD545 pKa = 3.59CARR548 pKa = 11.84GYY550 pKa = 10.25MITAAFLHH558 pKa = 6.2EE559 pKa = 4.58KK560 pKa = 8.01TWNICSRR567 pKa = 11.84LIEE570 pKa = 4.13EE571 pKa = 4.7TNTEE575 pKa = 4.52VICMRR580 pKa = 11.84VQTGKK585 pKa = 10.76KK586 pKa = 9.65VDD588 pKa = 3.52GEE590 pKa = 4.44YY591 pKa = 10.9GGEE594 pKa = 4.19GPEE597 pKa = 4.2LVDD600 pKa = 5.52LVGEE604 pKa = 4.3DD605 pKa = 4.17FTWPSSDD612 pKa = 2.77GWPSIDD618 pKa = 3.59FCVDD622 pKa = 3.18VYY624 pKa = 11.06LSPDD628 pKa = 3.29NKK630 pKa = 10.48RR631 pKa = 11.84GGLWYY636 pKa = 10.19DD637 pKa = 3.4CVPALRR643 pKa = 11.84EE644 pKa = 3.82KK645 pKa = 10.77LDD647 pKa = 3.84EE648 pKa = 4.22IKK650 pKa = 10.35RR651 pKa = 11.84YY652 pKa = 9.66RR653 pKa = 11.84SLRR656 pKa = 11.84DD657 pKa = 3.3PHH659 pKa = 6.79HH660 pKa = 6.53VPPVVSRR667 pKa = 11.84EE668 pKa = 3.98VQTTSWAEE676 pKa = 3.74EE677 pKa = 4.27VEE679 pKa = 4.4TEE681 pKa = 4.22RR682 pKa = 11.84GRR684 pKa = 11.84EE685 pKa = 3.83QAEE688 pKa = 3.71LAMEE692 pKa = 4.93RR693 pKa = 11.84KK694 pKa = 9.54RR695 pKa = 11.84DD696 pKa = 3.73PTVDD700 pKa = 3.06SEE702 pKa = 4.95GYY704 pKa = 9.73LRR706 pKa = 11.84SFLEE710 pKa = 3.87EE711 pKa = 3.88RR712 pKa = 11.84TPLMKK717 pKa = 9.9PVKK720 pKa = 9.84YY721 pKa = 9.56PKK723 pKa = 10.52EE724 pKa = 3.84FVKK727 pKa = 11.04YY728 pKa = 10.0KK729 pKa = 10.04ATTQSVPKK737 pKa = 9.81EE738 pKa = 3.87KK739 pKa = 9.95RR740 pKa = 11.84IEE742 pKa = 3.89NAIPEE747 pKa = 4.5GAEE750 pKa = 3.69KK751 pKa = 10.18FHH753 pKa = 7.39RR754 pKa = 11.84DD755 pKa = 4.72FIPLVTNLAPGKK767 pKa = 9.32CAEE770 pKa = 4.2VLISLGWRR778 pKa = 11.84PSPSEE783 pKa = 4.34SYY785 pKa = 9.12WEE787 pKa = 4.26KK788 pKa = 11.16GPLVPVRR795 pKa = 11.84DD796 pKa = 4.15SDD798 pKa = 3.62WTRR801 pKa = 11.84AEE803 pKa = 4.1LDD805 pKa = 3.33RR806 pKa = 11.84LKK808 pKa = 10.49EE809 pKa = 3.97VPRR812 pKa = 11.84RR813 pKa = 11.84EE814 pKa = 3.92TKK816 pKa = 10.71SRR818 pKa = 11.84VKK820 pKa = 10.26VARR823 pKa = 11.84DD824 pKa = 3.04GKK826 pKa = 7.34TWCEE830 pKa = 3.85VPDD833 pKa = 4.06DD834 pKa = 4.24VKK836 pKa = 11.35LSDD839 pKa = 3.57RR840 pKa = 11.84QVDD843 pKa = 3.94VVSRR847 pKa = 11.84VSYY850 pKa = 10.21SFVNAGHH857 pKa = 6.59ILDD860 pKa = 3.76RR861 pKa = 11.84KK862 pKa = 8.64YY863 pKa = 9.28TVLEE867 pKa = 3.98NSPNPWGVLQVTYY880 pKa = 10.56RR881 pKa = 11.84GTGVLVGEE889 pKa = 4.52GFGVKK894 pKa = 9.48KK895 pKa = 10.81DD896 pKa = 3.65EE897 pKa = 4.18ATSAVFEE904 pKa = 4.55LMMEE908 pKa = 4.68RR909 pKa = 11.84IMAKK913 pKa = 9.84EE914 pKa = 3.89AGPLTSEE921 pKa = 4.66IVTTEE926 pKa = 3.61NGEE929 pKa = 4.0NRR931 pKa = 11.84ATEE934 pKa = 4.06SEE936 pKa = 4.11AARR939 pKa = 11.84EE940 pKa = 4.02EE941 pKa = 4.28EE942 pKa = 4.05TAEE945 pKa = 4.13TEE947 pKa = 4.44RR948 pKa = 11.84EE949 pKa = 3.98TEE951 pKa = 3.94EE952 pKa = 4.4RR953 pKa = 11.84NEE955 pKa = 4.22SGSTQTVAPASEE967 pKa = 4.38GKK969 pKa = 10.32DD970 pKa = 3.29GGNN973 pKa = 3.33

Molecular weight:
110.25 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1L3KHU9|A0A1L3KHU9_9VIRU RdRp OS=Beihai permutotetra-like virus 2 OX=1922513 PE=4 SV=1
MM1 pKa = 7.41VKK3 pKa = 9.41TEE5 pKa = 3.87QQRR8 pKa = 11.84AKK10 pKa = 9.79QRR12 pKa = 11.84EE13 pKa = 3.62RR14 pKa = 11.84RR15 pKa = 11.84RR16 pKa = 11.84RR17 pKa = 11.84QRR19 pKa = 11.84QNARR23 pKa = 11.84LRR25 pKa = 11.84KK26 pKa = 9.34EE27 pKa = 4.21MNQEE31 pKa = 3.73APRR34 pKa = 11.84PLPQRR39 pKa = 11.84QRR41 pKa = 11.84GRR43 pKa = 11.84MGGIKK48 pKa = 10.07RR49 pKa = 11.84NCFDD53 pKa = 4.08GNDD56 pKa = 4.42LISSVDD62 pKa = 3.49VPATAKK68 pKa = 10.37SGTVIARR75 pKa = 11.84VDD77 pKa = 3.19ICPSKK82 pKa = 10.96FPGTSLWRR90 pKa = 11.84QAQLYY95 pKa = 9.8ANWKK99 pKa = 7.63PARR102 pKa = 11.84KK103 pKa = 9.27LKK105 pKa = 10.58IVVQPSAGTTTSGSYY120 pKa = 10.48IMGWTMDD127 pKa = 3.73SKK129 pKa = 11.7LDD131 pKa = 3.78IPSGDD136 pKa = 3.29NAVRR140 pKa = 11.84TVATFEE146 pKa = 3.8RR147 pKa = 11.84RR148 pKa = 11.84QTAKK152 pKa = 10.1IYY154 pKa = 9.41EE155 pKa = 4.32KK156 pKa = 10.93KK157 pKa = 10.31EE158 pKa = 3.6LNIPLKK164 pKa = 9.79TVQALLFTDD173 pKa = 3.93SSKK176 pKa = 11.17EE177 pKa = 3.93DD178 pKa = 3.37SDD180 pKa = 3.45QGSFYY185 pKa = 11.07LVLSSGIGNLTTGSVVSFNIYY206 pKa = 9.44IDD208 pKa = 3.67YY209 pKa = 10.97DD210 pKa = 3.26IDD212 pKa = 3.78FEE214 pKa = 4.68NRR216 pKa = 11.84LATPDD221 pKa = 3.44TSSSFIYY228 pKa = 9.68PDD230 pKa = 3.81PGYY233 pKa = 10.91EE234 pKa = 5.4SYY236 pKa = 9.17FTDD239 pKa = 3.64NGDD242 pKa = 4.26GITKK246 pKa = 10.57LSLKK250 pKa = 9.58HH251 pKa = 6.37AEE253 pKa = 4.42GGALVPFHH261 pKa = 6.43QSIPEE266 pKa = 3.78AVYY269 pKa = 10.21EE270 pKa = 4.13FVGEE274 pKa = 4.05SLKK277 pKa = 10.69YY278 pKa = 10.25CKK280 pKa = 9.87TGEE283 pKa = 4.17TSATATGIVTHH294 pKa = 6.41AVRR297 pKa = 11.84IRR299 pKa = 11.84GRR301 pKa = 11.84PDD303 pKa = 2.6GALYY307 pKa = 10.82VFEE310 pKa = 5.45NNTKK314 pKa = 9.85ASAYY318 pKa = 10.39ASTGDD323 pKa = 3.63EE324 pKa = 4.72DD325 pKa = 4.25NCITYY330 pKa = 10.04VAAGPWVSPTGAGFKK345 pKa = 10.36QISSPSALYY354 pKa = 10.75SNRR357 pKa = 11.84LNN359 pKa = 3.59

Molecular weight:
39.62 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1332

359

973

666.0

74.93

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.381 ± 0.805

1.877 ± 0.362

6.081 ± 0.242

8.859 ± 1.957

4.054 ± 0.205

7.282 ± 0.245

1.276 ± 0.209

3.754 ± 0.862

7.207 ± 0.644

6.757 ± 0.298

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.652 ± 0.123

4.129 ± 0.155

5.105 ± 0.089

3.078 ± 0.654

6.456 ± 0.241

6.757 ± 1.156

6.456 ± 0.637

7.808 ± 0.929

1.502 ± 0.184

3.529 ± 0.308

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski