Rose rosette emaravirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Fimoviridae; Emaravirus

Average proteome isoelectric point is 6.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F2YBR2|F2YBR2_9VIRU Replicase OS=Rose rosette emaravirus OX=1980433 PE=4 SV=1
MM1 pKa = 6.58EE2 pKa = 4.95QKK4 pKa = 9.59TFMKK8 pKa = 9.99TYY10 pKa = 10.17KK11 pKa = 10.74ALVNNKK17 pKa = 9.41FSDD20 pKa = 3.78HH21 pKa = 5.71FCEE24 pKa = 5.31LEE26 pKa = 3.98TAIFNSMIEE35 pKa = 3.85ILDD38 pKa = 3.53NDD40 pKa = 3.81EE41 pKa = 4.85EE42 pKa = 4.55YY43 pKa = 11.23SEE45 pKa = 5.53VIVLHH50 pKa = 6.91DD51 pKa = 4.94AYY53 pKa = 11.08LKK55 pKa = 10.33NQLEE59 pKa = 4.28FSEE62 pKa = 5.2INYY65 pKa = 6.9QTQQIEE71 pKa = 3.98ISGMKK76 pKa = 8.93IQKK79 pKa = 9.79KK80 pKa = 7.38SLRR83 pKa = 11.84KK84 pKa = 9.01FLRR87 pKa = 11.84YY88 pKa = 9.28LQITCSLFGLTSVLPEE104 pKa = 4.6SIHH107 pKa = 7.18HH108 pKa = 6.94DD109 pKa = 3.06FHH111 pKa = 9.46IFGTLVRR118 pKa = 11.84GEE120 pKa = 4.68RR121 pKa = 11.84IFPYY125 pKa = 10.24IPDD128 pKa = 3.54HH129 pKa = 5.81SQYY132 pKa = 11.86LLMSSNIVKK141 pKa = 10.6AIVKK145 pKa = 9.29QVVLGYY151 pKa = 10.54DD152 pKa = 3.52PEE154 pKa = 4.23DD155 pKa = 4.0TIIKK159 pKa = 9.9AQSQQQEE166 pKa = 4.16DD167 pKa = 4.11VNYY170 pKa = 10.81LEE172 pKa = 4.38STVAFLFHH180 pKa = 5.63VHH182 pKa = 7.02AIAYY186 pKa = 5.79TTGRR190 pKa = 11.84LNNKK194 pKa = 9.54LPLEE198 pKa = 4.05THH200 pKa = 6.59QINNTINNASASSVMVIDD218 pKa = 5.21DD219 pKa = 4.14KK220 pKa = 11.85YY221 pKa = 10.19DD222 pKa = 3.35TKK224 pKa = 11.34LEE226 pKa = 3.84EE227 pKa = 4.32TVYY230 pKa = 10.87HH231 pKa = 5.59NHH233 pKa = 6.37

Molecular weight: 27.05 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0K0M9E3|A0A0K0M9E3_9VIRU p5 OS=Rose rosette emaravirus OX=1980433 GN=ORF5 PE=4 SV=1
MM1 pKa = 7.44LVLHH5 pKa = 5.96QSWLLMINMILSLKK19 pKa = 9.19KK20 pKa = 10.38LCIIIIKK27 pKa = 9.03TKK29 pKa = 9.01TLIRR33 pKa = 11.84CNKK36 pKa = 8.58YY37 pKa = 8.04WYY39 pKa = 10.18CSISLSLNYY48 pKa = 10.27NSLQALVSFIMFYY61 pKa = 10.42II62 pKa = 4.27

Molecular weight: 7.39 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

4825

62

2276

603.1

69.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.104 ± 0.538

1.762 ± 0.401

6.321 ± 0.421

5.741 ± 0.502

4.58 ± 0.193

3.13 ± 0.238

2.591 ± 0.407

9.451 ± 0.541

8.601 ± 0.209

9.492 ± 0.315

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.57 ± 0.231

7.109 ± 0.308

3.358 ± 0.234

2.528 ± 0.378

3.212 ± 0.333

7.088 ± 0.216

6.052 ± 0.491

5.803 ± 0.915

0.56 ± 0.155

5.948 ± 0.665
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski