Emilia yellow vein virus-associated DNA beta

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite

Average proteome isoelectric point is 4.82

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C3VIY0|C3VIY0_9VIRU C1 OS=Emilia yellow vein virus-associated DNA beta OX=640136 GN=C1 PE=4 SV=1
MM1 pKa = 7.59QIMTITYY8 pKa = 10.12KK9 pKa = 9.14NTKK12 pKa = 8.05GVKK15 pKa = 10.14FIIDD19 pKa = 3.25VRR21 pKa = 11.84LCPRR25 pKa = 11.84LNVQVTMISTKK36 pKa = 10.57EE37 pKa = 4.04PILSKK42 pKa = 10.16ATYY45 pKa = 8.0TLPYY49 pKa = 8.44NHH51 pKa = 6.55NEE53 pKa = 3.57IEE55 pKa = 4.22EE56 pKa = 4.36PFDD59 pKa = 4.2FNGTEE64 pKa = 3.68EE65 pKa = 4.89AIRR68 pKa = 11.84NTIQVMVHH76 pKa = 7.19DD77 pKa = 5.05IPFNDD82 pKa = 4.11IKK84 pKa = 11.23SEE86 pKa = 4.72DD87 pKa = 3.73ILDD90 pKa = 4.59SIDD93 pKa = 3.05ITMMDD98 pKa = 3.48RR99 pKa = 11.84FVFIDD104 pKa = 4.21LDD106 pKa = 3.65TGGTCKK112 pKa = 9.56TRR114 pKa = 11.84CICTLL119 pKa = 3.32

Molecular weight: 13.7 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C3VIY0|C3VIY0_9VIRU C1 OS=Emilia yellow vein virus-associated DNA beta OX=640136 GN=C1 PE=4 SV=1
MM1 pKa = 7.59QIMTITYY8 pKa = 10.12KK9 pKa = 9.14NTKK12 pKa = 8.05GVKK15 pKa = 10.14FIIDD19 pKa = 3.25VRR21 pKa = 11.84LCPRR25 pKa = 11.84LNVQVTMISTKK36 pKa = 10.57EE37 pKa = 4.04PILSKK42 pKa = 10.16ATYY45 pKa = 8.0TLPYY49 pKa = 8.44NHH51 pKa = 6.55NEE53 pKa = 3.57IEE55 pKa = 4.22EE56 pKa = 4.36PFDD59 pKa = 4.2FNGTEE64 pKa = 3.68EE65 pKa = 4.89AIRR68 pKa = 11.84NTIQVMVHH76 pKa = 7.19DD77 pKa = 5.05IPFNDD82 pKa = 4.11IKK84 pKa = 11.23SEE86 pKa = 4.72DD87 pKa = 3.73ILDD90 pKa = 4.59SIDD93 pKa = 3.05ITMMDD98 pKa = 3.48RR99 pKa = 11.84FVFIDD104 pKa = 4.21LDD106 pKa = 3.65TGGTCKK112 pKa = 9.56TRR114 pKa = 11.84CICTLL119 pKa = 3.32

Molecular weight: 13.7 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

119

119

119

119.0

13.7

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

1.681 ± 0.0

3.361 ± 0.0

8.403 ± 0.0

5.882 ± 0.0

5.042 ± 0.0

3.361 ± 0.0

1.681 ± 0.0

13.445 ± 0.0

5.882 ± 0.0

5.882 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

5.042 ± 0.0

5.882 ± 0.0

4.202 ± 0.0

2.521 ± 0.0

4.202 ± 0.0

3.361 ± 0.0

11.765 ± 0.0

5.882 ± 0.0

0.0 ± 0.0

2.521 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski