Mimosa yellow leaf curl virus satellite DNA beta

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite

Average proteome isoelectric point is 5.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A5H1F4|A5H1F4_9VIRU C1 protein OS=Mimosa yellow leaf curl virus satellite DNA beta OX=447600 GN=C1 PE=4 SV=1
MM1 pKa = 7.28HH2 pKa = 7.5SKK4 pKa = 7.93MTIQYY9 pKa = 9.7RR10 pKa = 11.84NKK12 pKa = 9.7KK13 pKa = 8.62GLRR16 pKa = 11.84FMIDD20 pKa = 2.54VRR22 pKa = 11.84LQGEE26 pKa = 4.31RR27 pKa = 11.84FVMVKK32 pKa = 9.67IRR34 pKa = 11.84FSSTRR39 pKa = 11.84APALIKK45 pKa = 10.4RR46 pKa = 11.84RR47 pKa = 11.84FNIPYY52 pKa = 9.19GHH54 pKa = 7.46DD55 pKa = 4.0GIIAPFDD62 pKa = 4.05FNGLEE67 pKa = 4.12TEE69 pKa = 4.43IKK71 pKa = 11.07DD72 pKa = 3.37MMEE75 pKa = 4.17ILFKK79 pKa = 10.84DD80 pKa = 3.42ASLEE84 pKa = 4.22TFKK87 pKa = 10.95PEE89 pKa = 4.74EE90 pKa = 4.03MVQTIDD96 pKa = 3.52IIMMHH101 pKa = 6.82EE102 pKa = 4.27ANVMDD107 pKa = 4.19INLDD111 pKa = 3.01VDD113 pKa = 3.77YY114 pKa = 11.33DD115 pKa = 3.79VANNVGAA122 pKa = 4.38

Molecular weight: 14.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A5H1F4|A5H1F4_9VIRU C1 protein OS=Mimosa yellow leaf curl virus satellite DNA beta OX=447600 GN=C1 PE=4 SV=1
MM1 pKa = 7.28HH2 pKa = 7.5SKK4 pKa = 7.93MTIQYY9 pKa = 9.7RR10 pKa = 11.84NKK12 pKa = 9.7KK13 pKa = 8.62GLRR16 pKa = 11.84FMIDD20 pKa = 2.54VRR22 pKa = 11.84LQGEE26 pKa = 4.31RR27 pKa = 11.84FVMVKK32 pKa = 9.67IRR34 pKa = 11.84FSSTRR39 pKa = 11.84APALIKK45 pKa = 10.4RR46 pKa = 11.84RR47 pKa = 11.84FNIPYY52 pKa = 9.19GHH54 pKa = 7.46DD55 pKa = 4.0GIIAPFDD62 pKa = 4.05FNGLEE67 pKa = 4.12TEE69 pKa = 4.43IKK71 pKa = 11.07DD72 pKa = 3.37MMEE75 pKa = 4.17ILFKK79 pKa = 10.84DD80 pKa = 3.42ASLEE84 pKa = 4.22TFKK87 pKa = 10.95PEE89 pKa = 4.74EE90 pKa = 4.03MVQTIDD96 pKa = 3.52IIMMHH101 pKa = 6.82EE102 pKa = 4.27ANVMDD107 pKa = 4.19INLDD111 pKa = 3.01VDD113 pKa = 3.77YY114 pKa = 11.33DD115 pKa = 3.79VANNVGAA122 pKa = 4.38

Molecular weight: 14.19 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

122

122

122

122.0

14.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.738 ± 0.0

0.0 ± 0.0

8.197 ± 0.0

6.557 ± 0.0

6.557 ± 0.0

4.918 ± 0.0

2.459 ± 0.0

10.656 ± 0.0

6.557 ± 0.0

5.738 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

8.197 ± 0.0

5.738 ± 0.0

3.279 ± 0.0

2.459 ± 0.0

6.557 ± 0.0

3.279 ± 0.0

4.098 ± 0.0

6.557 ± 0.0

0.0 ± 0.0

2.459 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski