Wood mouse herpesvirus

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Rhadinovirus; Murid gammaherpesvirus 7

Average proteome isoelectric point is 6.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 74 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D0U1P1|D0U1P1_9GAMA Virion protein G52 OS=Wood mouse herpesvirus OX=432370 GN=ORF52 PE=1 SV=1
MM1 pKa = 7.57CGVKK5 pKa = 10.28PIVKK9 pKa = 9.85CFLLFHH15 pKa = 7.34IINFLGTYY23 pKa = 9.08NVGWVPGTPLCAAQAVDD40 pKa = 5.09GITSRR45 pKa = 11.84EE46 pKa = 3.86MEE48 pKa = 4.35INATLAPSSGATLSLLVTLSNNNPPTAMRR77 pKa = 11.84PPVAQNGEE85 pKa = 4.4SVSIDD90 pKa = 3.44NSSAPASDD98 pKa = 3.58PTTSNPSSPEE108 pKa = 3.89EE109 pKa = 4.34APTAAPITPIPTSTAAQSAEE129 pKa = 4.16HH130 pKa = 6.57VGEE133 pKa = 4.3TDD135 pKa = 3.67SEE137 pKa = 4.7APTPLPTTPKK147 pKa = 10.05PSSQEE152 pKa = 4.07DD153 pKa = 4.65EE154 pKa = 4.26PTMTSPTEE162 pKa = 4.1TPPTTTAAISTEE174 pKa = 3.96QDD176 pKa = 3.37DD177 pKa = 4.15EE178 pKa = 4.67TEE180 pKa = 4.59PEE182 pKa = 4.52SPAPPPATPEE192 pKa = 4.3PEE194 pKa = 4.13TTTPTKK200 pKa = 10.55NQEE203 pKa = 4.1DD204 pKa = 4.74EE205 pKa = 4.28PTINTSDD212 pKa = 3.43QGDD215 pKa = 4.09DD216 pKa = 3.54SSSDD220 pKa = 3.34IPAGTPGPTTPPKK233 pKa = 10.56QEE235 pKa = 4.03TEE237 pKa = 3.93TTKK240 pKa = 10.82PVDD243 pKa = 3.5SKK245 pKa = 11.4PQVEE249 pKa = 4.78PNDD252 pKa = 4.07SAPSDD257 pKa = 3.54IPEE260 pKa = 4.6TSDD263 pKa = 3.31STPTPVTDD271 pKa = 3.57PTSPPSVEE279 pKa = 4.07EE280 pKa = 3.94TSPAEE285 pKa = 4.02PSTPDD290 pKa = 3.23STPPADD296 pKa = 4.22PPAPQPTPPAEE307 pKa = 4.41PSTPDD312 pKa = 3.32STPQDD317 pKa = 3.73EE318 pKa = 4.92PSTPDD323 pKa = 3.14STPPADD329 pKa = 4.22PPAPQPTPPAEE340 pKa = 4.36PSTPEE345 pKa = 3.86STPPADD351 pKa = 4.1PPAAQPTPQAEE362 pKa = 4.3PSTPDD367 pKa = 2.98STSPSDD373 pKa = 3.85PPASQPTLPEE383 pKa = 4.52KK384 pKa = 10.49PPSPEE389 pKa = 3.55PMTPQSGPAITPEE402 pKa = 3.62IATPSTTEE410 pKa = 3.65PGAGKK415 pKa = 9.61DD416 pKa = 3.31ASMGATTTQAASALTTKK433 pKa = 10.24PMRR436 pKa = 11.84VVPDD440 pKa = 3.58VSTMLWIRR448 pKa = 11.84PTVAIVLIFLLMSIFHH464 pKa = 6.88IMYY467 pKa = 8.91CVCLHH472 pKa = 6.12EE473 pKa = 4.44

Molecular weight: 48.6 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D0U1L1|D0U1L1_9GAMA Thymidine kinase OS=Wood mouse herpesvirus OX=432370 GN=ORF21 PE=3 SV=1
MM1 pKa = 7.94DD2 pKa = 4.34EE3 pKa = 4.88KK4 pKa = 11.09GAKK7 pKa = 9.11QLLNKK12 pKa = 9.92LPKK15 pKa = 9.66RR16 pKa = 11.84RR17 pKa = 11.84ARR19 pKa = 11.84AGKK22 pKa = 8.89LAHH25 pKa = 5.4VRR27 pKa = 11.84CYY29 pKa = 10.57RR30 pKa = 11.84AMQGASNILQLLEE43 pKa = 4.08SLKK46 pKa = 10.16IAHH49 pKa = 6.52QITHH53 pKa = 6.65PVGSRR58 pKa = 11.84LFFEE62 pKa = 4.5VTLGRR67 pKa = 11.84RR68 pKa = 11.84VVDD71 pKa = 4.63AIIVVFSEE79 pKa = 4.29SSPHH83 pKa = 4.79IHH85 pKa = 6.93CFLIEE90 pKa = 4.49LKK92 pKa = 9.19TCKK95 pKa = 10.06INFFNHH101 pKa = 5.93NSTTRR106 pKa = 11.84EE107 pKa = 3.83AQRR110 pKa = 11.84VEE112 pKa = 4.25GSSQLRR118 pKa = 11.84DD119 pKa = 3.24SARR122 pKa = 11.84ALTLLAPVGTDD133 pKa = 3.15PCRR136 pKa = 11.84VTAHH140 pKa = 7.4LIFKK144 pKa = 7.91SQRR147 pKa = 11.84GLHH150 pKa = 5.06TLKK153 pKa = 10.72SYY155 pKa = 9.43TLTWMTHH162 pKa = 5.79TINTQKK168 pKa = 10.68VALLNFLGLNADD180 pKa = 3.77NEE182 pKa = 4.23LRR184 pKa = 11.84ACLTKK189 pKa = 10.59GLPPARR195 pKa = 11.84SLGRR199 pKa = 11.84RR200 pKa = 11.84SHH202 pKa = 6.01VCLLEE207 pKa = 4.24PKK209 pKa = 9.12PQKK212 pKa = 9.84HH213 pKa = 5.55LKK215 pKa = 8.78NRR217 pKa = 11.84RR218 pKa = 11.84GGASRR223 pKa = 11.84NQKK226 pKa = 9.72ARR228 pKa = 11.84RR229 pKa = 11.84QGVGPKK235 pKa = 9.8VSHH238 pKa = 7.42DD239 pKa = 3.45KK240 pKa = 10.59TGNAPAHH247 pKa = 5.52AAGRR251 pKa = 11.84AGG253 pKa = 3.44

Molecular weight: 28.03 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

72

2

74

35050

75

2455

473.6

53.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.886 ± 0.178

2.636 ± 0.175

4.805 ± 0.144

5.193 ± 0.138

4.514 ± 0.168

5.101 ± 0.207

2.862 ± 0.112

6.117 ± 0.179

5.187 ± 0.228

10.439 ± 0.268

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.491 ± 0.119

4.362 ± 0.119

6.191 ± 0.338

3.74 ± 0.12

4.217 ± 0.179

8.18 ± 0.201

7.384 ± 0.253

6.163 ± 0.204

1.096 ± 0.066

3.438 ± 0.13
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski