Moranella endobia (strain PCIT)

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Candidatus Moranella; Candidatus Moranella endobia

Average proteome isoelectric point is 7.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 405 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F7XY41|F7XY41_MOREP 50S ribosomal protein L23 OS=Moranella endobia (strain PCIT) OX=903503 GN=rplW PE=3 SV=1
MM1 pKa = 7.8AYY3 pKa = 9.56ISIVFGSDD11 pKa = 2.48TGNTEE16 pKa = 4.43NIAKK20 pKa = 9.05MLQQKK25 pKa = 10.43LGTEE29 pKa = 4.21VADD32 pKa = 4.86LFDD35 pKa = 4.05IANSSEE41 pKa = 4.17KK42 pKa = 10.66DD43 pKa = 3.19LEE45 pKa = 4.3QYY47 pKa = 11.0DD48 pKa = 4.21RR49 pKa = 11.84LLLGIPTWYY58 pKa = 10.37YY59 pKa = 11.64GEE61 pKa = 4.69AQCDD65 pKa = 3.21WDD67 pKa = 4.63DD68 pKa = 3.82FFPRR72 pKa = 11.84LEE74 pKa = 4.71NIDD77 pKa = 4.32FSSKK81 pKa = 8.31MVAIFGCGDD90 pKa = 3.25QEE92 pKa = 5.04DD93 pKa = 4.3YY94 pKa = 11.79AEE96 pKa = 4.32YY97 pKa = 10.5FCDD100 pKa = 4.7AMGTLRR106 pKa = 11.84DD107 pKa = 3.63IIEE110 pKa = 4.44PKK112 pKa = 8.87GATMVGHH119 pKa = 7.28WPTSGYY125 pKa = 10.2HH126 pKa = 4.64FHH128 pKa = 7.25ASKK131 pKa = 11.13GMVDD135 pKa = 3.64DD136 pKa = 3.86AHH138 pKa = 6.9FIGLAIDD145 pKa = 4.1EE146 pKa = 4.62DD147 pKa = 4.24RR148 pKa = 11.84QPEE151 pKa = 4.35LTSEE155 pKa = 5.13RR156 pKa = 11.84VDD158 pKa = 2.95NWINQVRR165 pKa = 11.84VEE167 pKa = 4.23MNLSS171 pKa = 3.21

Molecular weight: 19.43 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F7XX64|F7XX64_MOREP Probable GTP-binding protein EngB OS=Moranella endobia (strain PCIT) OX=903503 GN=engB PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 9.53RR3 pKa = 11.84TFQPSILKK11 pKa = 10.36RR12 pKa = 11.84NRR14 pKa = 11.84THH16 pKa = 7.15GFRR19 pKa = 11.84ARR21 pKa = 11.84MSTNNGRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84VKK37 pKa = 10.57GRR39 pKa = 11.84IRR41 pKa = 11.84LTVSTKK47 pKa = 8.66ITT49 pKa = 3.33

Molecular weight: 5.8 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

405

0

405

137782

33

1402

340.2

37.93

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.428 ± 0.112

1.287 ± 0.037

4.947 ± 0.079

5.58 ± 0.112

3.499 ± 0.075

6.937 ± 0.111

2.483 ± 0.055

7.266 ± 0.088

5.067 ± 0.094

10.647 ± 0.146

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.78 ± 0.05

4.516 ± 0.076

3.805 ± 0.061

4.44 ± 0.075

5.925 ± 0.094

5.695 ± 0.083

5.489 ± 0.067

7.081 ± 0.106

1.057 ± 0.048

3.073 ± 0.071
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski