Rodent Torque teno virus 7

Taxonomy: Viruses; Anelloviridae; Wawtorquevirus; Torque teno rodent virus 3

Average proteome isoelectric point is 8.81

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H4QBC6|A0A2H4QBC6_9VIRU Capsid protein OS=Rodent Torque teno virus 7 OX=2054614 PE=3 SV=1
MM1 pKa = 7.87AYY3 pKa = 10.42YY4 pKa = 10.32SYY6 pKa = 10.62RR7 pKa = 11.84RR8 pKa = 11.84NWRR11 pKa = 11.84RR12 pKa = 11.84PFPRR16 pKa = 11.84RR17 pKa = 11.84GGYY20 pKa = 5.01WTRR23 pKa = 11.84RR24 pKa = 11.84LWTRR28 pKa = 11.84AYY30 pKa = 8.93HH31 pKa = 5.71RR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84GYY37 pKa = 8.19YY38 pKa = 7.42RR39 pKa = 11.84TYY41 pKa = 9.39RR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84WRR46 pKa = 11.84PVRR49 pKa = 11.84RR50 pKa = 11.84KK51 pKa = 10.06RR52 pKa = 11.84NYY54 pKa = 9.13HH55 pKa = 5.58PRR57 pKa = 11.84KK58 pKa = 8.54HH59 pKa = 5.55WVPVPQWNPSNKK71 pKa = 8.58RR72 pKa = 11.84WCTIRR77 pKa = 11.84GYY79 pKa = 9.77MPLLFCVGAPAGCAVFNYY97 pKa = 8.15PQKK100 pKa = 9.76TVSDD104 pKa = 3.59WKK106 pKa = 10.96GGGVHH111 pKa = 6.65SSVFSLADD119 pKa = 4.07LYY121 pKa = 11.14QEE123 pKa = 4.05EE124 pKa = 4.96TEE126 pKa = 4.34WRR128 pKa = 11.84CRR130 pKa = 11.84WSGSNQGFNLCRR142 pKa = 11.84YY143 pKa = 9.71YY144 pKa = 11.13GGTLCLWPNATYY156 pKa = 10.47SYY158 pKa = 10.64IFWYY162 pKa = 10.14SVNDD166 pKa = 4.1PEE168 pKa = 5.79PDD170 pKa = 3.45NLPLRR175 pKa = 11.84VCHH178 pKa = 6.35PSQMLVQPRR187 pKa = 11.84HH188 pKa = 5.13IVVTRR193 pKa = 11.84ASMHH197 pKa = 6.75RR198 pKa = 11.84NMKK201 pKa = 8.75PIKK204 pKa = 10.47VRR206 pKa = 11.84IPPPATLAGNWYY218 pKa = 10.35SMKK221 pKa = 10.91DD222 pKa = 3.38MCQKK226 pKa = 9.34TLFKK230 pKa = 10.39WRR232 pKa = 11.84VSLIDD237 pKa = 4.7MEE239 pKa = 4.54QTWTGFPDD247 pKa = 3.28GHH249 pKa = 7.75APVSAQVFACRR260 pKa = 11.84PGQEE264 pKa = 4.57ALTQTVLSYY273 pKa = 10.69YY274 pKa = 10.01PWLDD278 pKa = 3.49DD279 pKa = 3.92GNNVNISEE287 pKa = 4.25HH288 pKa = 4.73TMEE291 pKa = 4.78FNQTNSRR298 pKa = 11.84PTKK301 pKa = 7.3TANYY305 pKa = 7.9NWPIEE310 pKa = 3.98AQFRR314 pKa = 11.84KK315 pKa = 10.11LLLPFYY321 pKa = 8.91MWGFGFPTEE330 pKa = 4.27YY331 pKa = 11.11YY332 pKa = 8.66IDD334 pKa = 3.79SYY336 pKa = 11.03QWHH339 pKa = 7.08LPAPHH344 pKa = 7.17LDD346 pKa = 3.43SHH348 pKa = 6.59NKK350 pKa = 9.71NVMSFIFLSIKK361 pKa = 10.53AGAHH365 pKa = 3.61QWKK368 pKa = 9.88GFDD371 pKa = 3.51TTNVYY376 pKa = 9.83YY377 pKa = 11.13VPFSTLLKK385 pKa = 9.86IVCNAPWVEE394 pKa = 5.04KK395 pKa = 10.52SIQQPGVNVTMMYY408 pKa = 10.68KK409 pKa = 10.48FYY411 pKa = 10.12FQWGGKK417 pKa = 8.52PGSKK421 pKa = 10.03LPPVTPCDD429 pKa = 3.85PSAADD434 pKa = 3.31YY435 pKa = 11.02KK436 pKa = 10.89PIIEE440 pKa = 4.8HH441 pKa = 7.2PYY443 pKa = 9.16TYY445 pKa = 10.29DD446 pKa = 3.62AEE448 pKa = 4.63VPGPGDD454 pKa = 3.57YY455 pKa = 11.05DD456 pKa = 3.82SDD458 pKa = 4.49GIIRR462 pKa = 11.84EE463 pKa = 4.09GALRR467 pKa = 11.84RR468 pKa = 11.84LTRR471 pKa = 11.84SNIPTDD477 pKa = 3.16ARR479 pKa = 11.84KK480 pKa = 9.79LSRR483 pKa = 11.84SALHH487 pKa = 5.66QSAIAAYY494 pKa = 8.21RR495 pKa = 11.84TEE497 pKa = 4.75HH498 pKa = 6.4GPSSGEE504 pKa = 4.04SEE506 pKa = 4.29QEE508 pKa = 4.19EE509 pKa = 4.73EE510 pKa = 4.01DD511 pKa = 3.95TPYY514 pKa = 10.98LSCSSEE520 pKa = 4.06EE521 pKa = 4.23SQKK524 pKa = 9.86DD525 pKa = 3.69TPSSSVRR532 pKa = 11.84QRR534 pKa = 11.84LRR536 pKa = 11.84EE537 pKa = 3.66RR538 pKa = 11.84LGRR541 pKa = 11.84MDD543 pKa = 3.39RR544 pKa = 11.84HH545 pKa = 5.51RR546 pKa = 11.84LHH548 pKa = 7.45RR549 pKa = 11.84ILRR552 pKa = 11.84LLKK555 pKa = 9.84SGHH558 pKa = 6.8RR559 pKa = 11.84IHH561 pKa = 7.08TSTHH565 pKa = 5.13HH566 pKa = 6.17SGRR569 pKa = 11.84EE570 pKa = 3.67RR571 pKa = 11.84SSSII575 pKa = 3.47

Molecular weight: 67.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H4QBC6|A0A2H4QBC6_9VIRU Capsid protein OS=Rodent Torque teno virus 7 OX=2054614 PE=3 SV=1
MM1 pKa = 7.87AYY3 pKa = 10.42YY4 pKa = 10.32SYY6 pKa = 10.62RR7 pKa = 11.84RR8 pKa = 11.84NWRR11 pKa = 11.84RR12 pKa = 11.84PFPRR16 pKa = 11.84RR17 pKa = 11.84GGYY20 pKa = 5.01WTRR23 pKa = 11.84RR24 pKa = 11.84LWTRR28 pKa = 11.84AYY30 pKa = 8.93HH31 pKa = 5.71RR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84GYY37 pKa = 8.19YY38 pKa = 7.42RR39 pKa = 11.84TYY41 pKa = 9.39RR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84WRR46 pKa = 11.84PVRR49 pKa = 11.84RR50 pKa = 11.84KK51 pKa = 10.06RR52 pKa = 11.84NYY54 pKa = 9.13HH55 pKa = 5.58PRR57 pKa = 11.84KK58 pKa = 8.54HH59 pKa = 5.55WVPVPQWNPSNKK71 pKa = 8.58RR72 pKa = 11.84WCTIRR77 pKa = 11.84GYY79 pKa = 9.77MPLLFCVGAPAGCAVFNYY97 pKa = 8.15PQKK100 pKa = 9.76TVSDD104 pKa = 3.59WKK106 pKa = 10.96GGGVHH111 pKa = 6.65SSVFSLADD119 pKa = 4.07LYY121 pKa = 11.14QEE123 pKa = 4.05EE124 pKa = 4.96TEE126 pKa = 4.34WRR128 pKa = 11.84CRR130 pKa = 11.84WSGSNQGFNLCRR142 pKa = 11.84YY143 pKa = 9.71YY144 pKa = 11.13GGTLCLWPNATYY156 pKa = 10.47SYY158 pKa = 10.64IFWYY162 pKa = 10.14SVNDD166 pKa = 4.1PEE168 pKa = 5.79PDD170 pKa = 3.45NLPLRR175 pKa = 11.84VCHH178 pKa = 6.35PSQMLVQPRR187 pKa = 11.84HH188 pKa = 5.13IVVTRR193 pKa = 11.84ASMHH197 pKa = 6.75RR198 pKa = 11.84NMKK201 pKa = 8.75PIKK204 pKa = 10.47VRR206 pKa = 11.84IPPPATLAGNWYY218 pKa = 10.35SMKK221 pKa = 10.91DD222 pKa = 3.38MCQKK226 pKa = 9.34TLFKK230 pKa = 10.39WRR232 pKa = 11.84VSLIDD237 pKa = 4.7MEE239 pKa = 4.54QTWTGFPDD247 pKa = 3.28GHH249 pKa = 7.75APVSAQVFACRR260 pKa = 11.84PGQEE264 pKa = 4.57ALTQTVLSYY273 pKa = 10.69YY274 pKa = 10.01PWLDD278 pKa = 3.49DD279 pKa = 3.92GNNVNISEE287 pKa = 4.25HH288 pKa = 4.73TMEE291 pKa = 4.78FNQTNSRR298 pKa = 11.84PTKK301 pKa = 7.3TANYY305 pKa = 7.9NWPIEE310 pKa = 3.98AQFRR314 pKa = 11.84KK315 pKa = 10.11LLLPFYY321 pKa = 8.91MWGFGFPTEE330 pKa = 4.27YY331 pKa = 11.11YY332 pKa = 8.66IDD334 pKa = 3.79SYY336 pKa = 11.03QWHH339 pKa = 7.08LPAPHH344 pKa = 7.17LDD346 pKa = 3.43SHH348 pKa = 6.59NKK350 pKa = 9.71NVMSFIFLSIKK361 pKa = 10.53AGAHH365 pKa = 3.61QWKK368 pKa = 9.88GFDD371 pKa = 3.51TTNVYY376 pKa = 9.83YY377 pKa = 11.13VPFSTLLKK385 pKa = 9.86IVCNAPWVEE394 pKa = 5.04KK395 pKa = 10.52SIQQPGVNVTMMYY408 pKa = 10.68KK409 pKa = 10.48FYY411 pKa = 10.12FQWGGKK417 pKa = 8.52PGSKK421 pKa = 10.03LPPVTPCDD429 pKa = 3.85PSAADD434 pKa = 3.31YY435 pKa = 11.02KK436 pKa = 10.89PIIEE440 pKa = 4.8HH441 pKa = 7.2PYY443 pKa = 9.16TYY445 pKa = 10.29DD446 pKa = 3.62AEE448 pKa = 4.63VPGPGDD454 pKa = 3.57YY455 pKa = 11.05DD456 pKa = 3.82SDD458 pKa = 4.49GIIRR462 pKa = 11.84EE463 pKa = 4.09GALRR467 pKa = 11.84RR468 pKa = 11.84LTRR471 pKa = 11.84SNIPTDD477 pKa = 3.16ARR479 pKa = 11.84KK480 pKa = 9.79LSRR483 pKa = 11.84SALHH487 pKa = 5.66QSAIAAYY494 pKa = 8.21RR495 pKa = 11.84TEE497 pKa = 4.75HH498 pKa = 6.4GPSSGEE504 pKa = 4.04SEE506 pKa = 4.29QEE508 pKa = 4.19EE509 pKa = 4.73EE510 pKa = 4.01DD511 pKa = 3.95TPYY514 pKa = 10.98LSCSSEE520 pKa = 4.06EE521 pKa = 4.23SQKK524 pKa = 9.86DD525 pKa = 3.69TPSSSVRR532 pKa = 11.84QRR534 pKa = 11.84LRR536 pKa = 11.84EE537 pKa = 3.66RR538 pKa = 11.84LGRR541 pKa = 11.84MDD543 pKa = 3.39RR544 pKa = 11.84HH545 pKa = 5.51RR546 pKa = 11.84LHH548 pKa = 7.45RR549 pKa = 11.84ILRR552 pKa = 11.84LLKK555 pKa = 9.84SGHH558 pKa = 6.8RR559 pKa = 11.84IHH561 pKa = 7.08TSTHH565 pKa = 5.13HH566 pKa = 6.17SGRR569 pKa = 11.84EE570 pKa = 3.67RR571 pKa = 11.84SSSII575 pKa = 3.47

Molecular weight: 67.34 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

575

575

575

575.0

67.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.043 ± 0.0

2.087 ± 0.0

3.826 ± 0.0

4.174 ± 0.0

3.478 ± 0.0

6.087 ± 0.0

3.826 ± 0.0

3.826 ± 0.0

4.174 ± 0.0

6.435 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.435 ± 0.0

4.348 ± 0.0

8.0 ± 0.0

3.826 ± 0.0

9.565 ± 0.0

8.174 ± 0.0

5.739 ± 0.0

5.043 ± 0.0

3.826 ± 0.0

6.087 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski