Baboon orthoreovirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Reoviridae; Spinareovirinae; Orthoreovirus

Average proteome isoelectric point is 6.24

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q918V6|Q918V6_9REOV Membrane fusion protein p15 OS=Baboon orthoreovirus OX=75888 PE=1 SV=1
MM1 pKa = 7.14MEE3 pKa = 4.17EE4 pKa = 4.0TQMEE8 pKa = 4.7VSTFEE13 pKa = 4.04WPKK16 pKa = 11.25SLDD19 pKa = 3.1EE20 pKa = 4.34SLQVLCNEE28 pKa = 4.81LKK30 pKa = 10.94GKK32 pKa = 7.59TEE34 pKa = 3.9WQDD37 pKa = 4.92DD38 pKa = 4.03MEE40 pKa = 6.18DD41 pKa = 3.16WMPYY45 pKa = 8.04WIYY48 pKa = 10.27MKK50 pKa = 10.3HH51 pKa = 6.58DD52 pKa = 5.3GIAISQSRR60 pKa = 11.84YY61 pKa = 10.6SLLQQLAVWVWKK73 pKa = 10.86CFDD76 pKa = 4.5FDD78 pKa = 3.67MCVYY82 pKa = 10.56NIWTTWLVKK91 pKa = 9.79HH92 pKa = 6.07ACSRR96 pKa = 11.84CPEE99 pKa = 4.16FDD101 pKa = 5.99DD102 pKa = 3.7EE103 pKa = 5.0AFWSGVPTIIKK114 pKa = 9.98LVIRR118 pKa = 11.84KK119 pKa = 7.22TMHH122 pKa = 6.42RR123 pKa = 11.84YY124 pKa = 9.61AYY126 pKa = 10.78LDD128 pKa = 4.08DD129 pKa = 4.05STLADD134 pKa = 3.5LTEE137 pKa = 4.15QVGLL141 pKa = 3.99

Molecular weight: 16.85 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q918V6|Q918V6_9REOV Membrane fusion protein p15 OS=Baboon orthoreovirus OX=75888 PE=1 SV=1
MM1 pKa = 7.11GQRR4 pKa = 11.84HH5 pKa = 6.56SIVQPPAPPPNAFVEE20 pKa = 4.78IVSSSTGIIIAVGIFAFIFSFLYY43 pKa = 10.67KK44 pKa = 10.62LLQWYY49 pKa = 8.34NRR51 pKa = 11.84KK52 pKa = 9.64SKK54 pKa = 10.29NKK56 pKa = 9.23KK57 pKa = 8.49RR58 pKa = 11.84KK59 pKa = 7.21EE60 pKa = 3.87QIRR63 pKa = 11.84EE64 pKa = 3.98QIEE67 pKa = 4.39LGLLSYY73 pKa = 10.67GAGVASLPLLNVIAHH88 pKa = 6.24NPGSVISATPIYY100 pKa = 9.99KK101 pKa = 10.33GPCTGVPNSRR111 pKa = 11.84LLQITSGTAEE121 pKa = 4.06EE122 pKa = 4.05NTRR125 pKa = 11.84ILNHH129 pKa = 7.2DD130 pKa = 3.53GRR132 pKa = 11.84NPDD135 pKa = 2.83GSINVV140 pKa = 3.56

Molecular weight: 15.22 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11

0

11

7236

140

1284

657.8

74.6

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.818 ± 0.559

1.562 ± 0.169

6.191 ± 0.344

4.63 ± 0.357

3.994 ± 0.177

4.961 ± 0.337

2.64 ± 0.239

7.2 ± 0.299

4.671 ± 0.46

9.881 ± 0.299

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.054 ± 0.333

5.915 ± 0.305

4.768 ± 0.426

3.704 ± 0.24

4.92 ± 0.216

8.25 ± 0.311

5.735 ± 0.187

6.233 ± 0.222

1.423 ± 0.173

4.45 ± 0.379
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski