Plasmodium gonderi

Taxonomy: cellular organisms; Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)

Average proteome isoelectric point is 7.18

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5915 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Y1JIA4|A0A1Y1JIA4_PLAGO Non-specific serine/threonine protein kinase OS=Plasmodium gonderi OX=77519 GN=PGO_091160 PE=3 SV=1
MM1 pKa = 7.57EE2 pKa = 5.66EE3 pKa = 4.12GMSNNEE9 pKa = 3.94SSNGVLDD16 pKa = 4.23EE17 pKa = 4.59EE18 pKa = 4.54SQEE21 pKa = 4.16DD22 pKa = 4.2EE23 pKa = 4.68RR24 pKa = 11.84DD25 pKa = 3.28LSYY28 pKa = 10.65STFCNQEE35 pKa = 3.57EE36 pKa = 4.5GRR38 pKa = 11.84DD39 pKa = 3.58LSYY42 pKa = 11.62DD43 pKa = 3.48SFCNQEE49 pKa = 3.58EE50 pKa = 4.23RR51 pKa = 11.84GNISDD56 pKa = 3.46NSSYY60 pKa = 10.88NQEE63 pKa = 4.27EE64 pKa = 4.36EE65 pKa = 4.16IKK67 pKa = 10.06CQKK70 pKa = 10.8NEE72 pKa = 4.08DD73 pKa = 3.69HH74 pKa = 7.46DD75 pKa = 4.26GCANAGNYY83 pKa = 10.06LDD85 pKa = 5.46DD86 pKa = 4.67CNEE89 pKa = 3.9PKK91 pKa = 10.86GDD93 pKa = 4.03VRR95 pKa = 11.84DD96 pKa = 4.27KK97 pKa = 11.62EE98 pKa = 3.96NDD100 pKa = 3.14ADD102 pKa = 3.91GGQNEE107 pKa = 4.31EE108 pKa = 4.27EE109 pKa = 4.23EE110 pKa = 4.39EE111 pKa = 4.19EE112 pKa = 4.24EE113 pKa = 4.16EE114 pKa = 4.21EE115 pKa = 4.21EE116 pKa = 4.21EE117 pKa = 4.21EE118 pKa = 4.21EE119 pKa = 4.21EE120 pKa = 4.21EE121 pKa = 4.21EE122 pKa = 4.21EE123 pKa = 4.21EE124 pKa = 4.21EE125 pKa = 4.21EE126 pKa = 4.21EE127 pKa = 4.32EE128 pKa = 4.49EE129 pKa = 5.03EE130 pKa = 5.02EE131 pKa = 5.58EE132 pKa = 5.35EE133 pKa = 6.18DD134 pKa = 6.18DD135 pKa = 6.61DD136 pKa = 7.5DD137 pKa = 7.66DD138 pKa = 7.7DD139 pKa = 7.67DD140 pKa = 7.69DD141 pKa = 7.37DD142 pKa = 7.09DD143 pKa = 7.33DD144 pKa = 6.58YY145 pKa = 12.12DD146 pKa = 5.19DD147 pKa = 6.26DD148 pKa = 6.19EE149 pKa = 6.21YY150 pKa = 11.78DD151 pKa = 3.47EE152 pKa = 6.54DD153 pKa = 4.75DD154 pKa = 4.12FNEE157 pKa = 4.25ATVSWIEE164 pKa = 3.85WFCQLKK170 pKa = 10.52QNVFLVEE177 pKa = 3.73VDD179 pKa = 3.01EE180 pKa = 5.6DD181 pKa = 4.57FIRR184 pKa = 11.84DD185 pKa = 3.7EE186 pKa = 4.51FNLIGLQTKK195 pKa = 9.4VPHH198 pKa = 6.15FKK200 pKa = 10.65KK201 pKa = 10.34LLKK204 pKa = 10.33IILDD208 pKa = 4.07EE209 pKa = 6.84DD210 pKa = 5.47DD211 pKa = 6.35DD212 pKa = 7.41DD213 pKa = 7.56DD214 pKa = 7.67DD215 pKa = 7.63DD216 pKa = 7.14DD217 pKa = 6.94DD218 pKa = 6.04EE219 pKa = 6.22EE220 pKa = 6.6DD221 pKa = 6.07DD222 pKa = 4.29YY223 pKa = 12.15DD224 pKa = 5.36EE225 pKa = 6.96DD226 pKa = 5.22DD227 pKa = 5.26DD228 pKa = 4.99EE229 pKa = 5.65INRR232 pKa = 11.84GSDD235 pKa = 3.19EE236 pKa = 4.29LYY238 pKa = 10.5KK239 pKa = 11.25NKK241 pKa = 10.36DD242 pKa = 2.95IYY244 pKa = 9.74EE245 pKa = 4.04QNAACLYY252 pKa = 10.34GLIHH256 pKa = 6.74SRR258 pKa = 11.84FILTSKK264 pKa = 10.6GLALMRR270 pKa = 11.84EE271 pKa = 4.53KK272 pKa = 10.68YY273 pKa = 10.08KK274 pKa = 11.0SSIYY278 pKa = 8.53GTCPSIYY285 pKa = 9.91CDD287 pKa = 3.46NAKK290 pKa = 10.36LLPTAISEE298 pKa = 4.45VPKK301 pKa = 10.54FLSPLLYY308 pKa = 10.36CPRR311 pKa = 11.84CCEE314 pKa = 3.42TYY316 pKa = 10.3YY317 pKa = 10.09PHH319 pKa = 7.58KK320 pKa = 10.84NSLLNEE326 pKa = 4.14LDD328 pKa = 2.99GSYY331 pKa = 10.55FGTSFASFFALSFNIQSDD349 pKa = 3.52KK350 pKa = 11.0KK351 pKa = 10.21RR352 pKa = 11.84IYY354 pKa = 8.27YY355 pKa = 8.27TPQIFGFTINRR366 pKa = 11.84DD367 pKa = 2.7IRR369 pKa = 11.84EE370 pKa = 4.0NLFLDD375 pKa = 3.58MNKK378 pKa = 10.24EE379 pKa = 3.98NTEE382 pKa = 4.01SLEE385 pKa = 4.25EE386 pKa = 4.12YY387 pKa = 10.73SS388 pKa = 4.14

Molecular weight: 45.4 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Y1JIP1|A0A1Y1JIP1_PLAGO TBC domain protein OS=Plasmodium gonderi OX=77519 GN=PGO_120820 PE=4 SV=1
MM1 pKa = 7.28AHH3 pKa = 6.31GASRR7 pKa = 11.84YY8 pKa = 8.75KK9 pKa = 10.48KK10 pKa = 10.3SRR12 pKa = 11.84AKK14 pKa = 9.88MRR16 pKa = 11.84WKK18 pKa = 9.16WKK20 pKa = 9.29KK21 pKa = 9.72KK22 pKa = 6.67RR23 pKa = 11.84TRR25 pKa = 11.84RR26 pKa = 11.84LQKK29 pKa = 9.69KK30 pKa = 7.67RR31 pKa = 11.84RR32 pKa = 11.84KK33 pKa = 8.24MRR35 pKa = 11.84QRR37 pKa = 11.84SRR39 pKa = 3.22

Molecular weight: 5.09 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5915

0

5915

4048994

36

11537

684.5

79.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.865 ± 0.02

2.006 ± 0.015

5.666 ± 0.022

7.838 ± 0.045

4.634 ± 0.028

4.007 ± 0.029

2.499 ± 0.012

7.934 ± 0.036

10.839 ± 0.037

7.895 ± 0.035

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.34 ± 0.014

10.377 ± 0.054

2.308 ± 0.017

2.904 ± 0.014

3.761 ± 0.023

7.703 ± 0.027

4.523 ± 0.016

4.469 ± 0.016

0.579 ± 0.007

4.852 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski