Faecalicoccus pleomorphus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Erysipelotrichia;

Average proteome isoelectric point is 6.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1976 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A380LLL7|A0A380LLL7_9FIRM Polar amino acid transport system permease /substrate-binding protein OS=Faecalicoccus pleomorphus OX=1323 GN=fliY PE=4 SV=1
MM1 pKa = 7.43KK2 pKa = 10.02FVKK5 pKa = 10.43GFILIFSIVSILVFTASVVKK25 pKa = 10.46QFFSYY30 pKa = 10.62DD31 pKa = 2.91ASKK34 pKa = 10.53PVIVSDD40 pKa = 3.73VEE42 pKa = 4.39EE43 pKa = 4.79IEE45 pKa = 4.4IPCDD49 pKa = 3.42YY50 pKa = 10.45TRR52 pKa = 11.84EE53 pKa = 3.94QIMQGLHH60 pKa = 6.9ASDD63 pKa = 5.01DD64 pKa = 3.81QDD66 pKa = 5.21GDD68 pKa = 3.71LTDD71 pKa = 3.77QIVVGSISRR80 pKa = 11.84FIEE83 pKa = 4.29KK84 pKa = 10.2GLCDD88 pKa = 3.18VTYY91 pKa = 10.26TVFDD95 pKa = 4.06SSNQSASLTRR105 pKa = 11.84RR106 pKa = 11.84IRR108 pKa = 11.84FTDD111 pKa = 3.35YY112 pKa = 10.59QSPVFQLSAPLVFEE126 pKa = 4.48EE127 pKa = 5.19GAMSSMSILDD137 pKa = 4.17LFTAYY142 pKa = 10.28DD143 pKa = 3.92VLDD146 pKa = 3.66QDD148 pKa = 3.33ITDD151 pKa = 4.7NIMQVDD157 pKa = 3.54SDD159 pKa = 4.28VNYY162 pKa = 10.45SSQGRR167 pKa = 11.84YY168 pKa = 9.68EE169 pKa = 3.72ITLEE173 pKa = 4.06VNNTKK178 pKa = 10.69GDD180 pKa = 3.69TATLSLPVYY189 pKa = 9.95ILPEE193 pKa = 4.31DD194 pKa = 3.88SVNCSITLSDD204 pKa = 3.67YY205 pKa = 11.19LVYY208 pKa = 11.06LNVGDD213 pKa = 4.54GFDD216 pKa = 3.47PSGYY220 pKa = 9.11IQSAMDD226 pKa = 4.29DD227 pKa = 4.05DD228 pKa = 5.22GNNLDD233 pKa = 4.0VSQLQITSNVDD244 pKa = 2.87TSKK247 pKa = 11.05AGTYY251 pKa = 7.11EE252 pKa = 4.01VCFDD256 pKa = 4.34PTPLGYY262 pKa = 10.44SGVVYY267 pKa = 7.22MTVVVRR273 pKa = 4.78

Molecular weight: 30.19 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A380LN09|A0A380LN09_9FIRM Uncharacterized protein OS=Faecalicoccus pleomorphus OX=1323 GN=NCTC11087_01559 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 10.14QPSKK9 pKa = 10.05RR10 pKa = 11.84KK11 pKa = 8.47HH12 pKa = 5.31QKK14 pKa = 6.82THH16 pKa = 4.76GFRR19 pKa = 11.84ARR21 pKa = 11.84MATVGGRR28 pKa = 11.84NVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.94GRR39 pKa = 11.84KK40 pKa = 8.67VLSAA44 pKa = 4.05

Molecular weight: 5.09 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1976

0

1976

605430

30

2481

306.4

34.65

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.501 ± 0.049

1.572 ± 0.027

5.832 ± 0.054

6.999 ± 0.048

4.366 ± 0.044

6.243 ± 0.055

2.2 ± 0.034

7.81 ± 0.059

7.27 ± 0.049

9.426 ± 0.074

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.073 ± 0.031

4.39 ± 0.037

3.245 ± 0.029

4.366 ± 0.044

3.76 ± 0.044

5.971 ± 0.038

5.301 ± 0.058

6.668 ± 0.048

0.889 ± 0.016

4.117 ± 0.038
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski