Cyanophage 9515-10a

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Tangaroavirus; Prochlorococcus virus 951510a

Average proteome isoelectric point is 6.32

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 55 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E3SMG9|E3SMG9_9CAUD Photosystem II reaction center protein PsbA/D1 OS=Cyanophage 9515-10a OX=444875 GN=CYOG_00043 PE=3 SV=1
MM1 pKa = 7.43KK2 pKa = 10.35KK3 pKa = 9.65IALALAASIASTPAMAGPYY22 pKa = 10.58VNVEE26 pKa = 3.99TNADD30 pKa = 3.79YY31 pKa = 10.66TGSDD35 pKa = 3.56YY36 pKa = 11.17TSRR39 pKa = 11.84ATDD42 pKa = 2.97LHH44 pKa = 7.68IGYY47 pKa = 9.8EE48 pKa = 4.09NEE50 pKa = 4.27LGSLAYY56 pKa = 9.89YY57 pKa = 9.15VQGGKK62 pKa = 8.35TINAADD68 pKa = 4.03GVDD71 pKa = 3.72SEE73 pKa = 5.85SNFSGKK79 pKa = 10.31LGASVSATDD88 pKa = 3.6KK89 pKa = 10.92LGLYY93 pKa = 10.47GEE95 pKa = 4.47VSFAQVEE102 pKa = 4.44DD103 pKa = 3.74ADD105 pKa = 3.87NTYY108 pKa = 8.69GTKK111 pKa = 10.52LGAKK115 pKa = 9.94YY116 pKa = 10.77SFF118 pKa = 4.04

Molecular weight: 12.28 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E3SME8|E3SME8_9CAUD Predicted protein OS=Cyanophage 9515-10a OX=444875 GN=CYOG_00022 PE=4 SV=1
MM1 pKa = 7.64APKK4 pKa = 10.13KK5 pKa = 10.88LPVSKK10 pKa = 10.41LKK12 pKa = 10.74KK13 pKa = 8.7SARR16 pKa = 11.84NYY18 pKa = 10.25RR19 pKa = 11.84KK20 pKa = 10.03NPLSRR25 pKa = 11.84AKK27 pKa = 10.37KK28 pKa = 9.54NAAQRR33 pKa = 11.84SRR35 pKa = 11.84NKK37 pKa = 10.57LKK39 pKa = 10.55INKK42 pKa = 9.45KK43 pKa = 9.85YY44 pKa = 10.12RR45 pKa = 11.84AEE47 pKa = 3.92LNRR50 pKa = 11.84ARR52 pKa = 11.84RR53 pKa = 11.84KK54 pKa = 10.11DD55 pKa = 3.4GNYY58 pKa = 10.37GKK60 pKa = 10.66GGKK63 pKa = 9.68DD64 pKa = 3.2YY65 pKa = 11.44SHH67 pKa = 7.1TKK69 pKa = 10.04RR70 pKa = 11.84GTLVRR75 pKa = 11.84EE76 pKa = 4.14DD77 pKa = 3.41ASKK80 pKa = 10.82NRR82 pKa = 11.84ARR84 pKa = 11.84NRR86 pKa = 11.84SKK88 pKa = 10.92KK89 pKa = 10.27

Molecular weight: 10.34 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

55

0

55

14385

43

1708

261.5

29.0

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.648 ± 0.349

0.938 ± 0.195

6.597 ± 0.28

6.069 ± 0.375

3.545 ± 0.16

7.251 ± 0.599

1.696 ± 0.145

5.29 ± 0.172

6.535 ± 0.508

7.897 ± 0.338

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.377 ± 0.256

5.499 ± 0.379

4.004 ± 0.424

4.046 ± 0.329

4.463 ± 0.352

6.813 ± 0.452

6.986 ± 0.563

6.222 ± 0.292

1.369 ± 0.165

3.754 ± 0.236
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski