Acinetobacter sp.

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; unclassified Acinetobacter

Average proteome isoelectric point is 6.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3709 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A519JEX7|A0A519JEX7_ACISP Pyridoxal phosphate homeostasis protein OS=Acinetobacter sp. OX=472 GN=EON51_03365 PE=3 SV=1
MM1 pKa = 7.48LKK3 pKa = 10.41KK4 pKa = 10.06IALATALIASLGTAHH19 pKa = 8.12AYY21 pKa = 7.95QAEE24 pKa = 4.41VGGTIALVDD33 pKa = 4.34PDD35 pKa = 4.66NGDD38 pKa = 3.19TSTGFGIDD46 pKa = 2.85ATYY49 pKa = 11.22YY50 pKa = 10.13FDD52 pKa = 5.41SVRR55 pKa = 11.84LKK57 pKa = 10.58NDD59 pKa = 3.68PYY61 pKa = 11.63NEE63 pKa = 3.9AAFLNRR69 pKa = 11.84ASNLNAAFSYY79 pKa = 10.55IDD81 pKa = 3.49YY82 pKa = 10.9DD83 pKa = 3.85LYY85 pKa = 11.64EE86 pKa = 4.31NTTFNAGIEE95 pKa = 4.26YY96 pKa = 9.24FVPNSDD102 pKa = 4.23FYY104 pKa = 11.11ISGSLGQVSEE114 pKa = 4.21EE115 pKa = 4.33TEE117 pKa = 4.05GFEE120 pKa = 6.02DD121 pKa = 5.87FDD123 pKa = 3.96TTLYY127 pKa = 10.78AAEE130 pKa = 4.85LGYY133 pKa = 11.01LPIPGLLLAVGLAGYY148 pKa = 10.87DD149 pKa = 3.4NDD151 pKa = 5.12RR152 pKa = 11.84DD153 pKa = 4.16DD154 pKa = 5.84GVDD157 pKa = 3.11PTLRR161 pKa = 11.84AKK163 pKa = 10.45YY164 pKa = 6.91VTRR167 pKa = 11.84VGQYY171 pKa = 11.34DD172 pKa = 3.65MNFEE176 pKa = 4.38AGANFGDD183 pKa = 4.0LDD185 pKa = 4.62AYY187 pKa = 9.77TLGTDD192 pKa = 4.46LYY194 pKa = 11.2LDD196 pKa = 3.61NTFSAGLGFADD207 pKa = 3.32SDD209 pKa = 3.89VRR211 pKa = 11.84NSDD214 pKa = 3.29VFTIRR219 pKa = 11.84AKK221 pKa = 10.69KK222 pKa = 9.98FLNQQVSLEE231 pKa = 3.95GSINFADD238 pKa = 4.03AGNIFALRR246 pKa = 11.84GAYY249 pKa = 9.69RR250 pKa = 11.84FF251 pKa = 3.75

Molecular weight: 27.29 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2D7VG37|A0A2D7VG37_ACISP 50S ribosomal protein L28 OS=Acinetobacter sp. OX=472 GN=rpmB PE=3 SV=1
MM1 pKa = 7.45KK2 pKa = 9.55RR3 pKa = 11.84TFQPSEE9 pKa = 3.97LKK11 pKa = 10.13RR12 pKa = 11.84KK13 pKa = 8.98RR14 pKa = 11.84VHH16 pKa = 6.36GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.4AGRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.18GRR39 pKa = 11.84HH40 pKa = 5.1SLTVV44 pKa = 3.06

Molecular weight: 5.18 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3709

0

3709

1144572

25

2004

308.6

34.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.474 ± 0.047

0.908 ± 0.014

5.153 ± 0.035

5.828 ± 0.044

4.465 ± 0.033

6.62 ± 0.043

2.191 ± 0.023

6.988 ± 0.037

6.098 ± 0.036

10.197 ± 0.047

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.502 ± 0.022

4.813 ± 0.033

3.903 ± 0.026

4.997 ± 0.042

4.12 ± 0.033

6.136 ± 0.032

5.391 ± 0.033

6.556 ± 0.034

1.235 ± 0.016

3.424 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski