Adhaeribacter aerolatus

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Cytophagia; Cytophagales; Hymenobacteraceae; Adhaeribacter

Average proteome isoelectric point is 6.86

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5168 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A512AST3|A0A512AST3_9BACT PINc domain-containing protein OS=Adhaeribacter aerolatus OX=670289 GN=AAE02nite_04370 PE=4 SV=1
MM1 pKa = 7.7NDD3 pKa = 2.49IKK5 pKa = 10.79IYY7 pKa = 8.94VQEE10 pKa = 4.1PSGDD14 pKa = 3.68KK15 pKa = 10.7TPVDD19 pKa = 4.01APTDD23 pKa = 3.47MGLSLMEE30 pKa = 3.91VLKK33 pKa = 11.16ASGYY37 pKa = 9.79PIAATCGGMALCATCHH53 pKa = 6.23IEE55 pKa = 4.03VLSDD59 pKa = 3.71HH60 pKa = 6.62EE61 pKa = 5.05LPPPSDD67 pKa = 3.78DD68 pKa = 3.3EE69 pKa = 6.34GYY71 pKa = 9.69MLDD74 pKa = 4.03SLPAVTDD81 pKa = 3.55NSRR84 pKa = 11.84LSCQVRR90 pKa = 11.84LTPEE94 pKa = 3.99LDD96 pKa = 3.46EE97 pKa = 5.34LVVKK101 pKa = 10.75LGAGDD106 pKa = 3.45

Molecular weight: 11.25 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A512AZT9|A0A512AZT9_9BACT Uncharacterized protein OS=Adhaeribacter aerolatus OX=670289 GN=AAE02nite_28950 PE=4 SV=1
MM1 pKa = 7.41KK2 pKa = 10.34KK3 pKa = 10.23IIATLGVAFIFSTVQAQTTKK23 pKa = 10.59SVPAQTRR30 pKa = 11.84PEE32 pKa = 4.2KK33 pKa = 10.34NNHH36 pKa = 4.58GTVVSTAAHH45 pKa = 3.94QTYY48 pKa = 8.86PQSEE52 pKa = 4.16KK53 pKa = 10.87GKK55 pKa = 9.55FISRR59 pKa = 11.84IARR62 pKa = 11.84SKK64 pKa = 10.66SRR66 pKa = 11.84IVGAKK71 pKa = 9.03KK72 pKa = 10.22QPTVNPKK79 pKa = 10.08KK80 pKa = 10.64LSTSKK85 pKa = 10.26PQNPKK90 pKa = 10.92AKK92 pKa = 9.41GLQINRR98 pKa = 11.84PARR101 pKa = 11.84PVPAQRR107 pKa = 11.84RR108 pKa = 11.84ILVQRR113 pKa = 11.84PTSKK117 pKa = 10.55GQSVRR122 pKa = 11.84LNRR125 pKa = 11.84PNPVRR130 pKa = 11.84RR131 pKa = 11.84PVGNGRR137 pKa = 11.84FTQVGRR143 pKa = 11.84GG144 pKa = 3.37

Molecular weight: 15.79 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5168

0

5168

1833445

44

2721

354.8

39.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.165 ± 0.032

0.698 ± 0.011

4.874 ± 0.023

5.854 ± 0.035

4.678 ± 0.024

7.026 ± 0.037

1.866 ± 0.015

6.479 ± 0.032

6.252 ± 0.033

9.964 ± 0.039

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.077 ± 0.017

5.527 ± 0.033

4.418 ± 0.022

4.361 ± 0.027

4.414 ± 0.026

5.692 ± 0.026

5.982 ± 0.038

6.431 ± 0.023

1.241 ± 0.014

4.001 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski