Human feces pecovirus

Taxonomy: Viruses; unclassified viruses

Average proteome isoelectric point is 8.14

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A142J7H6|A0A142J7H6_9VIRU Replication associated protein OS=Human feces pecovirus OX=1820160 PE=4 SV=1
MM1 pKa = 8.1SMRR4 pKa = 11.84TRR6 pKa = 11.84NWCVTSWTCPDD17 pKa = 3.48YY18 pKa = 11.54DD19 pKa = 3.69SVEE22 pKa = 4.1RR23 pKa = 11.84LVVSGEE29 pKa = 3.88YY30 pKa = 10.34KK31 pKa = 9.82YY32 pKa = 11.36VCVGKK37 pKa = 7.87EE38 pKa = 3.72TCPRR42 pKa = 11.84TGKK45 pKa = 8.4VHH47 pKa = 4.87WHH49 pKa = 6.83WYY51 pKa = 7.75LQAVNKK57 pKa = 10.5KK58 pKa = 8.55SMRR61 pKa = 11.84QIKK64 pKa = 10.17KK65 pKa = 10.46DD66 pKa = 3.21VGDD69 pKa = 4.03RR70 pKa = 11.84MAHH73 pKa = 6.13AEE75 pKa = 4.09AANGPADD82 pKa = 3.98AGIAYY87 pKa = 9.08VKK89 pKa = 10.61KK90 pKa = 10.5DD91 pKa = 3.85GEE93 pKa = 4.18WKK95 pKa = 10.18EE96 pKa = 3.61WGEE99 pKa = 3.88PKK101 pKa = 10.26KK102 pKa = 10.53QGRR105 pKa = 11.84RR106 pKa = 11.84SDD108 pKa = 5.02LEE110 pKa = 4.14DD111 pKa = 3.49CKK113 pKa = 11.07KK114 pKa = 10.79IIDD117 pKa = 4.05NSVDD121 pKa = 3.46DD122 pKa = 5.64AMGTMQQIADD132 pKa = 3.6THH134 pKa = 6.26FGDD137 pKa = 4.54FVRR140 pKa = 11.84YY141 pKa = 8.38YY142 pKa = 10.81RR143 pKa = 11.84GFAKK147 pKa = 10.45YY148 pKa = 11.04ADD150 pKa = 3.54MVDD153 pKa = 3.2IKK155 pKa = 10.43RR156 pKa = 11.84AKK158 pKa = 9.3QRR160 pKa = 11.84EE161 pKa = 3.95PHH163 pKa = 5.31MPEE166 pKa = 3.66VIVYY170 pKa = 9.46LGRR173 pKa = 11.84AGSGKK178 pKa = 10.23SYY180 pKa = 10.44HH181 pKa = 6.94CYY183 pKa = 9.89HH184 pKa = 7.49DD185 pKa = 3.73EE186 pKa = 4.63GYY188 pKa = 10.22QRR190 pKa = 11.84SGYY193 pKa = 9.76RR194 pKa = 11.84YY195 pKa = 8.83LVQMEE200 pKa = 4.56SKK202 pKa = 9.53TYY204 pKa = 9.65FDD206 pKa = 5.07GYY208 pKa = 10.85DD209 pKa = 3.49GEE211 pKa = 4.34KK212 pKa = 10.21TIWFDD217 pKa = 3.52EE218 pKa = 4.47FSGRR222 pKa = 11.84VMSFTVFTQIVDD234 pKa = 3.28QWGSRR239 pKa = 11.84VEE241 pKa = 4.24TKK243 pKa = 10.55GGSRR247 pKa = 11.84QIFPEE252 pKa = 4.1RR253 pKa = 11.84FLISTVEE260 pKa = 4.2WPSQWWAGSSRR271 pKa = 11.84FNADD275 pKa = 2.9PYY277 pKa = 10.24QLYY280 pKa = 10.41RR281 pKa = 11.84RR282 pKa = 11.84ITKK285 pKa = 9.81IYY287 pKa = 7.71WCRR290 pKa = 11.84GPGQEE295 pKa = 4.43PVEE298 pKa = 4.14LKK300 pKa = 10.62KK301 pKa = 10.96DD302 pKa = 2.85GWTCKK307 pKa = 10.78NIDD310 pKa = 3.73EE311 pKa = 4.34YY312 pKa = 11.62EE313 pKa = 4.1EE314 pKa = 5.01LFGKK318 pKa = 10.62LPP320 pKa = 3.67

Molecular weight: 37.42 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A142J7H6|A0A142J7H6_9VIRU Replication associated protein OS=Human feces pecovirus OX=1820160 PE=4 SV=1
MM1 pKa = 7.12SHH3 pKa = 6.93LVSHH7 pKa = 6.82INVMARR13 pKa = 11.84RR14 pKa = 11.84YY15 pKa = 8.75RR16 pKa = 11.84RR17 pKa = 11.84RR18 pKa = 11.84RR19 pKa = 11.84FGRR22 pKa = 11.84RR23 pKa = 11.84RR24 pKa = 11.84RR25 pKa = 11.84PRR27 pKa = 11.84RR28 pKa = 11.84YY29 pKa = 9.0LRR31 pKa = 11.84RR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84ALLRR38 pKa = 11.84RR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84LLRR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84GGRR51 pKa = 11.84RR52 pKa = 11.84FTVSVQRR59 pKa = 11.84DD60 pKa = 3.58FALIAASRR68 pKa = 11.84VPEE71 pKa = 4.05ATQLAGNGTNVAGPGGVVGIDD92 pKa = 2.95TGGFRR97 pKa = 11.84SYY99 pKa = 11.36SVLALPPDD107 pKa = 3.95WIEE110 pKa = 3.82RR111 pKa = 11.84TVGDD115 pKa = 3.64TRR117 pKa = 11.84LVGNQWDD124 pKa = 3.75VSNKK128 pKa = 9.57YY129 pKa = 9.05LQRR132 pKa = 11.84CIGVGTGEE140 pKa = 4.27SGMLTDD146 pKa = 5.27LPQIIWSKK154 pKa = 9.66PLPVNFNCGSLWDD167 pKa = 3.74LCEE170 pKa = 4.08EE171 pKa = 4.54YY172 pKa = 10.5RR173 pKa = 11.84IAWIALSFTVAEE185 pKa = 4.42SQTKK189 pKa = 9.42NNRR192 pKa = 11.84HH193 pKa = 6.43LYY195 pKa = 10.49LEE197 pKa = 4.33WTNLPSAKK205 pKa = 10.19APQWTDD211 pKa = 2.63LDD213 pKa = 4.29GMVLPEE219 pKa = 4.98GYY221 pKa = 10.5AGGGTNVDD229 pKa = 3.4TNGFNWLCRR238 pKa = 11.84PIDD241 pKa = 3.47IALACSPSGRR251 pKa = 11.84QSKK254 pKa = 10.44LNGWHH259 pKa = 7.06RR260 pKa = 11.84SILSYY265 pKa = 7.76THH267 pKa = 7.09PVTIRR272 pKa = 11.84YY273 pKa = 8.46RR274 pKa = 11.84PRR276 pKa = 11.84HH277 pKa = 5.85ADD279 pKa = 3.08MTIDD283 pKa = 3.83NNPDD287 pKa = 3.19VAPDD291 pKa = 3.52SSNQNKK297 pKa = 9.65PKK299 pKa = 10.04MIYY302 pKa = 9.88SDD304 pKa = 3.61NFSEE308 pKa = 4.62SGRR311 pKa = 11.84LTRR314 pKa = 11.84GYY316 pKa = 10.74LPVAQASVLLTEE328 pKa = 4.42QCWFGPCIRR337 pKa = 11.84VVDD340 pKa = 4.07ADD342 pKa = 3.9KK343 pKa = 10.91TPQLGTNEE351 pKa = 3.76QAFNSFYY358 pKa = 10.86DD359 pKa = 3.73EE360 pKa = 4.1YY361 pKa = 11.35GIRR364 pKa = 11.84CSMTAVLRR372 pKa = 11.84MRR374 pKa = 11.84AKK376 pKa = 9.26TCNDD380 pKa = 3.14PVFPYY385 pKa = 9.41YY386 pKa = 9.79TVHH389 pKa = 7.07

Molecular weight: 44.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

709

320

389

354.5

40.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.783 ± 0.516

2.398 ± 0.067

6.065 ± 0.739

4.795 ± 1.37

3.385 ± 0.24

8.322 ± 0.282

1.975 ± 0.14

4.372 ± 0.002

4.937 ± 2.1

6.065 ± 1.936

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.539 ± 0.386

3.949 ± 1.366

4.937 ± 0.782

3.808 ± 0.373

9.873 ± 1.769

6.347 ± 0.27

5.501 ± 0.536

6.77 ± 0.069

3.244 ± 0.539

4.937 ± 0.865
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski