Arrabida virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; unclassified Phlebovirus

Average proteome isoelectric point is 8.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A125QXV5|A0A125QXV5_9VIRU Nucleocapsid protein OS=Arrabida virus OX=1457322 GN=NP PE=3 SV=1
MM1 pKa = 7.54FYY3 pKa = 11.2AKK5 pKa = 10.37FILLLCFVQGALLKK19 pKa = 8.9YY20 pKa = 8.87TIISKK25 pKa = 10.39VGSSTYY31 pKa = 10.67KK32 pKa = 10.08RR33 pKa = 11.84VCLSHH38 pKa = 6.2TTDD41 pKa = 5.1LDD43 pKa = 3.68TLLDD47 pKa = 3.57MTSRR51 pKa = 11.84EE52 pKa = 3.86MSNIKK57 pKa = 8.91LTGGSCSLGDD67 pKa = 3.89LTKK70 pKa = 10.16PDD72 pKa = 4.14CSPDD76 pKa = 3.23FFSNYY81 pKa = 7.52VANIQSSNTKK91 pKa = 8.5ITGKK95 pKa = 9.69FQDD98 pKa = 3.64IIGEE102 pKa = 4.16RR103 pKa = 11.84EE104 pKa = 3.89MEE106 pKa = 4.23VTNDD110 pKa = 3.4VVPDD114 pKa = 3.66SFGPGPHH121 pKa = 7.13DD122 pKa = 4.02CVSFDD127 pKa = 5.38KK128 pKa = 11.2KK129 pKa = 10.78PFWSDD134 pKa = 3.34LLPTSVSKK142 pKa = 11.09EE143 pKa = 3.85EE144 pKa = 4.02PKK146 pKa = 10.64PIISTLSVLPAAPPIKK162 pKa = 10.33DD163 pKa = 3.66FSHH166 pKa = 6.34KK167 pKa = 10.33VVEE170 pKa = 4.18AEE172 pKa = 4.08EE173 pKa = 4.09MVKK176 pKa = 10.39EE177 pKa = 4.23IEE179 pKa = 4.21GEE181 pKa = 4.01LMKK184 pKa = 10.84EE185 pKa = 4.14KK186 pKa = 10.35EE187 pKa = 4.06RR188 pKa = 11.84NSAKK192 pKa = 10.41EE193 pKa = 3.58EE194 pKa = 3.81EE195 pKa = 4.27ARR197 pKa = 11.84QRR199 pKa = 11.84MRR201 pKa = 11.84EE202 pKa = 4.1LEE204 pKa = 4.51DD205 pKa = 4.23DD206 pKa = 5.18LRR208 pKa = 11.84KK209 pKa = 9.6QWAAEE214 pKa = 3.9RR215 pKa = 11.84MAKK218 pKa = 10.28QNMSSVLEE226 pKa = 4.06RR227 pKa = 11.84EE228 pKa = 4.18RR229 pKa = 11.84QEE231 pKa = 4.04KK232 pKa = 10.15QSLEE236 pKa = 3.95RR237 pKa = 11.84RR238 pKa = 11.84MHH240 pKa = 6.13EE241 pKa = 3.67VDD243 pKa = 2.96KK244 pKa = 10.96KK245 pKa = 11.0LRR247 pKa = 11.84ASEE250 pKa = 4.82DD251 pKa = 3.21RR252 pKa = 11.84AQKK255 pKa = 8.44YY256 pKa = 7.12QEE258 pKa = 3.97RR259 pKa = 11.84AEE261 pKa = 4.12QAEE264 pKa = 4.34KK265 pKa = 10.77SHH267 pKa = 6.52SKK269 pKa = 10.45LLSRR273 pKa = 11.84SGAATTMATVVFTSLLASGLAVVTEE298 pKa = 4.05LEE300 pKa = 4.41KK301 pKa = 10.72RR302 pKa = 11.84DD303 pKa = 3.93TNHH306 pKa = 7.15LLNRR310 pKa = 11.84PGNGVYY316 pKa = 8.88MANADD321 pKa = 3.79SLIQTEE327 pKa = 4.2CTLNYY332 pKa = 9.91GQRR335 pKa = 11.84CLAWEE340 pKa = 4.04LQITPVRR347 pKa = 11.84YY348 pKa = 8.79PFFTSNVDD356 pKa = 3.13KK357 pKa = 11.34YY358 pKa = 11.59SLLEE362 pKa = 4.72SITEE366 pKa = 4.12TPSILEE372 pKa = 4.44KK373 pKa = 11.15NNEE376 pKa = 4.06SCQLATTSGSLKK388 pKa = 9.16TCAKK392 pKa = 9.09EE393 pKa = 3.26ASTIKK398 pKa = 10.23KK399 pKa = 9.56HH400 pKa = 5.78CTDD403 pKa = 3.49DD404 pKa = 3.19VRR406 pKa = 11.84AFFFINSVGKK416 pKa = 8.52LTIVRR421 pKa = 11.84CADD424 pKa = 3.2NHH426 pKa = 6.6ILSEE430 pKa = 4.33DD431 pKa = 3.8CNFCISKK438 pKa = 10.37ARR440 pKa = 11.84NSNQNMFMPVQDD452 pKa = 4.98AFCQRR457 pKa = 11.84QGSDD461 pKa = 2.95TAPAIRR467 pKa = 11.84YY468 pKa = 9.34SKK470 pKa = 10.12DD471 pKa = 2.7ICSIGAIKK479 pKa = 10.29IKK481 pKa = 9.94QCHH484 pKa = 5.83KK485 pKa = 9.42ATSKK489 pKa = 10.16FEE491 pKa = 4.07RR492 pKa = 11.84MGFISVGQKK501 pKa = 10.14KK502 pKa = 10.43LYY504 pKa = 10.14IEE506 pKa = 4.12EE507 pKa = 4.02LKK509 pKa = 10.77LRR511 pKa = 11.84YY512 pKa = 9.03RR513 pKa = 11.84QEE515 pKa = 3.83YY516 pKa = 10.96DD517 pKa = 3.09PDD519 pKa = 3.2QFMCYY524 pKa = 9.48KK525 pKa = 9.82IKK527 pKa = 10.71SSSPLKK533 pKa = 10.06YY534 pKa = 10.31EE535 pKa = 3.88KK536 pKa = 10.79VSSKK540 pKa = 10.34KK541 pKa = 10.4CKK543 pKa = 10.16EE544 pKa = 3.56VDD546 pKa = 2.77TGGNQKK552 pKa = 10.42CSGDD556 pKa = 3.3EE557 pKa = 4.21HH558 pKa = 6.41FCNRR562 pKa = 11.84YY563 pKa = 8.97PCDD566 pKa = 3.3TANPEE571 pKa = 4.1AHH573 pKa = 6.8CLTRR577 pKa = 11.84KK578 pKa = 9.84HH579 pKa = 5.85SAIAEE584 pKa = 4.18VNIGGVWIRR593 pKa = 11.84PKK595 pKa = 10.41CVGYY599 pKa = 11.04EE600 pKa = 3.78MVLVKK605 pKa = 10.54RR606 pKa = 11.84SGLKK610 pKa = 10.27SEE612 pKa = 4.73DD613 pKa = 3.45LSIRR617 pKa = 11.84DD618 pKa = 4.18CPSCLWEE625 pKa = 4.4CKK627 pKa = 9.71KK628 pKa = 11.02SRR630 pKa = 11.84ITIKK634 pKa = 8.91THH636 pKa = 4.71GPKK639 pKa = 9.62IVSATACSHH648 pKa = 6.42GSCKK652 pKa = 10.54SVMQKK657 pKa = 10.4PSTFVEE663 pKa = 3.97IPYY666 pKa = 9.59PGNSEE671 pKa = 4.55IIGGDD676 pKa = 2.71IGVHH680 pKa = 3.87MTEE683 pKa = 4.64RR684 pKa = 11.84GSPSNIHH691 pKa = 5.98VRR693 pKa = 11.84THH695 pKa = 6.23CPPRR699 pKa = 11.84DD700 pKa = 3.54SCDD703 pKa = 3.33VSDD706 pKa = 6.22CMFCVHH712 pKa = 7.5GILNYY717 pKa = 9.83QCHH720 pKa = 5.56TLASALTIATIVSAVLVVVYY740 pKa = 9.02FLLARR745 pKa = 11.84SKK747 pKa = 10.67RR748 pKa = 11.84AVKK751 pKa = 10.28FITSLLIVPFKK762 pKa = 10.45WLTLLSIWVVKK773 pKa = 8.77NWKK776 pKa = 10.0RR777 pKa = 11.84KK778 pKa = 6.2MSKK781 pKa = 10.21LARR784 pKa = 11.84ATNNAIGWDD793 pKa = 3.44QDD795 pKa = 3.74VEE797 pKa = 4.41RR798 pKa = 11.84GRR800 pKa = 11.84PRR802 pKa = 11.84AAAGHH807 pKa = 5.2QNQVARR813 pKa = 11.84YY814 pKa = 6.34TFYY817 pKa = 11.27GATILSLMTSGLCCTEE833 pKa = 3.99SVIAEE838 pKa = 4.24SNIMQCTTSDD848 pKa = 3.23STTTCKK854 pKa = 10.76ASGTIILRR862 pKa = 11.84LGPIGSEE869 pKa = 3.66SCLILKK875 pKa = 8.76GLRR878 pKa = 11.84DD879 pKa = 3.66SEE881 pKa = 4.34KK882 pKa = 9.99QFISIRR888 pKa = 11.84TVSSEE893 pKa = 3.93LTCRR897 pKa = 11.84EE898 pKa = 3.82GDD900 pKa = 4.01SFWTSLYY907 pKa = 10.6TPICLSSRR915 pKa = 11.84RR916 pKa = 11.84CHH918 pKa = 7.36LMGEE922 pKa = 4.53CTGDD926 pKa = 4.18NCLKK930 pKa = 10.07WQDD933 pKa = 3.69NKK935 pKa = 10.62TSSEE939 pKa = 4.17FTGRR943 pKa = 11.84THH945 pKa = 8.41SEE947 pKa = 3.71VLHH950 pKa = 5.89EE951 pKa = 4.49NKK953 pKa = 10.16CFEE956 pKa = 3.93QSGGIGYY963 pKa = 9.83GCFNVNPSCLMVHH976 pKa = 6.67SYY978 pKa = 10.96LKK980 pKa = 10.27PIYY983 pKa = 10.18KK984 pKa = 10.13NAFKK988 pKa = 10.91VFRR991 pKa = 11.84CVAWNHH997 pKa = 4.89RR998 pKa = 11.84VKK1000 pKa = 10.88LAITTHH1006 pKa = 6.09KK1007 pKa = 10.65KK1008 pKa = 10.6SFDD1011 pKa = 3.55VTLMAMSTQPTDD1023 pKa = 2.68WGSIGLILDD1032 pKa = 3.72SEE1034 pKa = 5.38GITGTNSYY1042 pKa = 11.42SFMKK1046 pKa = 10.65YY1047 pKa = 10.13GVGSFAIIDD1056 pKa = 3.82EE1057 pKa = 4.58PFSIEE1062 pKa = 3.8PRR1064 pKa = 11.84KK1065 pKa = 10.54GFLGEE1070 pKa = 4.13VRR1072 pKa = 11.84CPTEE1076 pKa = 3.66EE1077 pKa = 4.14TAVKK1081 pKa = 10.43ASPSCKK1087 pKa = 9.63AAPQIIEE1094 pKa = 4.1YY1095 pKa = 9.21HH1096 pKa = 6.52PEE1098 pKa = 3.71MDD1100 pKa = 3.25TVEE1103 pKa = 5.38CITNMMDD1110 pKa = 3.78PMAIFNRR1117 pKa = 11.84GSLPQVRR1124 pKa = 11.84DD1125 pKa = 3.23GVTFAQSIEE1134 pKa = 4.3KK1135 pKa = 10.69NSVQALTTGEE1145 pKa = 3.85IKK1147 pKa = 10.77ASVRR1151 pKa = 11.84LVLDD1155 pKa = 4.4DD1156 pKa = 4.57YY1157 pKa = 10.99EE1158 pKa = 4.65VEE1160 pKa = 4.45YY1161 pKa = 10.77KK1162 pKa = 10.83VSEE1165 pKa = 4.12NDD1167 pKa = 3.62CDD1169 pKa = 3.75STFINITGCYY1179 pKa = 9.56SCDD1182 pKa = 2.99EE1183 pKa = 4.23GARR1186 pKa = 11.84LCVRR1190 pKa = 11.84IRR1192 pKa = 11.84TLGDD1196 pKa = 3.47SIYY1199 pKa = 10.62HH1200 pKa = 5.27FTDD1203 pKa = 3.23SEE1205 pKa = 4.44DD1206 pKa = 3.42MMNVMFKK1213 pKa = 10.76VNSSVTEE1220 pKa = 4.07YY1221 pKa = 10.17CTVLHH1226 pKa = 6.48FSKK1229 pKa = 10.47PVVNFEE1235 pKa = 4.03GKK1237 pKa = 9.74YY1238 pKa = 10.5DD1239 pKa = 3.69CGKK1242 pKa = 10.08SRR1244 pKa = 11.84KK1245 pKa = 9.19PMIIKK1250 pKa = 8.61GTLIAMAPHH1259 pKa = 7.86DD1260 pKa = 4.63DD1261 pKa = 3.84RR1262 pKa = 11.84VHH1264 pKa = 6.88SGGSSIVVNPKK1275 pKa = 10.39SKK1277 pKa = 10.72GVDD1280 pKa = 3.82FLGWLSGLSSWLGGPLKK1297 pKa = 10.05TVLTVLGFLILGLVFVIVVIFLVRR1321 pKa = 11.84VGIRR1325 pKa = 11.84QALLKK1330 pKa = 10.58KK1331 pKa = 10.0MKK1333 pKa = 10.4

Molecular weight:
148.69 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A0X9U9D7|A0A0X9U9D7_9VIRU Glycoprotein OS=Arrabida virus OX=1457322 GN=GP PE=4 SV=1
MM1 pKa = 7.66LSRR4 pKa = 11.84VVYY7 pKa = 9.9LRR9 pKa = 11.84KK10 pKa = 9.73RR11 pKa = 11.84SSDD14 pKa = 3.14RR15 pKa = 11.84KK16 pKa = 10.09KK17 pKa = 11.0GRR19 pKa = 11.84LQKK22 pKa = 10.67RR23 pKa = 11.84FFVDD27 pKa = 3.15SFLNEE32 pKa = 3.59AALFGPFSLAGGEE45 pKa = 4.49VPFTVYY51 pKa = 10.59KK52 pKa = 10.53NSVVFDD58 pKa = 3.55SRR60 pKa = 11.84PTLNHH65 pKa = 5.81YY66 pKa = 9.76LIKK69 pKa = 10.96NEE71 pKa = 4.05FPAILSGEE79 pKa = 4.38MINLPSTTLYY89 pKa = 10.54NPIMRR94 pKa = 11.84EE95 pKa = 4.07LYY97 pKa = 10.09QEE99 pKa = 4.87SIHH102 pKa = 6.47QIKK105 pKa = 10.39RR106 pKa = 11.84SNRR109 pKa = 11.84DD110 pKa = 3.3YY111 pKa = 11.17LVSALRR117 pKa = 11.84WPTGLASLEE126 pKa = 4.49FIDD129 pKa = 6.96FYY131 pKa = 11.58FEE133 pKa = 5.09DD134 pKa = 5.5FIFLSVTDD142 pKa = 4.31SYY144 pKa = 11.56ATNKK148 pKa = 9.8LLKK151 pKa = 10.51LLMKK155 pKa = 10.86ASGDD159 pKa = 3.55QSCDD163 pKa = 2.65IEE165 pKa = 4.35KK166 pKa = 10.22QIKK169 pKa = 9.42IIYY172 pKa = 9.71RR173 pKa = 11.84KK174 pKa = 9.55ILLEE178 pKa = 4.04GSKK181 pKa = 10.71FGMNCYY187 pKa = 9.91HH188 pKa = 6.64LTGADD193 pKa = 3.98IIRR196 pKa = 11.84DD197 pKa = 3.25ICIIQSARR205 pKa = 11.84VARR208 pKa = 11.84LAQKK212 pKa = 6.86TQKK215 pKa = 10.43SPSRR219 pKa = 11.84DD220 pKa = 3.52VVRR223 pKa = 11.84MIYY226 pKa = 10.24QSLSPNDD233 pKa = 4.0LLVSPKK239 pKa = 10.18HH240 pKa = 6.3SGVSTEE246 pKa = 3.97APKK249 pKa = 10.32LAEE252 pKa = 3.96MSAEE256 pKa = 3.79EE257 pKa = 4.09SFNYY261 pKa = 9.6FMAEE265 pKa = 3.78DD266 pKa = 3.8VEE268 pKa = 4.49FRR270 pKa = 11.84TMALSTFWTRR280 pKa = 11.84DD281 pKa = 2.77WPTAAEE287 pKa = 4.34TVASLRR293 pKa = 11.84QKK295 pKa = 10.0SRR297 pKa = 11.84RR298 pKa = 11.84RR299 pKa = 11.84VKK301 pKa = 10.2KK302 pKa = 9.39HH303 pKa = 5.79ASALPVSPDD312 pKa = 3.43YY313 pKa = 11.08PPLL316 pKa = 5.2

Molecular weight:
36.18 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

1905

256

1333

635.0

71.09

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.247 ± 1.074

3.202 ± 1.269

4.934 ± 0.185

6.089 ± 0.282

4.199 ± 0.493

5.564 ± 0.695

1.995 ± 0.445

6.247 ± 0.167

7.559 ± 0.519

8.294 ± 0.738

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.202 ± 0.651

3.832 ± 0.24

4.199 ± 0.474

2.887 ± 0.155

5.302 ± 0.634

9.291 ± 1.072

6.562 ± 0.634

6.509 ± 0.404

1.102 ± 0.049

2.782 ± 0.433

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski