Shahe narna-like virus 3

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 8.13

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KII2|A0A1L3KII2_9VIRU RNA-dependent RNA polymerase OS=Shahe narna-like virus 3 OX=1923431 PE=4 SV=1
MM1 pKa = 7.12FLKK4 pKa = 10.52RR5 pKa = 11.84SLAPVPRR12 pKa = 11.84SLIKK16 pKa = 10.4KK17 pKa = 9.94SRR19 pKa = 11.84DD20 pKa = 3.36DD21 pKa = 3.73HH22 pKa = 6.9KK23 pKa = 11.22STLTTPSEE31 pKa = 4.14RR32 pKa = 11.84VHH34 pKa = 7.26DD35 pKa = 3.98VTLKK39 pKa = 10.91FIEE42 pKa = 4.91DD43 pKa = 3.85CTTVYY48 pKa = 9.84TRR50 pKa = 11.84SLTKK54 pKa = 10.23CRR56 pKa = 11.84QEE58 pKa = 4.28RR59 pKa = 11.84LEE61 pKa = 4.67KK62 pKa = 10.27PAISPINQLKK72 pKa = 9.89RR73 pKa = 11.84LKK75 pKa = 9.34RR76 pKa = 11.84TYY78 pKa = 10.96GPIEE82 pKa = 4.06VKK84 pKa = 10.21EE85 pKa = 4.22DD86 pKa = 3.64CLISCEE92 pKa = 4.51DD93 pKa = 3.81EE94 pKa = 4.15SSHH97 pKa = 6.68RR98 pKa = 11.84QLDD101 pKa = 3.94DD102 pKa = 3.67SSLSCSEE109 pKa = 4.25TPFLNLMATKK119 pKa = 9.74EE120 pKa = 3.96LHH122 pKa = 4.86NTRR125 pKa = 11.84DD126 pKa = 3.48RR127 pKa = 11.84NQVHH131 pKa = 6.54GLHH134 pKa = 6.09SLNRR138 pKa = 11.84SFYY141 pKa = 8.8PLSYY145 pKa = 10.12KK146 pKa = 10.21IKK148 pKa = 10.65EE149 pKa = 3.79VDD151 pKa = 3.32QNLNTFDD158 pKa = 4.34NCWIDD163 pKa = 3.56QKK165 pKa = 11.35VKK167 pKa = 10.33EE168 pKa = 4.09SSYY171 pKa = 10.58YY172 pKa = 10.88DD173 pKa = 3.51KK174 pKa = 11.29LKK176 pKa = 10.99SDD178 pKa = 3.66TKK180 pKa = 10.14LTEE183 pKa = 3.88EE184 pKa = 5.15GEE186 pKa = 4.66FISQQDD192 pKa = 2.94ISMSKK197 pKa = 10.72YY198 pKa = 10.97SLDD201 pKa = 4.6KK202 pKa = 10.75INKK205 pKa = 8.76IYY207 pKa = 10.12PLSKK211 pKa = 9.92HH212 pKa = 5.91SSYY215 pKa = 11.58NNSVKK220 pKa = 10.43IGGAQSEE227 pKa = 4.45ISLNLQNSNLKK238 pKa = 10.46LGSNNGGLRR247 pKa = 11.84KK248 pKa = 9.02FAMLNNAMKK257 pKa = 10.34NQYY260 pKa = 9.8EE261 pKa = 4.09IAKK264 pKa = 9.53AKK266 pKa = 10.09CLNEE270 pKa = 3.95SKK272 pKa = 10.76DD273 pKa = 3.51IIKK276 pKa = 10.54EE277 pKa = 4.14SVRR280 pKa = 11.84VCSIVEE286 pKa = 3.84PLKK289 pKa = 10.93VRR291 pKa = 11.84TVTAEE296 pKa = 3.6EE297 pKa = 4.39ARR299 pKa = 11.84NQFIKK304 pKa = 10.59PIQKK308 pKa = 10.25LLWEE312 pKa = 5.12DD313 pKa = 3.88LLSHH317 pKa = 7.04EE318 pKa = 5.72DD319 pKa = 4.02FFLTRR324 pKa = 11.84NEE326 pKa = 4.26DD327 pKa = 5.06FEE329 pKa = 5.18SHH331 pKa = 5.4WNRR334 pKa = 11.84KK335 pKa = 7.92FKK337 pKa = 10.88FCDD340 pKa = 3.38LPYY343 pKa = 10.35HH344 pKa = 7.03ISGDD348 pKa = 3.81YY349 pKa = 10.19KK350 pKa = 11.14AATDD354 pKa = 3.66NLNRR358 pKa = 11.84NVINVVITQLSTLLPTNLIDD378 pKa = 6.1LFMKK382 pKa = 10.66NAGLHH387 pKa = 5.02YY388 pKa = 10.59LDD390 pKa = 4.29YY391 pKa = 11.62NEE393 pKa = 4.43VAFSLRR399 pKa = 11.84EE400 pKa = 4.07SPDD403 pKa = 3.47KK404 pKa = 11.18IGDD407 pKa = 3.52VYY409 pKa = 10.88LQKK412 pKa = 10.74NGQLMGSLTSFPLLCFINWISYY434 pKa = 8.03QFSKK438 pKa = 11.23YY439 pKa = 10.27LVNNYY444 pKa = 9.29PDD446 pKa = 3.34EE447 pKa = 4.59HH448 pKa = 8.31LSEE451 pKa = 4.48SCAINGDD458 pKa = 3.98DD459 pKa = 4.46IYY461 pKa = 11.4FKK463 pKa = 11.23ASLKK467 pKa = 10.71GYY469 pKa = 10.23AKK471 pKa = 8.86WQEE474 pKa = 4.17VVHH477 pKa = 6.4SFGLSPSPGKK487 pKa = 10.38NYY489 pKa = 10.39SSSNCFLINSRR500 pKa = 11.84NFLVNTKK507 pKa = 10.21SEE509 pKa = 4.18LKK511 pKa = 10.01EE512 pKa = 3.64IPFINFQMLPQYY524 pKa = 11.06SEE526 pKa = 4.15DD527 pKa = 3.67SNNKK531 pKa = 9.17FEE533 pKa = 4.84HH534 pKa = 5.93NKK536 pKa = 10.2KK537 pKa = 10.09EE538 pKa = 4.81LLNQMKK544 pKa = 10.17GDD546 pKa = 3.79SVYY549 pKa = 11.2SEE551 pKa = 4.42VNSPIGIIFRR561 pKa = 11.84TFCKK565 pKa = 9.67QANINLVKK573 pKa = 10.2PSKK576 pKa = 10.62FDD578 pKa = 3.1IQLIYY583 pKa = 10.86YY584 pKa = 8.43FYY586 pKa = 11.15SVWKK590 pKa = 10.37KK591 pKa = 10.66EE592 pKa = 3.98IIKK595 pKa = 10.28CPRR598 pKa = 11.84EE599 pKa = 3.94FYY601 pKa = 10.85LPSLIGGMGALTLDD615 pKa = 3.77EE616 pKa = 4.6FKK618 pKa = 10.27KK619 pKa = 9.61TNLLTKK625 pKa = 9.25TKK627 pKa = 10.23KK628 pKa = 10.48LSLLRR633 pKa = 11.84GFKK636 pKa = 10.39CKK638 pKa = 10.43SCFYY642 pKa = 8.95MQTYY646 pKa = 8.39EE647 pKa = 4.92QIGSDD652 pKa = 3.31KK653 pKa = 11.25DD654 pKa = 3.66QIEE657 pKa = 4.34SFAAKK662 pKa = 10.14LEE664 pKa = 4.15NIILDD669 pKa = 4.15EE670 pKa = 4.75LSGTDD675 pKa = 4.01PEE677 pKa = 4.33NKK679 pKa = 9.52QLSSKK684 pKa = 10.82SLLSPVSTFVSKK696 pKa = 11.12GGVEE700 pKa = 4.4KK701 pKa = 10.45YY702 pKa = 8.96TLQKK706 pKa = 10.53FFKK709 pKa = 10.18KK710 pKa = 10.16LGKK713 pKa = 10.12SSFRR717 pKa = 11.84NRR719 pKa = 11.84KK720 pKa = 8.4FKK722 pKa = 10.34PATVLSIEE730 pKa = 4.22KK731 pKa = 10.6SLL733 pKa = 3.9

Molecular weight: 84.36 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KII2|A0A1L3KII2_9VIRU RNA-dependent RNA polymerase OS=Shahe narna-like virus 3 OX=1923431 PE=4 SV=1
MM1 pKa = 7.12FLKK4 pKa = 10.52RR5 pKa = 11.84SLAPVPRR12 pKa = 11.84SLIKK16 pKa = 10.4KK17 pKa = 9.94SRR19 pKa = 11.84DD20 pKa = 3.36DD21 pKa = 3.73HH22 pKa = 6.9KK23 pKa = 11.22STLTTPSEE31 pKa = 4.14RR32 pKa = 11.84VHH34 pKa = 7.26DD35 pKa = 3.98VTLKK39 pKa = 10.91FIEE42 pKa = 4.91DD43 pKa = 3.85CTTVYY48 pKa = 9.84TRR50 pKa = 11.84SLTKK54 pKa = 10.23CRR56 pKa = 11.84QEE58 pKa = 4.28RR59 pKa = 11.84LEE61 pKa = 4.67KK62 pKa = 10.27PAISPINQLKK72 pKa = 9.89RR73 pKa = 11.84LKK75 pKa = 9.34RR76 pKa = 11.84TYY78 pKa = 10.96GPIEE82 pKa = 4.06VKK84 pKa = 10.21EE85 pKa = 4.22DD86 pKa = 3.64CLISCEE92 pKa = 4.51DD93 pKa = 3.81EE94 pKa = 4.15SSHH97 pKa = 6.68RR98 pKa = 11.84QLDD101 pKa = 3.94DD102 pKa = 3.67SSLSCSEE109 pKa = 4.25TPFLNLMATKK119 pKa = 9.74EE120 pKa = 3.96LHH122 pKa = 4.86NTRR125 pKa = 11.84DD126 pKa = 3.48RR127 pKa = 11.84NQVHH131 pKa = 6.54GLHH134 pKa = 6.09SLNRR138 pKa = 11.84SFYY141 pKa = 8.8PLSYY145 pKa = 10.12KK146 pKa = 10.21IKK148 pKa = 10.65EE149 pKa = 3.79VDD151 pKa = 3.32QNLNTFDD158 pKa = 4.34NCWIDD163 pKa = 3.56QKK165 pKa = 11.35VKK167 pKa = 10.33EE168 pKa = 4.09SSYY171 pKa = 10.58YY172 pKa = 10.88DD173 pKa = 3.51KK174 pKa = 11.29LKK176 pKa = 10.99SDD178 pKa = 3.66TKK180 pKa = 10.14LTEE183 pKa = 3.88EE184 pKa = 5.15GEE186 pKa = 4.66FISQQDD192 pKa = 2.94ISMSKK197 pKa = 10.72YY198 pKa = 10.97SLDD201 pKa = 4.6KK202 pKa = 10.75INKK205 pKa = 8.76IYY207 pKa = 10.12PLSKK211 pKa = 9.92HH212 pKa = 5.91SSYY215 pKa = 11.58NNSVKK220 pKa = 10.43IGGAQSEE227 pKa = 4.45ISLNLQNSNLKK238 pKa = 10.46LGSNNGGLRR247 pKa = 11.84KK248 pKa = 9.02FAMLNNAMKK257 pKa = 10.34NQYY260 pKa = 9.8EE261 pKa = 4.09IAKK264 pKa = 9.53AKK266 pKa = 10.09CLNEE270 pKa = 3.95SKK272 pKa = 10.76DD273 pKa = 3.51IIKK276 pKa = 10.54EE277 pKa = 4.14SVRR280 pKa = 11.84VCSIVEE286 pKa = 3.84PLKK289 pKa = 10.93VRR291 pKa = 11.84TVTAEE296 pKa = 3.6EE297 pKa = 4.39ARR299 pKa = 11.84NQFIKK304 pKa = 10.59PIQKK308 pKa = 10.25LLWEE312 pKa = 5.12DD313 pKa = 3.88LLSHH317 pKa = 7.04EE318 pKa = 5.72DD319 pKa = 4.02FFLTRR324 pKa = 11.84NEE326 pKa = 4.26DD327 pKa = 5.06FEE329 pKa = 5.18SHH331 pKa = 5.4WNRR334 pKa = 11.84KK335 pKa = 7.92FKK337 pKa = 10.88FCDD340 pKa = 3.38LPYY343 pKa = 10.35HH344 pKa = 7.03ISGDD348 pKa = 3.81YY349 pKa = 10.19KK350 pKa = 11.14AATDD354 pKa = 3.66NLNRR358 pKa = 11.84NVINVVITQLSTLLPTNLIDD378 pKa = 6.1LFMKK382 pKa = 10.66NAGLHH387 pKa = 5.02YY388 pKa = 10.59LDD390 pKa = 4.29YY391 pKa = 11.62NEE393 pKa = 4.43VAFSLRR399 pKa = 11.84EE400 pKa = 4.07SPDD403 pKa = 3.47KK404 pKa = 11.18IGDD407 pKa = 3.52VYY409 pKa = 10.88LQKK412 pKa = 10.74NGQLMGSLTSFPLLCFINWISYY434 pKa = 8.03QFSKK438 pKa = 11.23YY439 pKa = 10.27LVNNYY444 pKa = 9.29PDD446 pKa = 3.34EE447 pKa = 4.59HH448 pKa = 8.31LSEE451 pKa = 4.48SCAINGDD458 pKa = 3.98DD459 pKa = 4.46IYY461 pKa = 11.4FKK463 pKa = 11.23ASLKK467 pKa = 10.71GYY469 pKa = 10.23AKK471 pKa = 8.86WQEE474 pKa = 4.17VVHH477 pKa = 6.4SFGLSPSPGKK487 pKa = 10.38NYY489 pKa = 10.39SSSNCFLINSRR500 pKa = 11.84NFLVNTKK507 pKa = 10.21SEE509 pKa = 4.18LKK511 pKa = 10.01EE512 pKa = 3.64IPFINFQMLPQYY524 pKa = 11.06SEE526 pKa = 4.15DD527 pKa = 3.67SNNKK531 pKa = 9.17FEE533 pKa = 4.84HH534 pKa = 5.93NKK536 pKa = 10.2KK537 pKa = 10.09EE538 pKa = 4.81LLNQMKK544 pKa = 10.17GDD546 pKa = 3.79SVYY549 pKa = 11.2SEE551 pKa = 4.42VNSPIGIIFRR561 pKa = 11.84TFCKK565 pKa = 9.67QANINLVKK573 pKa = 10.2PSKK576 pKa = 10.62FDD578 pKa = 3.1IQLIYY583 pKa = 10.86YY584 pKa = 8.43FYY586 pKa = 11.15SVWKK590 pKa = 10.37KK591 pKa = 10.66EE592 pKa = 3.98IIKK595 pKa = 10.28CPRR598 pKa = 11.84EE599 pKa = 3.94FYY601 pKa = 10.85LPSLIGGMGALTLDD615 pKa = 3.77EE616 pKa = 4.6FKK618 pKa = 10.27KK619 pKa = 9.61TNLLTKK625 pKa = 9.25TKK627 pKa = 10.23KK628 pKa = 10.48LSLLRR633 pKa = 11.84GFKK636 pKa = 10.39CKK638 pKa = 10.43SCFYY642 pKa = 8.95MQTYY646 pKa = 8.39EE647 pKa = 4.92QIGSDD652 pKa = 3.31KK653 pKa = 11.25DD654 pKa = 3.66QIEE657 pKa = 4.34SFAAKK662 pKa = 10.14LEE664 pKa = 4.15NIILDD669 pKa = 4.15EE670 pKa = 4.75LSGTDD675 pKa = 4.01PEE677 pKa = 4.33NKK679 pKa = 9.52QLSSKK684 pKa = 10.82SLLSPVSTFVSKK696 pKa = 11.12GGVEE700 pKa = 4.4KK701 pKa = 10.45YY702 pKa = 8.96TLQKK706 pKa = 10.53FFKK709 pKa = 10.18KK710 pKa = 10.16LGKK713 pKa = 10.12SSFRR717 pKa = 11.84NRR719 pKa = 11.84KK720 pKa = 8.4FKK722 pKa = 10.34PATVLSIEE730 pKa = 4.22KK731 pKa = 10.6SLL733 pKa = 3.9

Molecular weight: 84.36 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

733

733

733

733.0

84.36

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.001 ± 0.0

2.183 ± 0.0

5.184 ± 0.0

6.412 ± 0.0

5.321 ± 0.0

3.82 ± 0.0

1.91 ± 0.0

6.276 ± 0.0

10.368 ± 0.0

11.187 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.501 ± 0.0

7.094 ± 0.0

3.683 ± 0.0

3.82 ± 0.0

3.683 ± 0.0

10.778 ± 0.0

4.638 ± 0.0

4.229 ± 0.0

0.819 ± 0.0

4.093 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski