Simian torque teno virus 31

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus; Torque teno chlorocebus virus 3

Average proteome isoelectric point is 8.48

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C5IMV2|A0A0C5IMV2_9VIRU Capsid protein OS=Simian torque teno virus 31 OX=1619219 PE=3 SV=1
MM1 pKa = 7.08SQLHH5 pKa = 5.06FRR7 pKa = 11.84RR8 pKa = 11.84RR9 pKa = 11.84RR10 pKa = 11.84PRR12 pKa = 11.84PPVHH16 pKa = 6.23GQTGQHH22 pKa = 6.62PSDD25 pKa = 3.75LHH27 pKa = 5.79MFWKK31 pKa = 10.54APQEE35 pKa = 3.93DD36 pKa = 4.02ARR38 pKa = 11.84TLEE41 pKa = 4.28TRR43 pKa = 11.84WLRR46 pKa = 11.84MVLMSHH52 pKa = 6.22STFCHH57 pKa = 6.17CLHH60 pKa = 7.1PLGHH64 pKa = 6.74LHH66 pKa = 6.41YY67 pKa = 10.59ISVRR71 pKa = 11.84DD72 pKa = 4.19KK73 pKa = 11.04GPHH76 pKa = 5.56GQGQTPPRR84 pKa = 11.84TPQLDD89 pKa = 3.86VPPNTPVTTSTPANSTGGSQSLSSGRR115 pKa = 11.84GSWPGTGGEE124 pKa = 4.36EE125 pKa = 3.86EE126 pKa = 4.88GEE128 pKa = 4.08AGGAGAGGIDD138 pKa = 4.84DD139 pKa = 4.14YY140 pKa = 12.09SEE142 pKa = 4.94ADD144 pKa = 3.61LAEE147 pKa = 4.83LYY149 pKa = 10.85AAVDD153 pKa = 3.48GDD155 pKa = 3.78AAGRR159 pKa = 3.68

Molecular weight: 17.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C5IMV2|A0A0C5IMV2_9VIRU Capsid protein OS=Simian torque teno virus 31 OX=1619219 PE=3 SV=1
MM1 pKa = 7.45AWYY4 pKa = 8.93GWRR7 pKa = 11.84RR8 pKa = 11.84RR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84GWGRR15 pKa = 11.84RR16 pKa = 11.84RR17 pKa = 11.84WRR19 pKa = 11.84YY20 pKa = 9.39RR21 pKa = 11.84RR22 pKa = 11.84LLRR25 pKa = 11.84GRR27 pKa = 11.84PRR29 pKa = 11.84RR30 pKa = 11.84ALRR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84GWRR38 pKa = 11.84RR39 pKa = 11.84RR40 pKa = 11.84WQVRR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84RR47 pKa = 11.84WGRR50 pKa = 11.84RR51 pKa = 11.84WRR53 pKa = 11.84RR54 pKa = 11.84RR55 pKa = 11.84RR56 pKa = 11.84HH57 pKa = 4.52RR58 pKa = 11.84RR59 pKa = 11.84PRR61 pKa = 11.84RR62 pKa = 11.84RR63 pKa = 11.84RR64 pKa = 11.84RR65 pKa = 11.84YY66 pKa = 7.68RR67 pKa = 11.84RR68 pKa = 11.84RR69 pKa = 11.84RR70 pKa = 11.84RR71 pKa = 11.84RR72 pKa = 11.84RR73 pKa = 11.84RR74 pKa = 11.84TLALRR79 pKa = 11.84QWNPTTVRR87 pKa = 11.84GCSIRR92 pKa = 11.84GWFPFLITGLGRR104 pKa = 11.84LPFLYY109 pKa = 9.05THH111 pKa = 6.72HH112 pKa = 7.01MDD114 pKa = 6.08DD115 pKa = 3.88IPAEE119 pKa = 4.12KK120 pKa = 9.74MSFGGGLAVSRR131 pKa = 11.84FSLSVLYY138 pKa = 10.37EE139 pKa = 3.85EE140 pKa = 5.59YY141 pKa = 10.17RR142 pKa = 11.84RR143 pKa = 11.84HH144 pKa = 5.37HH145 pKa = 6.22NKK147 pKa = 9.18WSRR150 pKa = 11.84SNVDD154 pKa = 3.69LDD156 pKa = 3.51LLRR159 pKa = 11.84YY160 pKa = 9.68HH161 pKa = 6.76GVSFKK166 pKa = 10.51FYY168 pKa = 10.33RR169 pKa = 11.84EE170 pKa = 3.97PEE172 pKa = 3.43IDD174 pKa = 5.87FIVHH178 pKa = 6.41WSLEE182 pKa = 4.25TPMEE186 pKa = 4.6INLMTHH192 pKa = 6.23MSLHH196 pKa = 6.58PLLLLLNKK204 pKa = 9.84HH205 pKa = 6.37KK206 pKa = 10.59IIIPSMKK213 pKa = 9.15TRR215 pKa = 11.84PHH217 pKa = 5.56GRR219 pKa = 11.84RR220 pKa = 11.84AVRR223 pKa = 11.84LTLPPPRR230 pKa = 11.84LMTNKK235 pKa = 9.54WYY237 pKa = 7.95FTKK240 pKa = 10.57DD241 pKa = 3.07FCKK244 pKa = 10.67VGLCMLMATPCSLLYY259 pKa = 10.06PWLDD263 pKa = 3.47PGKK266 pKa = 9.02TSPCVHH272 pKa = 6.06FHH274 pKa = 7.2ILDD277 pKa = 3.34QSYY280 pKa = 10.51YY281 pKa = 10.6KK282 pKa = 10.2HH283 pKa = 6.61IPNIDD288 pKa = 3.42PNKK291 pKa = 8.01YY292 pKa = 7.46TEE294 pKa = 4.47RR295 pKa = 11.84EE296 pKa = 3.86NDD298 pKa = 3.4LKK300 pKa = 11.16DD301 pKa = 3.13ILKK304 pKa = 9.87IDD306 pKa = 4.36GSSSTCVGACHH317 pKa = 7.36CYY319 pKa = 9.97TEE321 pKa = 4.71LFRR324 pKa = 11.84DD325 pKa = 3.76AWPSIRR331 pKa = 11.84KK332 pKa = 8.98PGVASQPFGLTEE344 pKa = 3.58ICKK347 pKa = 7.92TQNYY351 pKa = 7.11TNNSLADD358 pKa = 3.74TFISKK363 pKa = 10.72ANEE366 pKa = 3.5AHH368 pKa = 7.36SNITDD373 pKa = 3.37KK374 pKa = 11.32LMPCVYY380 pKa = 9.85GSNSAVITQLKK391 pKa = 9.33SSKK394 pKa = 10.61DD395 pKa = 3.17KK396 pKa = 11.09TFMHH400 pKa = 6.59RR401 pKa = 11.84WGLYY405 pKa = 7.3SHH407 pKa = 6.85YY408 pKa = 10.53FLTTRR413 pKa = 11.84RR414 pKa = 11.84LDD416 pKa = 3.67PQLTGPTIKK425 pKa = 10.41VGYY428 pKa = 9.63NPQTDD433 pKa = 3.55EE434 pKa = 4.48GKK436 pKa = 11.14GNLIFLQPLTRR447 pKa = 11.84SDD449 pKa = 3.85TIFNPTSSKK458 pKa = 10.6CAIFDD463 pKa = 3.86TPLWLALYY471 pKa = 9.85GYY473 pKa = 10.23EE474 pKa = 4.26SYY476 pKa = 9.35CTKK479 pKa = 10.46FLNDD483 pKa = 3.37EE484 pKa = 4.12QVMYY488 pKa = 10.95NYY490 pKa = 9.56VLCVRR495 pKa = 11.84CTYY498 pKa = 8.11TWPRR502 pKa = 11.84MYY504 pKa = 10.05RR505 pKa = 11.84TGNPNQCDD513 pKa = 3.36IPLGNSFLEE522 pKa = 4.61GNMPGGAYY530 pKa = 8.45PPPLLMRR537 pKa = 11.84TKK539 pKa = 9.86WYY541 pKa = 8.98PCLLHH546 pKa = 6.78QRR548 pKa = 11.84EE549 pKa = 4.62FINAVVGSGPFMPRR563 pKa = 11.84GYY565 pKa = 10.09SVKK568 pKa = 10.05SWEE571 pKa = 3.89LTAGYY576 pKa = 10.21KK577 pKa = 10.18FRR579 pKa = 11.84FSWGGHH585 pKa = 4.7APYY588 pKa = 9.57TKK590 pKa = 10.3QVDD593 pKa = 4.06DD594 pKa = 3.96PCKK597 pKa = 10.31KK598 pKa = 9.13GTHH601 pKa = 6.61ALPDD605 pKa = 3.98PDD607 pKa = 3.88RR608 pKa = 11.84QRR610 pKa = 11.84MAVQVEE616 pKa = 4.33DD617 pKa = 4.46PGRR620 pKa = 11.84LDD622 pKa = 3.38PQYY625 pKa = 10.33MFHH628 pKa = 6.74GWDD631 pKa = 3.07QRR633 pKa = 11.84RR634 pKa = 11.84GYY636 pKa = 10.37ILGRR640 pKa = 11.84AIKK643 pKa = 10.01RR644 pKa = 11.84VSEE647 pKa = 4.23DD648 pKa = 3.53PGHH651 pKa = 7.3DD652 pKa = 3.34SDD654 pKa = 5.92IPTGPLKK661 pKa = 10.48RR662 pKa = 11.84PRR664 pKa = 11.84VDD666 pKa = 3.58APPEE670 pKa = 4.46GGWPDD675 pKa = 4.08PEE677 pKa = 4.68RR678 pKa = 11.84GWISSLLQEE687 pKa = 4.46TPPGRR692 pKa = 11.84RR693 pKa = 11.84HH694 pKa = 6.16SPPLQLQLPRR704 pKa = 11.84EE705 pKa = 4.3PEE707 pKa = 3.62EE708 pKa = 3.73TTRR711 pKa = 11.84RR712 pKa = 11.84RR713 pKa = 11.84RR714 pKa = 11.84RR715 pKa = 11.84SEE717 pKa = 4.18GEE719 pKa = 3.61IPPPEE724 pKa = 3.74TAAASTQAFLEE735 pKa = 4.51LEE737 pKa = 4.53LEE739 pKa = 4.26RR740 pKa = 11.84QRR742 pKa = 11.84QQQHH746 pKa = 5.67RR747 pKa = 11.84LRR749 pKa = 11.84KK750 pKa = 9.21GLQDD754 pKa = 3.58LFSRR758 pKa = 11.84LVRR761 pKa = 11.84TEE763 pKa = 4.22GGHH766 pKa = 5.42QVDD769 pKa = 4.08PRR771 pKa = 11.84LLL773 pKa = 4.28

Molecular weight: 91.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1289

159

773

322.3

36.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.896 ± 2.389

1.629 ± 0.501

4.81 ± 0.248

4.344 ± 0.144

3.181 ± 0.46

8.301 ± 1.36

3.103 ± 0.833

3.336 ± 0.57

3.724 ± 0.788

7.603 ± 2.029

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.095 ± 0.383

2.56 ± 0.615

9.465 ± 1.805

4.112 ± 0.555

12.645 ± 1.244

7.448 ± 2.382

6.129 ± 0.41

3.646 ± 0.493

2.638 ± 0.755

3.336 ± 0.797
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski