Corynebacterium uterequi

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Corynebacteriales; Corynebacteriaceae; Corynebacterium

Average proteome isoelectric point is 5.98

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2149 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0G3HC83|A0A0G3HC83_9CORY UvrABC system protein B OS=Corynebacterium uterequi OX=1072256 GN=uvrB PE=3 SV=1
MM1 pKa = 6.8TRR3 pKa = 11.84IRR5 pKa = 11.84ALAALGTVAAFALSGCSLLPSNDD28 pKa = 3.62AGSDD32 pKa = 3.5SSATDD37 pKa = 3.23APAIEE42 pKa = 4.42TPGAGSQGSAVSSAEE57 pKa = 4.01SAPAKK62 pKa = 10.14SDD64 pKa = 3.29SAAAAPGTNYY74 pKa = 10.19SDD76 pKa = 4.45RR77 pKa = 11.84IEE79 pKa = 4.21ISSLPEE85 pKa = 3.21NDD87 pKa = 3.76IFITVQNLQLGGEE100 pKa = 4.46CAAGEE105 pKa = 4.08YY106 pKa = 10.19TPGEE110 pKa = 4.25KK111 pKa = 10.08LDD113 pKa = 4.59DD114 pKa = 3.85LTGAQYY120 pKa = 10.17VQLWVEE126 pKa = 4.2QEE128 pKa = 3.91AEE130 pKa = 4.34RR131 pKa = 11.84IDD133 pKa = 4.28NPDD136 pKa = 3.32SAPFATLYY144 pKa = 11.04GPDD147 pKa = 3.53YY148 pKa = 11.33VDD150 pKa = 3.7AQGQVLPAVAALDD163 pKa = 3.68CRR165 pKa = 11.84EE166 pKa = 3.89VDD168 pKa = 5.1GYY170 pKa = 10.59EE171 pKa = 4.08SWGKK175 pKa = 9.25PVDD178 pKa = 4.1PGTKK182 pKa = 8.26AQHH185 pKa = 5.78YY186 pKa = 8.59GAFIIPEE193 pKa = 4.55GATEE197 pKa = 3.9IQIEE201 pKa = 4.43GHH203 pKa = 5.69SFPLL207 pKa = 4.03

Molecular weight: 21.36 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0G3HFV6|A0A0G3HFV6_9CORY Lycopene cyclase domain OS=Corynebacterium uterequi OX=1072256 GN=CUTER_00100 PE=4 SV=1
MM1 pKa = 7.69AKK3 pKa = 10.06GKK5 pKa = 8.69RR6 pKa = 11.84TFQPNNRR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84SRR17 pKa = 11.84KK18 pKa = 7.88HH19 pKa = 4.75GFRR22 pKa = 11.84IRR24 pKa = 11.84MRR26 pKa = 11.84TRR28 pKa = 11.84AGRR31 pKa = 11.84AIVAARR37 pKa = 11.84RR38 pKa = 11.84KK39 pKa = 9.72KK40 pKa = 10.5GRR42 pKa = 11.84AKK44 pKa = 9.67LTAA47 pKa = 4.21

Molecular weight: 5.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2149

0

2149

718476

39

2995

334.3

35.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.725 ± 0.08

0.697 ± 0.015

6.174 ± 0.051

5.86 ± 0.056

3.164 ± 0.033

8.494 ± 0.05

2.199 ± 0.026

4.738 ± 0.039

2.563 ± 0.042

9.776 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.101 ± 0.025

2.453 ± 0.026

5.24 ± 0.044

2.968 ± 0.026

6.691 ± 0.057

5.677 ± 0.038

6.186 ± 0.039

8.679 ± 0.048

1.355 ± 0.023

2.261 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski