Adonis mosaic virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes; Tolivirales; Tombusviridae; Procedovirinae; Alphacarmovirus

Average proteome isoelectric point is 8.07

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1J1E0V5|A0A1J1E0V5_9TOMB p7K OS=Adonis mosaic virus OX=1883104 GN=ORF5 PE=4 SV=1
MM1 pKa = 7.6GFLKK5 pKa = 10.47FATEE9 pKa = 4.0LAVGSTLMGGLVSVGIAGLTLRR31 pKa = 11.84ATIGVVEE38 pKa = 4.8FEE40 pKa = 3.92RR41 pKa = 11.84RR42 pKa = 11.84IIVGTCKK49 pKa = 10.28YY50 pKa = 9.36VASRR54 pKa = 11.84GLSLPSHH61 pKa = 7.0PEE63 pKa = 3.56YY64 pKa = 10.4PKK66 pKa = 11.19NSDD69 pKa = 3.25QLFLEE74 pKa = 4.77EE75 pKa = 4.29EE76 pKa = 4.43SEE78 pKa = 4.51SLSEE82 pKa = 4.13SQQVVEE88 pKa = 5.47DD89 pKa = 3.8FTEE92 pKa = 4.13LVEE95 pKa = 4.88EE96 pKa = 4.33KK97 pKa = 11.26GEE99 pKa = 4.09DD100 pKa = 3.55KK101 pKa = 10.73EE102 pKa = 4.36GKK104 pKa = 9.76EE105 pKa = 4.01VVISQKK111 pKa = 10.52RR112 pKa = 11.84VINRR116 pKa = 11.84HH117 pKa = 5.32SKK119 pKa = 10.44SKK121 pKa = 9.88FIRR124 pKa = 11.84YY125 pKa = 8.6IAIEE129 pKa = 4.22AKK131 pKa = 10.15NHH133 pKa = 6.75FGGDD137 pKa = 3.58LCASKK142 pKa = 11.13ANYY145 pKa = 10.25LSVSKK150 pKa = 10.47FLTGKK155 pKa = 9.81CKK157 pKa = 9.96EE158 pKa = 4.22RR159 pKa = 11.84QVVPAHH165 pKa = 5.77TRR167 pKa = 11.84VCVASAMALVFTPDD181 pKa = 3.03MAEE184 pKa = 3.72VQMRR188 pKa = 11.84VALNSHH194 pKa = 5.54EE195 pKa = 4.13AYY197 pKa = 9.7RR198 pKa = 11.84RR199 pKa = 11.84RR200 pKa = 11.84VAMEE204 pKa = 3.79AAGSMSSWGMRR215 pKa = 11.84LIQNPLTNSAWEE227 pKa = 4.08EE228 pKa = 3.26AWYY231 pKa = 10.33VLNGRR236 pKa = 11.84SSRR239 pKa = 11.84SAVTFTKK246 pKa = 10.64GGLFYY251 pKa = 11.38LEE253 pKa = 4.35GVEE256 pKa = 4.01TAIRR260 pKa = 11.84RR261 pKa = 11.84GSHH264 pKa = 6.03PSMIEE269 pKa = 3.93VEE271 pKa = 4.66LKK273 pKa = 10.74APPKK277 pKa = 10.03LRR279 pKa = 11.84KK280 pKa = 9.73LYY282 pKa = 9.57VQNSLSSGFDD292 pKa = 3.25YY293 pKa = 10.33RR294 pKa = 11.84VHH296 pKa = 5.42NHH298 pKa = 5.91SYY300 pKa = 9.54QNLRR304 pKa = 11.84RR305 pKa = 11.84GLLEE309 pKa = 3.47RR310 pKa = 11.84VFYY313 pKa = 11.26VEE315 pKa = 5.25SKK317 pKa = 10.77DD318 pKa = 3.93KK319 pKa = 11.08EE320 pKa = 4.32LVGCPRR326 pKa = 11.84PKK328 pKa = 10.2PGAFKK333 pKa = 10.6EE334 pKa = 3.83LGYY337 pKa = 10.43LRR339 pKa = 11.84RR340 pKa = 11.84RR341 pKa = 11.84FHH343 pKa = 7.32RR344 pKa = 11.84ICGNHH349 pKa = 4.54TRR351 pKa = 11.84ISAEE355 pKa = 3.95EE356 pKa = 4.05FVDD359 pKa = 4.84CYY361 pKa = 10.52QGRR364 pKa = 11.84KK365 pKa = 6.25RR366 pKa = 11.84TIYY369 pKa = 10.36EE370 pKa = 3.89NARR373 pKa = 11.84LSLDD377 pKa = 3.65DD378 pKa = 4.24KK379 pKa = 11.47ALEE382 pKa = 4.63RR383 pKa = 11.84KK384 pKa = 10.31DD385 pKa = 4.56GDD387 pKa = 3.54LKK389 pKa = 10.58TFIKK393 pKa = 10.68AEE395 pKa = 3.98KK396 pKa = 10.05FNISVKK402 pKa = 9.93PDD404 pKa = 3.51PAPRR408 pKa = 11.84VIQPRR413 pKa = 11.84SPRR416 pKa = 11.84FNLEE420 pKa = 3.47LGRR423 pKa = 11.84YY424 pKa = 7.93LKK426 pKa = 10.67KK427 pKa = 10.66FEE429 pKa = 4.61HH430 pKa = 6.28NAYY433 pKa = 9.74KK434 pKa = 10.49AIDD437 pKa = 4.56KK438 pKa = 10.37IWGAPTIMKK447 pKa = 10.17GYY449 pKa = 8.22NTEE452 pKa = 3.9EE453 pKa = 4.12VAQHH457 pKa = 6.81LKK459 pKa = 10.45HH460 pKa = 6.61AWDD463 pKa = 3.5QFQIPVAVGFDD474 pKa = 3.25MSRR477 pKa = 11.84FDD479 pKa = 3.32QHH481 pKa = 7.94VSVPALEE488 pKa = 4.93FEE490 pKa = 4.51HH491 pKa = 7.0SCYY494 pKa = 10.02TSCFEE499 pKa = 4.98GDD501 pKa = 3.18QHH503 pKa = 7.76LADD506 pKa = 4.48LLKK509 pKa = 10.13MQLKK513 pKa = 8.85NHH515 pKa = 5.75GVGFASNGMIRR526 pKa = 11.84YY527 pKa = 6.39TKK529 pKa = 9.82EE530 pKa = 3.57GCRR533 pKa = 11.84MSGDD537 pKa = 3.52MNTALGNCLLACLITKK553 pKa = 10.13HH554 pKa = 4.93ITRR557 pKa = 11.84GVRR560 pKa = 11.84GKK562 pKa = 10.71LINNGDD568 pKa = 3.87DD569 pKa = 3.53CVFICEE575 pKa = 4.19RR576 pKa = 11.84SDD578 pKa = 3.32AGSVVSDD585 pKa = 4.49LTTGWASFGFNCIAEE600 pKa = 4.47TPVEE604 pKa = 4.24VFEE607 pKa = 5.16EE608 pKa = 4.04IRR610 pKa = 11.84FCQMAPVFDD619 pKa = 4.13GEE621 pKa = 4.46VWVMVRR627 pKa = 11.84DD628 pKa = 4.2PKK630 pKa = 11.42VSMSKK635 pKa = 10.19DD636 pKa = 3.13AHH638 pKa = 7.1SLVHH642 pKa = 6.29WNNEE646 pKa = 3.59RR647 pKa = 11.84NALQWFKK654 pKa = 11.37AVGQCGMKK662 pKa = 9.78IAGRR666 pKa = 11.84VPVVQEE672 pKa = 3.95YY673 pKa = 7.1YY674 pKa = 10.31QKK676 pKa = 10.92YY677 pKa = 9.14IEE679 pKa = 4.5TGGDD683 pKa = 3.3VKK685 pKa = 10.43TSGSLSEE692 pKa = 4.2QVGGTGMFRR701 pKa = 11.84MAANSTRR708 pKa = 11.84GYY710 pKa = 10.73GAISQEE716 pKa = 3.76ARR718 pKa = 11.84YY719 pKa = 10.25SFYY722 pKa = 10.85LAFGIQPDD730 pKa = 3.67EE731 pKa = 4.37QIALEE736 pKa = 4.01HH737 pKa = 7.12EE738 pKa = 4.1IRR740 pKa = 11.84KK741 pKa = 5.64TTIHH745 pKa = 6.23ATLGPQCEE753 pKa = 4.56SADD756 pKa = 3.9SIQWLINPNLTT767 pKa = 3.6

Molecular weight: 86.18 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1J1DWM6|A0A1J1DWM6_9TOMB RNA-directed RNA polymerase OS=Adonis mosaic virus OX=1883104 GN=ORF1RT PE=4 SV=1
MM1 pKa = 7.74PSANQNLTVITGVIGLLWLMRR22 pKa = 11.84SRR24 pKa = 11.84SILHH28 pKa = 6.65SIFEE32 pKa = 4.26AAKK35 pKa = 9.71PPPLLTLSQIIVFSFCGLLLNCISRR60 pKa = 11.84AEE62 pKa = 4.03RR63 pKa = 11.84EE64 pKa = 4.14VVITNNHH71 pKa = 6.62DD72 pKa = 3.49SSKK75 pKa = 9.64QQHH78 pKa = 5.51ITVNTPSKK86 pKa = 10.95

Molecular weight: 9.51 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1576

64

767

262.7

29.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.741 ± 0.561

1.904 ± 0.413

3.744 ± 0.699

6.98 ± 0.911

4.569 ± 0.375

7.424 ± 0.77

2.411 ± 0.502

4.569 ± 0.821

6.091 ± 0.315

7.868 ± 0.587

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.538 ± 0.246

4.251 ± 0.711

3.934 ± 0.568

3.49 ± 0.276

6.218 ± 0.426

8.249 ± 0.829

5.266 ± 0.724

8.566 ± 0.678

1.586 ± 0.312

2.538 ± 0.616
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski