Ceratocystis polonica partitivirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Partitiviridae; Betapartitivirus; Ceratocystis resinifera virus 1

Average proteome isoelectric point is 6.52

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q6X9T6|Q6X9T6_9VIRU Putative RNA-dependent RNA polymerase OS=Ceratocystis polonica partitivirus OX=235434 GN=RDRP PE=4 SV=1
MM1 pKa = 7.15SHH3 pKa = 7.84DD4 pKa = 3.89ARR6 pKa = 11.84DD7 pKa = 3.75LQSEE11 pKa = 4.18ARR13 pKa = 11.84QEE15 pKa = 3.93VRR17 pKa = 11.84PSGLQPDD24 pKa = 3.99AHH26 pKa = 6.53SHH28 pKa = 5.66EE29 pKa = 5.37PIGLNNSIARR39 pKa = 11.84TAPSSSAGPGLTAPHH54 pKa = 6.94AGTRR58 pKa = 11.84SLGLPCKK65 pKa = 10.65GEE67 pKa = 4.03ASHH70 pKa = 7.34SSEE73 pKa = 4.0ASSLARR79 pKa = 11.84DD80 pKa = 3.02IDD82 pKa = 3.69LGRR85 pKa = 11.84NCSRR89 pKa = 11.84SSGEE93 pKa = 4.01RR94 pKa = 11.84PFLIQVVPDD103 pKa = 3.55SRR105 pKa = 11.84FACYY109 pKa = 10.61VFTEE113 pKa = 4.42YY114 pKa = 10.93VQQNYY119 pKa = 10.17SKK121 pKa = 10.8FDD123 pKa = 3.62VEE125 pKa = 4.47SSSMVSPATVVGYY138 pKa = 10.76LMYY141 pKa = 10.3CLHH144 pKa = 6.93AFIFLTDD151 pKa = 4.0VYY153 pKa = 11.09SSSTMSAYY161 pKa = 10.32AEE163 pKa = 4.73EE164 pKa = 4.81IDD166 pKa = 4.33ASHH169 pKa = 7.23IMRR172 pKa = 11.84KK173 pKa = 10.11LIDD176 pKa = 3.6IFSNCLVPDD185 pKa = 3.71IVFSVLDD192 pKa = 3.71ALHH195 pKa = 6.04PHH197 pKa = 6.57KK198 pKa = 10.79LDD200 pKa = 3.11VRR202 pKa = 11.84TTVSLFPSYY211 pKa = 11.16GSVLFEE217 pKa = 3.96YY218 pKa = 10.08DD219 pKa = 3.67APRR222 pKa = 11.84LIPPSIFLLAHH233 pKa = 5.89NQLLTQTKK241 pKa = 9.39VPNSYY246 pKa = 10.65KK247 pKa = 10.14SWLSQTCVTYY257 pKa = 8.92NTEE260 pKa = 4.21DD261 pKa = 3.57YY262 pKa = 10.77RR263 pKa = 11.84VGNIIGGIYY272 pKa = 7.73QTISGSTTEE281 pKa = 4.06TFQYY285 pKa = 8.85KK286 pKa = 8.21TWLLRR291 pKa = 11.84SLSRR295 pKa = 11.84LADD298 pKa = 3.5SATHH302 pKa = 5.62RR303 pKa = 11.84THH305 pKa = 7.63LKK307 pKa = 9.87RR308 pKa = 11.84NAVTEE313 pKa = 4.1IQFDD317 pKa = 3.99PPSFTDD323 pKa = 4.01ADD325 pKa = 4.26FNPYY329 pKa = 9.58TYY331 pKa = 11.5LLMLSPSSRR340 pKa = 11.84TTTTSFLTALSSSCQKK356 pKa = 10.49YY357 pKa = 10.81LNATRR362 pKa = 11.84SLSSVLATRR371 pKa = 11.84SGSITRR377 pKa = 11.84HH378 pKa = 5.44MIFDD382 pKa = 4.25LTAPTANYY390 pKa = 7.58STLIDD395 pKa = 4.09LDD397 pKa = 3.85EE398 pKa = 5.33SSVLKK403 pKa = 10.41PGNFANFCKK412 pKa = 10.4AVDD415 pKa = 4.36FCPPQISNPPKK426 pKa = 10.52KK427 pKa = 9.55LTLPYY432 pKa = 9.57PPGVEE437 pKa = 4.03AHH439 pKa = 6.7PSLYY443 pKa = 10.63LVTEE447 pKa = 4.48KK448 pKa = 10.75EE449 pKa = 4.35SEE451 pKa = 4.41SPLKK455 pKa = 9.99PLRR458 pKa = 11.84PSYY461 pKa = 9.96EE462 pKa = 3.92DD463 pKa = 3.29HH464 pKa = 7.77VEE466 pKa = 4.04GQILLFDD473 pKa = 5.31PYY475 pKa = 11.24DD476 pKa = 4.51DD477 pKa = 4.37EE478 pKa = 5.77PSAHH482 pKa = 6.81FSTLISGKK490 pKa = 10.35LIEE493 pKa = 4.96NGNVDD498 pKa = 4.78GITIFLPSPSSSISAVNSRR517 pKa = 11.84NLQGAIPLCRR527 pKa = 11.84IQATFAGFPFQQYY540 pKa = 8.92PRR542 pKa = 11.84SHH544 pKa = 6.49APSSRR549 pKa = 11.84MFTMSILYY557 pKa = 9.8DD558 pKa = 3.71AANIWLPYY566 pKa = 8.77FNRR569 pKa = 11.84VMYY572 pKa = 10.23SALPILPYY580 pKa = 9.08TANRR584 pKa = 11.84NADD587 pKa = 3.53GLVPSTNLVVTSSKK601 pKa = 9.71TVSTPSFSPDD611 pKa = 2.71VSLWSSYY618 pKa = 10.07RR619 pKa = 11.84YY620 pKa = 9.66QPTNEE625 pKa = 4.22RR626 pKa = 11.84PTPQNVYY633 pKa = 9.49MYY635 pKa = 8.81ATLEE639 pKa = 4.09PFFGSRR645 pKa = 11.84SSYY648 pKa = 9.03LQSYY652 pKa = 7.65QLQVLLPISS661 pKa = 3.62

Molecular weight: 73.17 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q6X9T6|Q6X9T6_9VIRU Putative RNA-dependent RNA polymerase OS=Ceratocystis polonica partitivirus OX=235434 GN=RDRP PE=4 SV=1
MM1 pKa = 7.9PSFSANPTYY10 pKa = 9.53QTLIDD15 pKa = 5.93DD16 pKa = 4.15IDD18 pKa = 4.71FDD20 pKa = 4.55VPIAHH25 pKa = 7.36PFSVINTDD33 pKa = 3.72LQPVDD38 pKa = 4.91DD39 pKa = 5.15EE40 pKa = 4.72EE41 pKa = 4.7TVHH44 pKa = 7.38DD45 pKa = 5.04LGSKK49 pKa = 10.41DD50 pKa = 3.34FEE52 pKa = 4.57FYY54 pKa = 10.89KK55 pKa = 10.79VVSDD59 pKa = 3.79NLPPTRR65 pKa = 11.84APSIGIEE72 pKa = 3.95SLPNIRR78 pKa = 11.84YY79 pKa = 8.9HH80 pKa = 5.68NHH82 pKa = 6.0SNDD85 pKa = 2.53HH86 pKa = 7.1RR87 pKa = 11.84YY88 pKa = 9.66RR89 pKa = 11.84DD90 pKa = 3.88QPPTGPPPMRR100 pKa = 11.84GVRR103 pKa = 11.84KK104 pKa = 9.91IINDD108 pKa = 3.62SFPQYY113 pKa = 10.94LPYY116 pKa = 10.56LKK118 pKa = 9.89EE119 pKa = 3.33WCRR122 pKa = 11.84PKK124 pKa = 10.42TSSDD128 pKa = 3.95AIFEE132 pKa = 4.84DD133 pKa = 5.28FNQPQIPSIPLSYY146 pKa = 10.39NRR148 pKa = 11.84KK149 pKa = 8.37QRR151 pKa = 11.84ILNLVNHH158 pKa = 6.29FMGVKK163 pKa = 9.81PYY165 pKa = 10.58DD166 pKa = 3.31IVHH169 pKa = 6.32FCDD172 pKa = 3.01TRR174 pKa = 11.84FYY176 pKa = 10.71PWDD179 pKa = 3.66LSKK182 pKa = 11.18KK183 pKa = 9.61ADD185 pKa = 3.61YY186 pKa = 10.16FHH188 pKa = 6.67NHH190 pKa = 3.66SNARR194 pKa = 11.84KK195 pKa = 8.35RR196 pKa = 11.84HH197 pKa = 5.02AQTSHH202 pKa = 6.64ASTATGPTKK211 pKa = 10.57KK212 pKa = 10.02SWFINAHH219 pKa = 6.13LFHH222 pKa = 7.45DD223 pKa = 4.68RR224 pKa = 11.84STVHH228 pKa = 6.61NIKK231 pKa = 10.7LYY233 pKa = 9.86GLPFKK238 pKa = 9.99PHH240 pKa = 6.52SYY242 pKa = 9.37EE243 pKa = 3.77ARR245 pKa = 11.84NKK247 pKa = 10.08ILLEE251 pKa = 3.93LWFKK255 pKa = 11.05KK256 pKa = 10.31IPTEE260 pKa = 3.77LLVRR264 pKa = 11.84SHH266 pKa = 7.07ISNPKK271 pKa = 7.83KK272 pKa = 10.73LKK274 pKa = 9.98VRR276 pKa = 11.84PVNNAPMIFLRR287 pKa = 11.84IEE289 pKa = 3.95CMLFYY294 pKa = 10.57PLLAQLRR301 pKa = 11.84KK302 pKa = 7.74QQCSIMYY309 pKa = 9.82GLEE312 pKa = 4.19TIRR315 pKa = 11.84GGMMEE320 pKa = 4.35IEE322 pKa = 4.23SLATRR327 pKa = 11.84FSNFMMIDD335 pKa = 3.05WSKK338 pKa = 11.11FDD340 pKa = 3.26QTVPFTLVDD349 pKa = 3.2MFYY352 pKa = 10.9QDD354 pKa = 4.79WIPTLILVDD363 pKa = 3.38SGYY366 pKa = 11.66AKK368 pKa = 9.51IHH370 pKa = 6.27NYY372 pKa = 9.35NDD374 pKa = 3.68HH375 pKa = 5.51VHH377 pKa = 6.44SFAAQARR384 pKa = 11.84KK385 pKa = 10.07LGVHH389 pKa = 6.7GDD391 pKa = 3.75SNLNEE396 pKa = 4.84APPEE400 pKa = 3.94AAVFANKK407 pKa = 9.76VEE409 pKa = 4.08NLLKK413 pKa = 10.72FINTWFKK420 pKa = 10.55EE421 pKa = 4.21MVYY424 pKa = 8.81ITPDD428 pKa = 2.69GFAYY432 pKa = 10.53SRR434 pKa = 11.84TFAGVPSGILCTQLIDD450 pKa = 3.71SFVNLVVLIDD460 pKa = 3.59SLFEE464 pKa = 4.18FGFHH468 pKa = 6.82EE469 pKa = 4.67SDD471 pKa = 3.13IKK473 pKa = 11.04SALILLMGDD482 pKa = 3.8DD483 pKa = 4.13NVVFAPDD490 pKa = 4.16KK491 pKa = 10.85LSQLHH496 pKa = 6.28SFFKK500 pKa = 10.61FLPDD504 pKa = 3.42YY505 pKa = 10.98AKK507 pKa = 10.6KK508 pKa = 9.68RR509 pKa = 11.84WNMKK513 pKa = 9.67VNVDD517 pKa = 3.29KK518 pKa = 11.43SIFTTLRR525 pKa = 11.84RR526 pKa = 11.84KK527 pKa = 9.82IEE529 pKa = 3.67ILGYY533 pKa = 7.61TNNYY537 pKa = 8.42GMPVRR542 pKa = 11.84SLSKK546 pKa = 10.81LIGQLAYY553 pKa = 9.75PEE555 pKa = 4.29RR556 pKa = 11.84HH557 pKa = 6.15VNDD560 pKa = 3.75SDD562 pKa = 3.22MCMRR566 pKa = 11.84AIGFAWCAAASDD578 pKa = 4.22STFHH582 pKa = 6.97DD583 pKa = 4.67FCRR586 pKa = 11.84KK587 pKa = 8.92VFIYY591 pKa = 10.29YY592 pKa = 8.45YY593 pKa = 11.0ARR595 pKa = 11.84VNVPIKK601 pKa = 10.89DD602 pKa = 3.85LVQSNASALPGMFFAYY618 pKa = 10.0RR619 pKa = 11.84DD620 pKa = 3.61VHH622 pKa = 5.18QHH624 pKa = 5.23IKK626 pKa = 10.48LDD628 pKa = 3.63HH629 pKa = 6.35FPSIEE634 pKa = 3.96EE635 pKa = 3.88VRR637 pKa = 11.84QVLSKK642 pKa = 10.21HH643 pKa = 5.82HH644 pKa = 6.94GYY646 pKa = 8.26LTEE649 pKa = 4.23EE650 pKa = 4.55PLWKK654 pKa = 10.22YY655 pKa = 11.4DD656 pKa = 3.65FFLHH660 pKa = 6.57PKK662 pKa = 8.8PP663 pKa = 4.15

Molecular weight: 76.86 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1324

661

663

662.0

75.01

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.118 ± 0.4

1.36 ± 0.114

5.665 ± 0.724

3.776 ± 0.004

5.891 ± 0.892

3.776 ± 0.117

3.55 ± 0.726

5.816 ± 0.611

4.456 ± 1.399

9.366 ± 0.572

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.19 ± 0.391

4.758 ± 0.5

7.477 ± 0.402

3.323 ± 0.228

4.834 ± 0.005

10.423 ± 2.483

5.816 ± 1.186

5.665 ± 0.162

1.057 ± 0.336

4.683 ± 0.23
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski