Bovine papillomavirus

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; unclassified Papillomaviridae; non-primate mammal papillomaviruses

Average proteome isoelectric point is 5.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Z3FWK6|A0A1Z3FWK6_9PAPI Minor capsid protein L2 OS=Bovine papillomavirus OX=10571 GN=L2 PE=3 SV=1
MM1 pKa = 7.15SRR3 pKa = 11.84RR4 pKa = 11.84RR5 pKa = 11.84KK6 pKa = 9.78RR7 pKa = 11.84DD8 pKa = 3.18TVQNIYY14 pKa = 8.43NTCKK18 pKa = 10.05IWGNCPDD25 pKa = 3.9DD26 pKa = 4.54VINKK30 pKa = 9.25VEE32 pKa = 4.17SSTIADD38 pKa = 4.25KK39 pKa = 10.76ILKK42 pKa = 9.26YY43 pKa = 10.87GSGLVYY49 pKa = 10.45FGNAGIGTGSGGGGRR64 pKa = 11.84LGYY67 pKa = 10.4LPLGNRR73 pKa = 11.84PAGRR77 pKa = 11.84PAVPFSRR84 pKa = 11.84PTTRR88 pKa = 11.84VTTRR92 pKa = 11.84VPPIVEE98 pKa = 4.14TVVPDD103 pKa = 4.42SIAGNVVDD111 pKa = 5.16AGGPSVIDD119 pKa = 3.54LTDD122 pKa = 3.42LTTEE126 pKa = 3.96STGVDD131 pKa = 2.9VHH133 pKa = 6.89PDD135 pKa = 3.34VEE137 pKa = 4.62PGVLEE142 pKa = 4.68PGPTEE147 pKa = 4.07PPSIDD152 pKa = 3.44VTSDD156 pKa = 3.14TSPTIQVTEE165 pKa = 4.73SIHH168 pKa = 6.6SNPTFEE174 pKa = 4.17IPVVNGSTYY183 pKa = 8.57PTEE186 pKa = 4.27AVDD189 pKa = 3.47INTVSTVSTIIGTEE203 pKa = 3.92EE204 pKa = 3.92SAPLYY209 pKa = 10.25IPEE212 pKa = 4.56TIEE215 pKa = 3.83LQTFNTQRR223 pKa = 11.84TANNTFSEE231 pKa = 4.63TIIDD235 pKa = 3.66DD236 pKa = 3.81TGFDD240 pKa = 3.42SSTPLGKK247 pKa = 10.18RR248 pKa = 11.84PPEE251 pKa = 4.04GRR253 pKa = 11.84LGGARR258 pKa = 11.84VSVYY262 pKa = 10.32NKK264 pKa = 9.69RR265 pKa = 11.84YY266 pKa = 9.38AQVEE270 pKa = 4.32VEE272 pKa = 4.35NPAFIRR278 pKa = 11.84DD279 pKa = 4.12PYY281 pKa = 11.19TLVQYY286 pKa = 11.39SNVSYY291 pKa = 10.82DD292 pKa = 3.67PEE294 pKa = 4.15DD295 pKa = 3.35TVTFNRR301 pKa = 11.84GSGDD305 pKa = 3.42VNTAPDD311 pKa = 3.83PAFQDD316 pKa = 3.5VLKK319 pKa = 10.71LSKK322 pKa = 10.25PYY324 pKa = 7.6TTRR327 pKa = 11.84SPGGHH332 pKa = 5.2VRR334 pKa = 11.84LGRR337 pKa = 11.84VGQRR341 pKa = 11.84AGVKK345 pKa = 8.64TRR347 pKa = 11.84SGLQIGPQVHH357 pKa = 5.99YY358 pKa = 7.16FTRR361 pKa = 11.84ISSIDD366 pKa = 3.33PGEE369 pKa = 4.28TIEE372 pKa = 5.97LEE374 pKa = 4.34VLGDD378 pKa = 3.88PNTPDD383 pKa = 3.37VLVGDD388 pKa = 4.73DD389 pKa = 3.87EE390 pKa = 5.04FDD392 pKa = 3.29IVSLTEE398 pKa = 4.0SLADD402 pKa = 3.8SYY404 pKa = 11.87SEE406 pKa = 4.69SDD408 pKa = 3.74LLDD411 pKa = 3.45VLEE414 pKa = 5.87DD415 pKa = 3.12IGEE418 pKa = 4.08NLQLVMGGRR427 pKa = 11.84RR428 pKa = 11.84RR429 pKa = 11.84GPSVPVFTPRR439 pKa = 11.84GYY441 pKa = 10.07PPIEE445 pKa = 4.75SITVNFPGSGITIDD459 pKa = 3.69EE460 pKa = 4.36STAQSDD466 pKa = 4.01DD467 pKa = 3.76EE468 pKa = 4.8VPIEE472 pKa = 4.22PDD474 pKa = 3.03IPSTPSTPIRR484 pKa = 11.84PGLDD488 pKa = 3.07VYY490 pKa = 11.6DD491 pKa = 4.92SIDD494 pKa = 3.81FYY496 pKa = 11.47LHH498 pKa = 6.65PSLGKK503 pKa = 10.28KK504 pKa = 9.18LRR506 pKa = 11.84KK507 pKa = 8.27KK508 pKa = 10.1RR509 pKa = 11.84KK510 pKa = 7.99RR511 pKa = 11.84RR512 pKa = 11.84FYY514 pKa = 11.37

Molecular weight: 55.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Z3FWF3|A0A1Z3FWF3_9PAPI Replication protein E1 OS=Bovine papillomavirus OX=10571 GN=E1 PE=3 SV=1
MM1 pKa = 7.8EE2 pKa = 5.38ILSARR7 pKa = 11.84LDD9 pKa = 3.71ALQEE13 pKa = 4.38DD14 pKa = 4.95LLSLYY19 pKa = 10.06EE20 pKa = 4.27SNKK23 pKa = 10.14NDD25 pKa = 2.98IDD27 pKa = 4.01SQIKK31 pKa = 9.43HH32 pKa = 5.03WMLLRR37 pKa = 11.84KK38 pKa = 9.6EE39 pKa = 4.22YY40 pKa = 10.49VIHH43 pKa = 6.43YY44 pKa = 6.79YY45 pKa = 10.95ARR47 pKa = 11.84ANSISRR53 pKa = 11.84LGYY56 pKa = 10.19QNILTQQVAQAKK68 pKa = 8.15AHH70 pKa = 5.74EE71 pKa = 4.93AIEE74 pKa = 4.16MVLNLEE80 pKa = 4.24TLKK83 pKa = 10.91ASPYY87 pKa = 10.42GAEE90 pKa = 3.88QWTLAQTSRR99 pKa = 11.84EE100 pKa = 3.98LWLTPPKK107 pKa = 10.58HH108 pKa = 6.02CFKK111 pKa = 11.04KK112 pKa = 10.29EE113 pKa = 3.66GSTVEE118 pKa = 3.64VWFDD122 pKa = 3.46GRR124 pKa = 11.84KK125 pKa = 9.93DD126 pKa = 3.51NAMHH130 pKa = 5.02YY131 pKa = 6.87TAWDD135 pKa = 3.65KK136 pKa = 10.91IYY138 pKa = 10.72YY139 pKa = 7.67QTDD142 pKa = 3.66SAWIKK147 pKa = 9.81TDD149 pKa = 2.81GHH151 pKa = 7.13VDD153 pKa = 3.38YY154 pKa = 10.84DD155 pKa = 3.65GCFYY159 pKa = 11.55YY160 pKa = 10.61EE161 pKa = 4.03GTYY164 pKa = 8.91KK165 pKa = 10.3HH166 pKa = 6.54YY167 pKa = 10.64YY168 pKa = 9.78IKK170 pKa = 10.61FQEE173 pKa = 4.65DD174 pKa = 3.18ADD176 pKa = 4.45KK177 pKa = 11.36YY178 pKa = 9.22SQSGDD183 pKa = 3.08WEE185 pKa = 4.5VHH187 pKa = 5.56FKK189 pKa = 10.66HH190 pKa = 6.74HH191 pKa = 6.08VFSPVASVSSTTDD204 pKa = 2.99GDD206 pKa = 4.11PDD208 pKa = 4.08PEE210 pKa = 5.86CGLRR214 pKa = 11.84ADD216 pKa = 3.72VQRR219 pKa = 11.84RR220 pKa = 11.84VPEE223 pKa = 3.91QHH225 pKa = 6.38QVPLDD230 pKa = 3.66NQATPRR236 pKa = 11.84KK237 pKa = 9.23RR238 pKa = 11.84RR239 pKa = 11.84RR240 pKa = 11.84DD241 pKa = 3.52EE242 pKa = 4.15TGGDD246 pKa = 3.42PAGPCTPRR254 pKa = 11.84RR255 pKa = 11.84KK256 pKa = 10.05ARR258 pKa = 11.84GDD260 pKa = 3.5RR261 pKa = 11.84CPHH264 pKa = 5.73SRR266 pKa = 11.84DD267 pKa = 3.06TRR269 pKa = 11.84GRR271 pKa = 11.84RR272 pKa = 11.84RR273 pKa = 11.84GRR275 pKa = 11.84DD276 pKa = 2.87RR277 pKa = 11.84GGGRR281 pKa = 11.84GGRR284 pKa = 11.84RR285 pKa = 11.84QRR287 pKa = 11.84RR288 pKa = 11.84EE289 pKa = 3.38GDD291 pKa = 3.43SEE293 pKa = 3.93EE294 pKa = 4.32RR295 pKa = 11.84QSQTEE300 pKa = 3.97DD301 pKa = 3.35SPDD304 pKa = 3.34EE305 pKa = 4.21RR306 pKa = 11.84FHH308 pKa = 7.1PGLTAAQQHH317 pKa = 5.63GQRR320 pKa = 11.84QRR322 pKa = 11.84TTAEE326 pKa = 4.16EE327 pKa = 4.68DD328 pKa = 3.37PHH330 pKa = 8.05SAAPLYY336 pKa = 10.23RR337 pKa = 11.84QEE339 pKa = 4.11EE340 pKa = 4.46GDD342 pKa = 3.4RR343 pKa = 11.84GEE345 pKa = 4.38ARR347 pKa = 11.84QPYY350 pKa = 8.57GSPRR354 pKa = 11.84IPEE357 pKa = 4.08EE358 pKa = 3.84PAQQIDD364 pKa = 4.13PNQLPRR370 pKa = 11.84VRR372 pKa = 11.84RR373 pKa = 11.84QPARR377 pKa = 11.84ILDD380 pKa = 3.91HH381 pKa = 7.06LADD384 pKa = 4.03TPILLLRR391 pKa = 11.84GGANQLKK398 pKa = 9.58CYY400 pKa = 10.27RR401 pKa = 11.84YY402 pKa = 9.85RR403 pKa = 11.84LLKK406 pKa = 10.81NYY408 pKa = 9.71FNLFLDD414 pKa = 5.17ISKK417 pKa = 7.8TWQWIGAGGIGNKK430 pKa = 9.79ARR432 pKa = 11.84VTVAFEE438 pKa = 4.18SLAQRR443 pKa = 11.84NQFLNTVPIPTGVTVAWGRR462 pKa = 11.84ISGLL466 pKa = 3.48

Molecular weight: 53.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2331

91

615

388.5

43.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.792 ± 0.73

2.402 ± 0.989

6.607 ± 0.309

6.349 ± 0.476

3.647 ± 0.436

6.65 ± 1.07

2.059 ± 0.582

4.59 ± 0.645

4.805 ± 0.57

8.237 ± 0.868

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.63 ± 0.545

4.505 ± 0.531

5.792 ± 1.078

5.234 ± 0.854

6.607 ± 0.82

6.735 ± 0.793

6.392 ± 1.064

6.392 ± 0.967

1.673 ± 0.461

3.904 ± 0.386
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski