Priestia koreensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Priestia

Average proteome isoelectric point is 6.42

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4402 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0M0KWW1|A0A0M0KWW1_9BACI FeoA domain-containing protein OS=Priestia koreensis OX=284581 GN=AMD01_17175 PE=4 SV=1
MM1 pKa = 7.81EE2 pKa = 4.64YY3 pKa = 10.77SGMASVWFGVSKK15 pKa = 10.84SFEE18 pKa = 4.06NLKK21 pKa = 10.44EE22 pKa = 4.08YY23 pKa = 11.32VDD25 pKa = 3.73IEE27 pKa = 4.25YY28 pKa = 10.22TEE30 pKa = 5.35DD31 pKa = 3.67GDD33 pKa = 5.61SIDD36 pKa = 4.93SKK38 pKa = 11.14FGTNFEE44 pKa = 4.01FGYY47 pKa = 10.51YY48 pKa = 10.33DD49 pKa = 3.61EE50 pKa = 6.29DD51 pKa = 4.18NIEE54 pKa = 3.67ICFYY58 pKa = 10.9EE59 pKa = 4.2NPKK62 pKa = 10.99NNVDD66 pKa = 5.2DD67 pKa = 4.01ILNDD71 pKa = 3.8FSYY74 pKa = 11.27SEE76 pKa = 4.84LIIPKK81 pKa = 9.76IKK83 pKa = 10.43EE84 pKa = 4.26LINGDD89 pKa = 3.38KK90 pKa = 10.46LAYY93 pKa = 9.97SINSVIVLYY102 pKa = 10.56DD103 pKa = 3.31FQYY106 pKa = 11.56NEE108 pKa = 4.41AKK110 pKa = 10.71SGDD113 pKa = 3.55EE114 pKa = 4.31SEE116 pKa = 4.47NIEE119 pKa = 3.87IKK121 pKa = 10.85FIGTVPYY128 pKa = 10.26KK129 pKa = 10.86

Molecular weight: 14.94 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0M0L5N4|A0A0M0L5N4_9BACI Uncharacterized protein OS=Priestia koreensis OX=284581 GN=AMD01_11135 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.42RR3 pKa = 11.84TYY5 pKa = 10.34QPNKK9 pKa = 8.21RR10 pKa = 11.84KK11 pKa = 9.62RR12 pKa = 11.84SKK14 pKa = 9.59VHH16 pKa = 5.83GFRR19 pKa = 11.84SRR21 pKa = 11.84MSSANGRR28 pKa = 11.84KK29 pKa = 8.82VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 9.05GRR39 pKa = 11.84KK40 pKa = 8.7VLSAA44 pKa = 4.05

Molecular weight: 5.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4402

0

4402

1238965

26

4886

281.5

31.62

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.991 ± 0.038

0.71 ± 0.012

5.082 ± 0.029

7.259 ± 0.051

4.459 ± 0.029

6.769 ± 0.036

2.334 ± 0.021

7.334 ± 0.044

6.813 ± 0.041

9.829 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.76 ± 0.02

4.112 ± 0.035

3.594 ± 0.026

4.019 ± 0.026

4.101 ± 0.029

6.174 ± 0.031

5.64 ± 0.048

7.363 ± 0.031

1.031 ± 0.013

3.626 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski