Idotea virus IWaV278

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses; Cruciviridae

Average proteome isoelectric point is 6.22

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2H4YQ33|A0A2H4YQ33_9VIRU Putative capsid protein OS=Idotea virus IWaV278 OX=2058759 PE=3 SV=1
MM1 pKa = 7.8PNGSKK6 pKa = 10.39RR7 pKa = 11.84FCFTHH12 pKa = 6.69FGCPDD17 pKa = 3.45EE18 pKa = 4.47FTNILQARR26 pKa = 11.84SPLCTKK32 pKa = 10.02WIVQQEE38 pKa = 4.05RR39 pKa = 11.84GQAEE43 pKa = 4.18GKK45 pKa = 10.69APLEE49 pKa = 4.28GANAQNGGLHH59 pKa = 5.58LQGYY63 pKa = 8.22IHH65 pKa = 6.8TKK67 pKa = 9.58RR68 pKa = 11.84VYY70 pKa = 10.13TFAQFLRR77 pKa = 11.84IWPVSHH83 pKa = 7.09VEE85 pKa = 3.79AAQGTEE91 pKa = 3.73AQNYY95 pKa = 7.44LYY97 pKa = 10.39CRR99 pKa = 11.84KK100 pKa = 10.2NEE102 pKa = 4.13TFTGKK107 pKa = 10.14YY108 pKa = 8.15RR109 pKa = 11.84LAMEE113 pKa = 4.65GSVWSRR119 pKa = 11.84DD120 pKa = 3.75VQRR123 pKa = 11.84LQAKK127 pKa = 8.34SRR129 pKa = 11.84KK130 pKa = 8.39DD131 pKa = 3.46AEE133 pKa = 4.06MQAIVDD139 pKa = 4.45KK140 pKa = 10.39IKK142 pKa = 10.88QGATTADD149 pKa = 3.02IARR152 pKa = 11.84NNTAYY157 pKa = 10.58FIRR160 pKa = 11.84HH161 pKa = 6.12CNGIPAAVRR170 pKa = 11.84HH171 pKa = 5.81HH172 pKa = 6.3QPAAPATRR180 pKa = 11.84PVHH183 pKa = 6.42VILLKK188 pKa = 10.93GSTGTGKK195 pKa = 10.6SYY197 pKa = 9.83WARR200 pKa = 11.84QLATYY205 pKa = 7.99QRR207 pKa = 11.84KK208 pKa = 8.81RR209 pKa = 11.84LYY211 pKa = 10.36CKK213 pKa = 10.32QIQQDD218 pKa = 3.54TDD220 pKa = 3.83TQWFDD225 pKa = 3.66GYY227 pKa = 11.02DD228 pKa = 3.53GQEE231 pKa = 3.8ILLLDD236 pKa = 3.92DD237 pKa = 5.19FGRR240 pKa = 11.84KK241 pKa = 8.7QIGYY245 pKa = 8.59RR246 pKa = 11.84QLLTYY251 pKa = 10.66LDD253 pKa = 3.85IYY255 pKa = 10.18ALKK258 pKa = 10.56VQIKK262 pKa = 10.16GDD264 pKa = 3.69TVDD267 pKa = 4.28ARR269 pKa = 11.84WNYY272 pKa = 10.22VIITTNEE279 pKa = 4.31EE280 pKa = 3.64IQEE283 pKa = 4.14WYY285 pKa = 9.46PNEE288 pKa = 5.25DD289 pKa = 2.83IAPLRR294 pKa = 11.84RR295 pKa = 11.84RR296 pKa = 11.84IAKK299 pKa = 9.03IHH301 pKa = 5.52EE302 pKa = 4.68CNRR305 pKa = 11.84PWAVDD310 pKa = 3.36YY311 pKa = 11.76VDD313 pKa = 5.28FKK315 pKa = 11.41RR316 pKa = 11.84PLPVPVVPQFVLPPEE331 pKa = 4.5PEE333 pKa = 3.88GKK335 pKa = 10.35YY336 pKa = 9.37PQPEE340 pKa = 4.3PNQQAHH346 pKa = 6.63AVPIVDD352 pKa = 3.37EE353 pKa = 4.45VEE355 pKa = 4.36YY356 pKa = 10.83EE357 pKa = 4.06DD358 pKa = 4.72LVPVEE363 pKa = 5.59DD364 pKa = 4.99LDD366 pKa = 5.33ADD368 pKa = 4.01ALIDD372 pKa = 4.63EE373 pKa = 5.05INAEE377 pKa = 4.25LGAIEE382 pKa = 5.21DD383 pKa = 4.11PPDD386 pKa = 3.93FEE388 pKa = 4.65MADD391 pKa = 3.53LGHH394 pKa = 6.66LVWRR398 pKa = 11.84PMM400 pKa = 3.63

Molecular weight: 45.79 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2H4YQ33|A0A2H4YQ33_9VIRU Putative capsid protein OS=Idotea virus IWaV278 OX=2058759 PE=3 SV=1
MM1 pKa = 7.12SKK3 pKa = 10.12KK4 pKa = 10.29RR5 pKa = 11.84KK6 pKa = 7.03TVTGGGSRR14 pKa = 11.84RR15 pKa = 11.84STGVPYY21 pKa = 9.86WQMKK25 pKa = 9.4AARR28 pKa = 11.84QYY30 pKa = 11.0RR31 pKa = 11.84DD32 pKa = 3.97DD33 pKa = 4.67YY34 pKa = 9.34MAEE37 pKa = 4.07YY38 pKa = 9.5PRR40 pKa = 11.84GSAASKK46 pKa = 11.05AMWGDD51 pKa = 3.87DD52 pKa = 3.37YY53 pKa = 11.82KK54 pKa = 11.23SASKK58 pKa = 9.95RR59 pKa = 11.84QRR61 pKa = 11.84YY62 pKa = 8.14LRR64 pKa = 11.84NAMRR68 pKa = 11.84FKK70 pKa = 11.33GKK72 pKa = 10.28GKK74 pKa = 10.48YY75 pKa = 8.02SAKK78 pKa = 10.54NFGRR82 pKa = 11.84DD83 pKa = 3.0ALRR86 pKa = 11.84YY87 pKa = 9.76GGAALGGGIGYY98 pKa = 7.44MTGGLAGAGAMAQRR112 pKa = 11.84GYY114 pKa = 9.8DD115 pKa = 3.22TGADD119 pKa = 3.35LSRR122 pKa = 11.84FVGFGEE128 pKa = 4.16YY129 pKa = 9.94KK130 pKa = 10.55GANQLIAGPEE140 pKa = 3.9QNMSITVNRR149 pKa = 11.84EE150 pKa = 3.44HH151 pKa = 7.58RR152 pKa = 11.84SGDD155 pKa = 3.01IVFANTEE162 pKa = 4.11FVQNVYY168 pKa = 10.97AGVTSGPSTSKK179 pKa = 10.55FQTQAFSLNPGLGEE193 pKa = 4.06TFPFLSQIAQNFEE206 pKa = 4.02LFEE209 pKa = 4.27FEE211 pKa = 5.18GLMFEE216 pKa = 4.55YY217 pKa = 10.41KK218 pKa = 8.85PTSGEE223 pKa = 4.01FGTTSSNSLGKK234 pKa = 10.44VVMCTNYY241 pKa = 10.59DD242 pKa = 3.39PEE244 pKa = 5.68APEE247 pKa = 4.19FQNSVQMEE255 pKa = 4.32NYY257 pKa = 10.33DD258 pKa = 3.73YY259 pKa = 11.84ANSTKK264 pKa = 9.92PSRR267 pKa = 11.84GAIHH271 pKa = 6.63GVEE274 pKa = 3.97THH276 pKa = 6.87PDD278 pKa = 3.01QRR280 pKa = 11.84ATKK283 pKa = 10.14LMYY286 pKa = 10.62VRR288 pKa = 11.84TGDD291 pKa = 3.57ANKK294 pKa = 10.75SKK296 pKa = 10.86LFTDD300 pKa = 4.46LGTLHH305 pKa = 7.55LATEE309 pKa = 5.05GVPFGGDD316 pKa = 3.31GQQKK320 pKa = 10.75ALIGEE325 pKa = 4.29LWVTYY330 pKa = 9.81KK331 pKa = 10.57VRR333 pKa = 11.84LSRR336 pKa = 11.84SQLYY340 pKa = 10.83SSVLGNNVITSYY352 pKa = 11.28QSGTSDD358 pKa = 3.15SGVWTGTKK366 pKa = 10.04QFDD369 pKa = 4.03SNTWDD374 pKa = 3.05MSLTNVSQGVFKK386 pKa = 9.86FTLPEE391 pKa = 4.27DD392 pKa = 3.84VDD394 pKa = 4.29DD395 pKa = 5.25GSFLVTISNSSTGTHH410 pKa = 5.17TMSPLEE416 pKa = 4.04FTLEE420 pKa = 3.83NCKK423 pKa = 8.69FTKK426 pKa = 10.0TPVAIAPPPSQVQGWNRR443 pKa = 11.84TYY445 pKa = 11.36LMKK448 pKa = 10.45VDD450 pKa = 3.99AQSALNICSFQFDD463 pKa = 4.71DD464 pKa = 5.77PDD466 pKa = 4.75SNWPNGSWQVGITQVSDD483 pKa = 3.0KK484 pKa = 11.28LYY486 pKa = 10.83DD487 pKa = 3.1EE488 pKa = 4.48WAAFSGEE495 pKa = 4.04LPAA498 pKa = 6.55

Molecular weight: 54.56 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

898

400

498

449.0

50.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.129 ± 0.536

1.114 ± 0.392

5.791 ± 0.437

5.345 ± 0.711

4.454 ± 0.742

8.686 ± 1.654

1.782 ± 0.596

4.12 ± 1.311

5.234 ± 0.144

6.682 ± 0.35

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.227 ± 0.602

4.454 ± 0.434

5.345 ± 0.865

6.125 ± 0.693

5.345 ± 0.711

6.125 ± 2.54

6.682 ± 0.881

5.902 ± 0.214

2.004 ± 0.151

4.454 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski